aug1.126_g21700 (Bigelowiella natans)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 aug1.126_g21700 T326498_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
JGI_V11_146992 Sox 122 187

Links

Other Sox family TFs
Other Bigelowiella natans TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29729.m002369 Ricinus communis 29729.m002369 I 0.000
29915.m000479 Ricinus communis 29915.m000479 I 0.000
AMTR_s00077p00103580 Amborella trichopoda AMTR_s00077p00103580 I 0.000
Aquca_027_00037 Aquilegia coerulea Aquca_027_00037 I 0.000
WRKY46 Arabidopsis thaliana AT2G46400 D 0.000
WRKY70 Arabidopsis thaliana AT3G56400 D 0.000
BGIOSGA012571 Oryza indica BGIOSGA012571 I 0.000
BGIOSGA019621 Oryza indica BGIOSGA019621 I 0.000
BGIOSGA030535 Oryza indica BGIOSGA030535 I 0.000
BGIOSGA040489 Oryza indica BGIOSGA040489 I 0.000
Bo00913s010 Brassica oleracea Bo00913s010 I 0.000
Bo2g024040 Brassica oleracea Bo2g024040 I 0.000
Bo3g039240 Brassica oleracea Bo3g039240 I 0.000
Bo4g009270 Brassica oleracea Bo4g009270 I 0.000
Bo4g101290 Brassica oleracea Bo4g101290 I 0.000
Bo4g190390 Brassica oleracea Bo4g190390 I 0.000
Bo6g071110 Brassica oleracea Bo6g071110 I 0.000
Bo8g090820 Brassica oleracea Bo8g090820 I 0.000
Bostr.13158s0168 Boechera stricta Bostr.13158s0168 I 0.000
Bostr.20505s0112 Boechera stricta Bostr.20505s0112 I 0.000
Bostr.25993s0129 Boechera stricta Bostr.25993s0129 I 0.000
Bostr.26527s0018 Boechera stricta Bostr.26527s0018 I 0.000
Bostr.26959s0259 Boechera stricta Bostr.26959s0259 I 0.000
Bostr.26959s0262 Boechera stricta Bostr.26959s0262 I 0.000
Bra000423 Brassica rapa Bra000423 I 0.000
Bra003239 Brassica rapa Bra003239 I 0.000
Bra004540 Brassica rapa Bra004540 I 0.000
Bra007243 Brassica rapa Bra007243 I 0.000
Bra014426 Brassica rapa Bra014426 I 0.000
Bra014692 Brassica rapa Bra014692 I 0.000
Bra016974 Brassica rapa Bra016974 I 0.000
Bra020196 Brassica rapa Bra020196 I 0.000
Bra020197 Brassica rapa Bra020197 I 0.000
BRADI1G17660 Brachypodium distachyon BRADI1G17660 I 0.000
BRADI1G63220 Brachypodium distachyon BRADI1G63220 I 0.000
BRADI2G30695 Brachypodium distachyon BRADI2G30695 I 0.000
BRADI2G44270 Brachypodium distachyon BRADI2G44270 I 0.000
BRADI3G34850 Brachypodium distachyon BRADI3G34850 I 0.000
BRADI4G28280 Brachypodium distachyon BRADI4G28280 I 0.000
BRADI4G44370 Brachypodium distachyon BRADI4G44370 N 0.000
Cagra.0050s0059 Capsella grandiflora Cagra.0050s0059 I 0.000
Cagra.0483s0080 Capsella grandiflora Cagra.0483s0080 I 0.000
Cagra.0925s0056 Capsella grandiflora Cagra.0925s0056 I 0.000
Cagra.8153s0001 Capsella grandiflora Cagra.8153s0001 I 0.000
Carubv10002472m.g Capsella rubella Carubv10002472m.g I 0.000
Carubv10017349m.g Capsella rubella Carubv10017349m.g I 0.000
Carubv10019489m.g Capsella rubella Carubv10019489m.g I 0.000
Carubv10023578m.g Capsella rubella Carubv10023578m.g I 0.000
cassava23183.valid.m1 Manihot esculenta cassava23183.valid.m1 I 0.000
cassava25180.valid.m1 Manihot esculenta cassava25180.valid.m1 I 0.000
cassava36286.valid.m1 Manihot esculenta cassava36286.valid.m1 I 0.000
cassava43790.valid.m1 Manihot esculenta cassava43790.valid.m1 I 0.000
cassava7524.valid.m1 Manihot esculenta cassava7524.valid.m1 I 0.000
cassava7525.valid.m1 Manihot esculenta cassava7525.valid.m1 I 0.000
Ca_09495 Cicer arietinum Ca_09495 I 0.000
Ca_12915 Cicer arietinum Ca_12915 I 0.000
Ca_18932 Cicer arietinum Ca_18932 I 0.000
Ciclev10012055m.g Citrus clementina Ciclev10012055m.g I 0.000
Ciclev10032192m.g Citrus clementina Ciclev10032192m.g I 0.000
Ciclev10033384m.g Citrus clementina Ciclev10033384m.g I 0.000
Cla007424 Citrullus lanatus Cla007424 I 0.000
Cla018337 Citrullus lanatus Cla018337 I 0.000
Cucsa.143830 Cucumis sativus Cucsa.143830 I 0.000
Cucsa.177060 Cucumis sativus Cucsa.177060 I 0.000
Eucgr.G03145 Eucalyptus grandis Eucgr.G03145 I 0.000
Eucgr.J00106 Eucalyptus grandis Eucgr.J00106 I 0.000
Eucgr.K01289 Eucalyptus grandis Eucgr.K01289 I 0.000
evm.TU.supercontig_19.44 Carica papaya evm.TU.supercontig_19.44 I 0.000
evm.TU.supercontig_86.64 Carica papaya evm.TU.supercontig_86.64 I 0.000
evm.TU.supercontig_86.65 Carica papaya evm.TU.supercontig_86.65 I 0.000
F775_02479 Aegilops tauschii F775_02479 N 0.000
F775_07376 Aegilops tauschii F775_07376 I 0.000
F775_07845 Aegilops tauschii F775_07845 I 0.000
F775_25840 Aegilops tauschii F775_25840 I 0.000
F775_32858 Aegilops tauschii F775_32858 I 0.000
fgenesh1_pm.C_scaffold_5002145 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5002145 I 0.000
WRKY46 Arabidopsis lyrata fgenesh2_kg.4__2854__AT2G46400.1 I 0.000
WRKY70 Arabidopsis lyrata fgenesh2_kg.5__2072__AT3G56400.1 I 0.000
gene13546-v1.0-hybrid Fragaria vesca gene13546-v1.0-hybrid I 0.000
gene13547-v1.0-hybrid Fragaria vesca gene13547-v1.0-hybrid I 0.000
gene13549-v1.0-hybrid Fragaria vesca gene13549-v1.0-hybrid I 0.000
gene13554-v1.0-hybrid Fragaria vesca gene13554-v1.0-hybrid I 0.000
gene21365-v1.0-hybrid Fragaria vesca gene21365-v1.0-hybrid I 0.000
GLYMA03G00460 Glycine max GLYMA03G00460 I 0.000
GLYMA04G40130 Glycine max GLYMA04G40130 I 0.000
GLYMA06G14720 Glycine max GLYMA06G14720 I 0.000
GLYMA09G41050 Glycine max GLYMA09G41050 I 0.000
GLYMA13G34240 Glycine max GLYMA13G34240 I 0.000
GLYMA13G34281 Glycine max GLYMA13G34281 I 0.000
GLYMA16G34590 Glycine max GLYMA16G34590 I 0.000
GLYMA18G44560 Glycine max GLYMA18G44560 I 0.000
Gorai.005G003900 Gossypium raimondii Gorai.005G003900 I 0.000
Gorai.009G292600 Gossypium raimondii Gorai.009G292600 I 0.000
Gorai.010G219200 Gossypium raimondii Gorai.010G219200 I 0.000
Gorai.012G013900 Gossypium raimondii Gorai.012G013900 I 0.000
Gorai.013G008300 Gossypium raimondii Gorai.013G008300 I 0.000
GRMZM2G004060 Zea mays GRMZM2G004060 I 0.000
GRMZM2G025895 Zea mays GRMZM2G025895 I 0.000
GRMZM2G061408 Zea mays GRMZM2G061408 I 0.000
GRMZM2G163418 Zea mays GRMZM2G163418 I 0.000
GSMUA_Achr5G07490_001 Musa acuminata GSMUA_Achr5G07490_001 I 0.000
GSMUA_Achr8G25110_001 Musa acuminata GSMUA_Achr8G25110_001 I 0.000
LjSGA_120786.1 Lotus japonicus LjSGA_120786.1 N 0.000
LPERR05G09130 Leersia perrieri LPERR05G09130 I 0.000
LPERR08G11030 Leersia perrieri LPERR08G11030 I 0.000
LPERR09G04330 Leersia perrieri LPERR09G04330 I 0.000
Lus10025133.g Linum usitatissimum Lus10025133.g I 0.000
Lus10025216.g Linum usitatissimum Lus10025216.g I 0.000
MDP0000175240 Malus domestica MDP0000175240 I 0.000
MDP0000578301 Malus domestica MDP0000578301 I 0.000
MDP0000754989 Malus domestica MDP0000754989 I 0.000
mgf002542m Mimulus guttatus mgf002542m I 0.000
mgf009193m Mimulus guttatus mgf009193m I 0.000
MLOC_5971 Hordeum vulgare MLOC_5971 I 0.000
MLOC_66134 Hordeum vulgare MLOC_66134 I 0.000
MLOC_71897 Hordeum vulgare MLOC_71897 I 0.000
MTR_0002s1250 Medicago truncatula MTR_0002s1250 I 0.000
MTR_2g075610 Medicago truncatula MTR_2g075610 I 0.000
MTR_2g075680 Medicago truncatula MTR_2g075680 I 0.000
MTR_2g075690 Medicago truncatula MTR_2g075690 I 0.000
MTR_2g075750 Medicago truncatula MTR_2g075750 I 0.000
MTR_7g073380 Medicago truncatula MTR_7g073380 I 0.000
MTR_7g073430 Medicago truncatula MTR_7g073430 I 0.000
MTR_8g005750 Medicago truncatula MTR_8g005750 I 0.000
MTR_8g032510 Medicago truncatula MTR_8g032510 N 0.000
OB03G26140 Oryza brachyantha OB03G26140 I 0.000
OB05G17240 Oryza brachyantha OB05G17240 I 0.000
OBART03G16400 Oryza barthii OBART03G16400 I 0.000
OBART05G11710 Oryza barthii OBART05G11710 I 0.000
OGLUM03G16780 Oryza glumaepatula OGLUM03G16780 I 0.000
OGLUM05G12430 Oryza glumaepatula OGLUM05G12430 I 0.000
OGLUM07G10380 Oryza glumaepatula OGLUM07G10380 I 0.000
OLONG_024544 Oryza longistaminata OLONG_024544 I 0.000
OMERI03G14670 Oryza meridionalis OMERI03G14670 I 0.000
OMERI05G10380 Oryza meridionalis OMERI05G10380 I 0.000
OMERI08G11390 Oryza meridionalis OMERI08G11390 I 0.000
ONIVA03G17390 Oryza nivara ONIVA03G17390 I 0.000
ONIVA05G12100 Oryza nivara ONIVA05G12100 I 0.000
ONIVA08G13920 Oryza nivara ONIVA08G13920 I 0.000
ONIVA09G05410 Oryza nivara ONIVA09G05410 I 0.000
OPUNC05G10020 Oryza punctata OPUNC05G10020 I 0.000
orange1.1g018407m.g Citrus sinensis orange1.1g018407m.g I 0.000
orange1.1g020291m.g Citrus sinensis orange1.1g020291m.g I 0.000
orange1.1g021598m.g Citrus sinensis orange1.1g021598m.g I 0.000
ORGLA05G0099400 Oryza glaberrima ORGLA05G0099400 I 0.000
ORGLA08G0116200 Oryza glaberrima ORGLA08G0116200 I 0.000
ORUFI03G16960 Oryza rufipogon ORUFI03G16960 I 0.000
ORUFI05G12710 Oryza rufipogon ORUFI05G12710 I 0.000
ORUFI08G15010 Oryza rufipogon ORUFI08G15010 I 0.000
ORUFI09G06720 Oryza rufipogon ORUFI09G06720 I 0.000
OS03G0335200 Oryza sativa OS03G0335200 I 0.000
OS05G0322900 Oryza sativa OS05G0322900 I 0.000
OS08G0386200 Oryza sativa OS08G0386200 I 0.000
OS09G0334500 Oryza sativa OS09G0334500 I 0.000
Pavir.Ba02545 Panicum virgatum Pavir.Ba02545 I 0.000
Pavir.Bb02088 Panicum virgatum Pavir.Bb02088 I 0.000
Pavir.Ca02012 Panicum virgatum Pavir.Ca02012 I 0.000
Pavir.Cb01173 Panicum virgatum Pavir.Cb01173 I 0.000
Pavir.Fa01520 Panicum virgatum Pavir.Fa01520 I 0.000
Pavir.Ga01476 Panicum virgatum Pavir.Ga01476 N 0.000
Pavir.Gb01556 Panicum virgatum Pavir.Gb01556 I 0.000
Pavir.Ib01568 Panicum virgatum Pavir.Ib01568 I 0.000
Pavir.J05812 Panicum virgatum Pavir.J05812 I 0.000
Pavir.J37854 Panicum virgatum Pavir.J37854 I 0.000
PDK_20s1314561g002 Phoenix dactylifera PDK_20s1314561g002 I 0.000
PGSC0003DMG400008391 Solanum tuberosum PGSC0003DMG400008391 I 0.000
PGSC0003DMG400020608 Solanum tuberosum PGSC0003DMG400020608 I 0.000
PGSC0003DMG400027582 Solanum tuberosum PGSC0003DMG400027582 I 0.000
PGSC0003DMG400029207 Solanum tuberosum PGSC0003DMG400029207 I 0.000
PK03324.1 Cannabis sativa PK03324.1 I 0.000
PK10616.1 Cannabis sativa PK10616.1 I 0.000
PK21378.1 Cannabis sativa PK21378.1 I 0.000
Pm003014 Prunus mume Pm003014 I 0.000
Pm003015 Prunus mume Pm003015 I 0.000
Pm019286 Prunus mume Pm019286 I 0.000
POPTR_0006s10950 Populus trichocarpa POPTR_0006s10950 I 0.000
POPTR_0013s09470 Populus trichocarpa POPTR_0013s09470 I 0.000
POPTR_0016s14490 Populus trichocarpa POPTR_0016s14490 I 0.000
PRUPE_ppa020736mg Prunus persica PRUPE_ppa020736mg I 0.000
PRUPE_ppa025912mg Prunus persica PRUPE_ppa025912mg I 0.000
PRUPE_ppa026125mg Prunus persica PRUPE_ppa026125mg I 0.000
PRUPE_ppa026704mg Prunus persica PRUPE_ppa026704mg I 0.000
SapurV1A.0065s0580 Salix purpurea SapurV1A.0065s0580 I 0.000
SapurV1A.0356s0010 Salix purpurea SapurV1A.0356s0010 I 0.000
SapurV1A.0914s0120 Salix purpurea SapurV1A.0914s0120 I 0.000
Sb02g022280 Sorghum bicolor Sb02g022280 I 0.000
Sb02g022290 Sorghum bicolor Sb02g022290 I 0.000
Sb07g019400 Sorghum bicolor Sb07g019400 I 0.000
Sb08g005080 Sorghum bicolor Sb08g005080 I 0.000
Si012735m.g Setaria italica Si012735m.g I 0.000
Si015433m.g Setaria italica Si015433m.g I 0.000
Si022702m.g Setaria italica Si022702m.g I 0.000
Si036565m.g Setaria italica Si036565m.g I 0.000
Solyc03g095770.2 Solanum lycopersicum Solyc03g095770.2 I 0.000
Solyc09g015770.2 Solanum lycopersicum Solyc09g015770.2 I 0.000
TCM_019689 Theobroma cacao TCM_019689 I 0.000
TCM_045556 Theobroma cacao TCM_045556 I 0.000
Thhalv10001568m.g Eutrema salsugineum Thhalv10001568m.g I 0.000
Thhalv10006146m.g Eutrema salsugineum Thhalv10006146m.g I 0.000
Traes_2AS_6269D889E Triticum aestivum Traes_2AS_6269D889E I 0.000
Traes_2BS_B65714572 Triticum aestivum Traes_2BS_B65714572 I 0.000
Traes_7DL_A9EF00572 Triticum aestivum Traes_7DL_A9EF00572 I 0.000
TRIUR3_04352 Triticum urartu TRIUR3_04352 I 0.000
TRIUR3_22128 Triticum urartu TRIUR3_22128 I 0.000
TRIUR3_26571 Triticum urartu TRIUR3_26571 N 0.000
VIT_08s0058g01390 Vitis vinifera VIT_08s0058g01390 I 0.000
VIT_13s0067g03140 Vitis vinifera VIT_13s0067g03140 I 0.000