OFLC_0001382401 (Onchocerca flexuosa)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03165 (MH1) IPR003619 OFLC_0001382401 T325864_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Smad4
M05889_2.00 		Mus musculus
KCYAGACR
YGTCTRGM		 SMiLE-seq
Isakova et al.(2017)
Smad4 		0.873 0.873
Med
M06447_2.00 		Drosophila melanogaster
KCGBCDKKSHVT
ABDSMMHGVCGM		 B1H
Zhu et al.(2011)
Med_FlyReg_FBgn0011655 		0.873 0.873
SMAD4
M09377_2.00 		Homo sapiens
DRGTGNSAGACWN
NWGTCTSNCACYH		 Misc
Kulakovskiy et al.(2013)
SMAD4_HUMAN.H11MO.0.B 		0.873 0.873
Smad4
M09382_2.00 		Mus musculus
DGWGNBAGVCWN
NWGBCTVNCWCH		 Misc
Kulakovskiy et al.(2013)
SMAD4_MOUSE.H11MO.0.A 		0.873 0.873
SMAD4
M09634_2.00 		Homo sapiens
NNNYGTCTGS
SCAGACRNNN		 Misc
Heinz et al.(2010)
ESC-SMAD4_GSE29422 		0.873 0.873
Med
M09693_2.00 		Drosophila melanogaster
YYBYVYCTGYY
RRCAGRBRVRR		 Misc
Kulakovskiy et al.(2009)
Med 		0.873 0.873
SMAD4
M11275_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD4_Q4 		0.873 0.873
SMAD4
M11276_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD4_Q6_01 		0.873 0.873
SMAD4
M11277_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD4_Q6 		0.873 0.873
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OFLC_0001382401-mRNA-1 SMAD 110 212

Links

Other SMAD family TFs
Other Onchocerca flexuosa TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0000147901 Angiostrongylus cantonensis ACAC_0000147901 I
ACOC_0000995801 Angiostrongylus costaricensis ACOC_0000995801 I
ANCCAN_26375 Ancylostoma caninum ANCCAN_26375 I
ANCCEY_00898 Ancylostoma ceylanicum ANCCEY_00898 I
ANCDUO_18427 Ancylostoma duodenale ANCDUO_18427 I
ASIM_0002143001 Anisakis simplex ASIM_0002143001 I
ASU_09163 Ascaris suum ASU_09163 I
Bm7134 Brugia malayi Bm7134 I
BTMF_0001264901 Brugia timori BTMF_0001264901 I
BXY_0595700 Bursaphelenchus xylophilus BXY_0595700 I
CBN05533 Caenorhabditis brenneri CBN05533 I
CRE24477 Caenorhabditis remanei CRE24477 I
DICVIV_03386 Dictyocaulus viviparus DICVIV_03386 I
EEL_0000525201 Elaeophora elaphi EEL_0000525201 I
EVEC_0001194701 Enterobius vermicularis EVEC_0001194701 I
GPLIN_001307100 Globodera pallida GPLIN_001307100 I
HCOI01068300 Haemonchus contortus HCOI01068300 I
HCOI02160700 Haemonchus contortus HCOI02160700 I
HPLM_0000711501 Haemonchus placei HPLM_0000711501 I
L596_g2693 Steinernema carpocapsae L596_g2693 I
L889_g11692 Steinernema feltiae L889_g11692 I
L892_g8723 Steinernema scapterisci L892_g8723 I
L893_g11169 Steinernema glaseri L893_g11169 I
L898_g2249 Steinernema monticolum L898_g2249 I
LOAG_00893 Loa loa LOAG_00893 I
maker-nMf.1.1.scaf00003-augustus-gene-0.28 Meloidogyne floridensis maker-nMf.1.1.scaf00003-augustus-gene-0.28 I
MhA1_Contig45.frz3.gene23 Meloidogyne hapla MhA1_Contig45.frz3.gene23 I
Minc01117 Meloidogyne incognita Minc01117 I
nAv.1.0.1.g08193 Acanthocheilonema viteae nAv.1.0.1.g08193 I
nDi.2.2.2.g00651 Dirofilaria immitis nDi.2.2.2.g00651 I
NECAME_17957 Necator americanus NECAME_17957 I
nLs.2.1.2.g02012 Litomosoides sigmodontis nLs.2.1.2.g02012 I
nOo.2.0.1.g00486 Onchocerca ochengi nOo.2.0.1.g00486 I
OFLC_0000081601 Onchocerca flexuosa OFLC_0000081601 I
PTRK_0000092500 Parastrongyloides trichosuri PTRK_0000092500 I
RSKR_0000225500 Rhabditophanes kr3021 RSKR_0000225500 I
scaffold299-EXSNAP2012.1 Pristionchus exspectatus scaffold299-EXSNAP2012.1 I
SMUV_0000924801 Syphacia muris SMUV_0000924801 I
SPAL_0001350300 Strongyloides papillosus SPAL_0001350300 I
SSTP_0000713800 Strongyloides stercoralis SSTP_0000713800 I
SVE_1815200 Strongyloides venezuelensis SVE_1815200 I
TCLT_0000655501 Thelazia callipaeda TCLT_0000655501 I
TELCIR_18811 Teladorsagia circumcincta TELCIR_18811 I
Y75B8A.6 Caenorhabditis elegans WBGene00013543 D
WBGene00245177 Onchocerca volvulus WBGene00245177 I
WUBG_12123 Wuchereria bancrofti WUBG_12123 I