AAL86774 (Xenopus laevis)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03165 (MH1) IPR003619 AAL86774 T325386_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SMAD9
M11274_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_01 		0.971 0.971
Smad9
M11290_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_02 		0.971 0.971
Smad9
M11289_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_03 		0.971 0.971
SMAD1
M11286_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD1_01 		0.941 0.941
SMAD1
M11287_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD1_Q6 		0.941 0.941
Smad5
M11288_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD5_01 		0.922 0.922
Smad5
M11292_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD5_03 		0.922 0.922
Mad
M06446_2.00 		Drosophila melanogaster
GYGHCGBCVS
SBGVCGDCRC		 B1H
Zhu et al.(2011)
Mad_FlyReg_FBgn0011648 		0.902 0.902
Mad
M08427_2.00 		Drosophila melanogaster
SNGRCGMSRVSRBNS
SNVYSBYSKCGYCNS		 ChIP-chip
Mathelier et al.(2014)
MA0535.1 		0.902 0.902
Mad
M09692_2.00 		Drosophila melanogaster
KCBGSHGKCGCSNC
GNSGCGMCDSCVGM		 Misc
Kulakovskiy et al.(2009)
Mad 		0.902 0.902
Mad
M11293_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$MAD_Q6 		0.902 0.902
Smad3
M00192_2.00 		Mus musculus
NNNNNMGMCN
NGKCKNNNNN		 PBM
Badis et al.(2009)
Smad3_3805 		0.706 0.706
SMAD3
M03482_2.00 		Homo sapiens
YGTCTAGACA
TGTCTAGACR		 SELEX
Jolma et al.(2013)
SMAD3_1 		0.706 0.706
SMAD3
M09380_2.00 		Homo sapiens
NBCTSHCWSCWB
VWGSWGDSAGVN		 Misc
Kulakovskiy et al.(2013)
SMAD3_HUMAN.H11MO.0.B 		0.706 0.706
Smad3
M09384_2.00 		Mus musculus
NBCTSHCWSCWB
VWGSWGDSAGVN		 Misc
Kulakovskiy et al.(2013)
SMAD3_MOUSE.H11MO.0.B 		0.706 0.706
Smad3
M09637_2.00 		Mus musculus
BYAGMCWN
NWGKCTRV		 Misc
Heinz et al.(2010)
NPC-Smad3_GSE36673 		0.706 0.706
SMAD3
M11283_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6_01 		0.706 0.706
SMAD3
M11284_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6_02 		0.706 0.706
SMAD3
M11285_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6 		0.706 0.706
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAL86774 SMAD 34 135

Links

Other SMAD family TFs
Other Xenopus laevis TFs

438 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29216.m000249 Ricinus communis 29216.m000249 I 0.000
30131.m007163 Ricinus communis 30131.m007163 I 0.000
AMTR_s00010p00030830 Amborella trichopoda AMTR_s00010p00030830 I 0.000
AMTR_s00022p00217850 Amborella trichopoda AMTR_s00022p00217850 I 0.000
AMTR_s00095p00059370 Amborella trichopoda AMTR_s00095p00059370 I 0.000
Aquca_004_00791 Aquilegia coerulea Aquca_004_00791 I 0.000
Aquca_009_00172 Aquilegia coerulea Aquca_009_00172 I 0.000
Aquca_009_00424 Aquilegia coerulea Aquca_009_00424 I 0.000
TGA9 Arabidopsis thaliana AT1G08320 D 0.000
TGA6 Arabidopsis thaliana AT3G12250 D 0.000
TGA2 Arabidopsis thaliana AT5G06950 D 0.000
TGA5 Arabidopsis thaliana AT5G06960 D 0.000
BGIOSGA003265 Oryza indica BGIOSGA003265 I 0.000
BGIOSGA007726 Oryza indica BGIOSGA007726 I 0.000
Bo1g139470 Brassica oleracea Bo1g139470 I 0.000
Bo2g007460 Brassica oleracea Bo2g007460 I 0.000
Bo3g064830 Brassica oleracea Bo3g064830 I 0.000
Bo5g008940 Brassica oleracea Bo5g008940 I 0.000
Bo5g133550 Brassica oleracea Bo5g133550 I 0.000
Bo8g112540 Brassica oleracea Bo8g112540 I 0.000
Bo9g175710 Brassica oleracea Bo9g175710 I 0.000
Bostr.13129s0278 Boechera stricta Bostr.13129s0278 I 0.000
Bostr.13129s0279 Boechera stricta Bostr.13129s0279 I 0.000
Bostr.25219s0112 Boechera stricta Bostr.25219s0112 I 0.000
Bostr.3640s0002 Boechera stricta Bostr.3640s0002 I 0.000
Bra001443 Brassica rapa Bra001443 I 0.000
Bra009241 Brassica rapa Bra009241 I 0.000
Bra018634 Brassica rapa Bra018634 I 0.000
Bra028713 Brassica rapa Bra028713 I 0.000
Bra031622 Brassica rapa Bra031622 I 0.000
Bra034767 Brassica rapa Bra034767 I 0.000
Bra038705 Brassica rapa Bra038705 I 0.000
BRADI2G10830 Brachypodium distachyon BRADI2G10830 I 0.000
Cagra.0430s0055 Capsella grandiflora Cagra.0430s0055 I 0.000
Cagra.16209s0003 Capsella grandiflora Cagra.16209s0003 I 0.000
Cagra.16209s0004 Capsella grandiflora Cagra.16209s0004 I 0.000
Cagra.4395s0022 Capsella grandiflora Cagra.4395s0022 I 0.000
Carubv10001409m.g Capsella rubella Carubv10001409m.g I 0.000
Carubv10001413m.g Capsella rubella Carubv10001413m.g I 0.000
Carubv10011576m.g Capsella rubella Carubv10011576m.g I 0.000
cassava1426.valid.m1 Manihot esculenta cassava1426.valid.m1 I 0.000
cassava1427.valid.m1 Manihot esculenta cassava1427.valid.m1 I 0.000
cassava22236.valid.m1 Manihot esculenta cassava22236.valid.m1 I 0.000
cassava22237.valid.m1 Manihot esculenta cassava22237.valid.m1 I 0.000
cassava6928.valid.m1 Manihot esculenta cassava6928.valid.m1 I 0.000
Ca_07170 Cicer arietinum Ca_07170 I 0.000
Ca_07292 Cicer arietinum Ca_07292 N 0.000
Ca_10901 Cicer arietinum Ca_10901 I 0.000
Ca_17971 Cicer arietinum Ca_17971 I 0.000
chr1.CM0009.80.nd Lotus japonicus chr1.CM0009.80.nd I 0.000
Ciclev10001081m.g Citrus clementina Ciclev10001081m.g I 0.000
Ciclev10005080m.g Citrus clementina Ciclev10005080m.g I 0.000
Ciclev10028428m.g Citrus clementina Ciclev10028428m.g I 0.000
Ciclev10031361m.g Citrus clementina Ciclev10031361m.g I 0.000
Cla002918 Citrullus lanatus Cla002918 I 0.000
Cla010092 Citrullus lanatus Cla010092 I 0.000
Cla017796 Citrullus lanatus Cla017796 I 0.000
Cla022393 Citrullus lanatus Cla022393 I 0.000
Cucsa.005120 Cucumis sativus Cucsa.005120 I 0.000
Cucsa.242870 Cucumis sativus Cucsa.242870 I 0.000
Cucsa.307820 Cucumis sativus Cucsa.307820 I 0.000
Cucsa.337740 Cucumis sativus Cucsa.337740 I 0.000
estExt_gwp_gw1.C_1260170 Physcomitrella patens estExt_gwp_gw1.C_1260170 N 0.000
Eucgr.A02240 Eucalyptus grandis Eucgr.A02240 I 0.000
Eucgr.A02436 Eucalyptus grandis Eucgr.A02436 I 0.000
Eucgr.G03217 Eucalyptus grandis Eucgr.G03217 I 0.000
Eucgr.K01643 Eucalyptus grandis Eucgr.K01643 I 0.000
evm.TU.supercontig_1.202 Carica papaya evm.TU.supercontig_1.202 I 0.000
evm.TU.supercontig_5.165 Carica papaya evm.TU.supercontig_5.165 I 0.000
evm.TU.supercontig_847.1 Carica papaya evm.TU.supercontig_847.1 I 0.000
evm.TU.supercontig_85.93 Carica papaya evm.TU.supercontig_85.93 I 0.000
fgenesh1_pg.scaffold_30000177 Physcomitrella patens fgenesh1_pg.scaffold_30000177 N 0.000
fgenesh1_pm.C_scaffold_1000665 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1000665 I 0.000
fgenesh1_pm.scaffold_257000017 Physcomitrella patens fgenesh1_pm.scaffold_257000017 N 0.000
TGA6 Arabidopsis lyrata fgenesh2_kg.3__1288__AT3G12250.4 I 0.000
OBF5 Arabidopsis lyrata fgenesh2_kg.6__648__AT5G06960.1 I 0.000
gene00517-v1.0-hybrid Fragaria vesca gene00517-v1.0-hybrid I 0.000
gene14220-v1.0-hybrid Fragaria vesca gene14220-v1.0-hybrid I 0.000
gene21882-v1.0-hybrid Fragaria vesca gene21882-v1.0-hybrid I 0.000
GLYMA02G30220 Glycine max GLYMA02G30220 I 0.000
GLYMA03G28320 Glycine max GLYMA03G28320 I 0.000
GLYMA10G11985 Glycine max GLYMA10G11985 I 0.000
GLYMA12G30990 Glycine max GLYMA12G30990 I 0.000
GLYMA13G26280 Glycine max GLYMA13G26280 I 0.000
GLYMA15G37220 Glycine max GLYMA15G37220 I 0.000
GLYMA19G31050 Glycine max GLYMA19G31050 I 0.000
GLYMA20G39050 Glycine max GLYMA20G39050 I 0.000
Gorai.001G122100 Gossypium raimondii Gorai.001G122100 I 0.000
Gorai.002G228200 Gossypium raimondii Gorai.002G228200 I 0.000
Gorai.006G141000 Gossypium raimondii Gorai.006G141000 I 0.000
Gorai.007G352600 Gossypium raimondii Gorai.007G352600 I 0.000
Gorai.008G185000 Gossypium raimondii Gorai.008G185000 I 0.000
Gorai.011G217200 Gossypium raimondii Gorai.011G217200 I 0.000
Gorai.013G001700 Gossypium raimondii Gorai.013G001700 I 0.000
Gorai.013G081100 Gossypium raimondii Gorai.013G081100 I 0.000
GRMZM2G019907 Zea mays GRMZM2G019907 I 0.000
GRMZM2G030280 Zea mays GRMZM2G030280 I 0.000
GRMZM2G125243 Zea mays GRMZM2G125243 I 0.000
GSMUA_Achr10G00340_001 Musa acuminata GSMUA_Achr10G00340_001 I 0.000
GSMUA_Achr11G25140_001 Musa acuminata GSMUA_Achr11G25140_001 I 0.000
GSMUA_Achr3G11150_001 Musa acuminata GSMUA_Achr3G11150_001 I 0.000
GSMUA_Achr3G25020_001 Musa acuminata GSMUA_Achr3G25020_001 I 0.000
GSMUA_Achr8G05800_001 Musa acuminata GSMUA_Achr8G05800_001 I 0.000
GSMUA_Achr9G27700_001 Musa acuminata GSMUA_Achr9G27700_001 I 0.000
GSMUA_AchrUn_randomG12130_001 Musa acuminata GSMUA_AchrUn_randomG12130_001 I 0.000
HBP1B_WHEAT Triticum aestivum HBP1B_WHEAT D 0.000
LPERR01G10700 Leersia perrieri LPERR01G10700 I 0.000
Lus10008658.g Linum usitatissimum Lus10008658.g I 0.000
Lus10024140.g Linum usitatissimum Lus10024140.g I 0.000
Lus10026166.g Linum usitatissimum Lus10026166.g I 0.000
MDP0000145555 Malus domestica MDP0000145555 I 0.000
MDP0000250967 Malus domestica MDP0000250967 I 0.000
MDP0000262210 Malus domestica MDP0000262210 I 0.000
MDP0000300532 Malus domestica MDP0000300532 I 0.000
MDP0000301884 Malus domestica MDP0000301884 I 0.000
MDP0000307943 Malus domestica MDP0000307943 I 0.000
MDP0000320322 Malus domestica MDP0000320322 I 0.000
MDP0000320524 Malus domestica MDP0000320524 I 0.000
MDP0000536881 Malus domestica MDP0000536881 I 0.000
mgf005858m Mimulus guttatus mgf005858m I 0.000
mgf025345m Mimulus guttatus mgf025345m I 0.000
MTR_0126s0080 Medicago truncatula MTR_0126s0080 I 0.000
MTR_7g089800 Medicago truncatula MTR_7g089800 I 0.000
MTR_8g040120 Medicago truncatula MTR_8g040120 I 0.000
OB01G21470 Oryza brachyantha OB01G21470 I 0.000
OB01G43330 Oryza brachyantha OB01G43330 I 0.000
OB05G28710 Oryza brachyantha OB05G28710 N 0.000
OBART01G11380 Oryza barthii OBART01G11380 I 0.000
OBART02G07230 Oryza barthii OBART02G07230 I 0.000
OGLUM02G07240 Oryza glumaepatula OGLUM02G07240 I 0.000
OLONG_010393 Oryza longistaminata OLONG_010393 I 0.000
OMERI02G08300 Oryza meridionalis OMERI02G08300 I 0.000
ONIVA01G13810 Oryza nivara ONIVA01G13810 I 0.000
ONIVA02G08860 Oryza nivara ONIVA02G08860 I 0.000
OPUNC01G11270 Oryza punctata OPUNC01G11270 I 0.000
OPUNC02G06400 Oryza punctata OPUNC02G06400 I 0.000
orange1.1g015258m.g Citrus sinensis orange1.1g015258m.g I 0.000
orange1.1g036039m.g Citrus sinensis orange1.1g036039m.g I 0.000
orange1.1g038233m.g Citrus sinensis orange1.1g038233m.g I 0.000
orange1.1g045786m.g Citrus sinensis orange1.1g045786m.g I 0.000
ORGLA02G0067600 Oryza glaberrima ORGLA02G0067600 I 0.000
ORUFI01G12420 Oryza rufipogon ORUFI01G12420 I 0.000
TGA2.3 Oryza sativa OS01G0279900 I 0.000
OS02G0194900 Oryza sativa OS02G0194900 I 0.000
Pavir.Eb01160 Panicum virgatum Pavir.Eb01160 I 0.000
Pavir.Eb03507 Panicum virgatum Pavir.Eb03507 I 0.000
Pavir.J04905 Panicum virgatum Pavir.J04905 I 0.000
Pavir.J27823 Panicum virgatum Pavir.J27823 I 0.000
PGSC0003DMG400009449 Solanum tuberosum PGSC0003DMG400009449 I 0.000
PGSC0003DMG400012962 Solanum tuberosum PGSC0003DMG400012962 I 0.000
PK08582.1 Cannabis sativa PK08582.1 I 0.000
PK09021.1 Cannabis sativa PK09021.1 D 0.000
PK13754.1 Cannabis sativa PK13754.1 I 0.000
PK21698.1 Cannabis sativa PK21698.1 I 0.000
Pm016643 Prunus mume Pm016643 I 0.000
Pm025995 Prunus mume Pm025995 I 0.000
Pm028917 Prunus mume Pm028917 I 0.000
Pm029028 Prunus mume Pm029028 I 0.000
POPTR_0001s06700 Populus trichocarpa POPTR_0001s06700 I 0.000
POPTR_0003s19410 Populus trichocarpa POPTR_0003s19410 I 0.000
POPTR_0006s03720 Populus trichocarpa POPTR_0006s03720 I 0.000
PAN Populus trichocarpa POPTR_0008s11710 I 0.000
POPTR_0016s03590 Populus trichocarpa POPTR_0016s03590 I 0.000
PRUPE_ppa003825mg Prunus persica PRUPE_ppa003825mg I 0.000
PRUPE_ppa005279mg Prunus persica PRUPE_ppa005279mg I 0.000
PRUPE_ppa019842mg Prunus persica PRUPE_ppa019842mg I 0.000
SapurV1A.0009s1200 Salix purpurea SapurV1A.0009s1200 I 0.000
SapurV1A.0079s0330 Salix purpurea SapurV1A.0079s0330 I 0.000
SapurV1A.0189s0240 Salix purpurea SapurV1A.0189s0240 I 0.000
SapurV1A.0196s0260 Salix purpurea SapurV1A.0196s0260 I 0.000
SapurV1A.0574s0080 Salix purpurea SapurV1A.0574s0080 I 0.000
SapurV1A.1761s0020 Salix purpurea SapurV1A.1761s0020 I 0.000
Sb03g006790 Sorghum bicolor Sb03g006790 I 0.000
Sb03g037560 Sorghum bicolor Sb03g037560 I 0.000
SELMODRAFT_231160 Selaginella moellendorffii SELMODRAFT_231160 N 0.000
Si001292m.g Setaria italica Si001292m.g I 0.000
Si002195m.g Setaria italica Si002195m.g I 0.000
Solyc05g009660.2 Solanum lycopersicum Solyc05g009660.2 I 0.000
Solyc06g074320.2 Solanum lycopersicum Solyc06g074320.2 I 0.000
Solyc11g064950.1 Solanum lycopersicum Solyc11g064950.1 I 0.000
TCM_011845 Theobroma cacao TCM_011845 I 0.000
TCM_023491 Theobroma cacao TCM_023491 I 0.000
TCM_023492 Theobroma cacao TCM_023492 I 0.000
TCM_024862 Theobroma cacao TCM_024862 I 0.000
Thhalv10007490m.g Eutrema salsugineum Thhalv10007490m.g I 0.000
Thhalv10014082m.g Eutrema salsugineum Thhalv10014082m.g I 0.000
Thhalv10021187m.g Eutrema salsugineum Thhalv10021187m.g I 0.000
TRAES3BF003000030CFD_g Triticum aestivum TRAES3BF003000030CFD_g I 0.000
PAN Vitis vinifera VIT_01s0011g03230 I 0.000
VIT_08s0007g05170 Vitis vinifera VIT_08s0007g05170 I 0.000
TGA10 Vitis vinifera VIT_08s0007g06160 I 0.000
VIT_13s0084g00660 Vitis vinifera VIT_13s0084g00660 I 0.000