CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CGGC5_8845
(
Colletotrichum gloeosporioides
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
CGGC5_8845
T326995_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ELA30933
Sox
136
205
PKRPLTPYFLYMQTARPIIASDLGEQAPKGAVQEEGQRRWKAMNPVEKAGWNNAYQYNLRLYQARVHAYK
Links
Other
Sox
family TFs
Other
Colletotrichum gloeosporioides
TFs
99 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29908.m006255
Ricinus communis
29908.m006255
N
0.000
AMTR_s00002p00019320
Amborella trichopoda
AMTR_s00002p00019320
I
0.000
AMTR_s00010p00144270
Amborella trichopoda
AMTR_s00010p00144270
I
0.000
BHLH32
Arabidopsis thaliana
AT3G25710
I
0.000
BGIOSGA026937
Oryza indica
BGIOSGA026937
I
0.000
BGIOSGA029777
Oryza indica
BGIOSGA029777
I
0.000
Bo2g138630
Brassica oleracea
Bo2g138630
I
0.000
Bo7g081980
Brassica oleracea
Bo7g081980
I
0.000
Bostr.0556s0241
Boechera stricta
Bostr.0556s0241
I
0.000
Bra025158
Brassica rapa
Bra025158
I
0.000
Bra026510
Brassica rapa
Bra026510
I
0.000
BRADI4G29990
Brachypodium distachyon
BRADI4G29990
N
0.000
Cagra.0417s0002
Capsella grandiflora
Cagra.0417s0002
I
0.000
Carubv10017470m.g
Capsella rubella
Carubv10017470m.g
I
0.000
cassava34286.m1
Manihot esculenta
cassava34286.m1
N
0.000
Ca_14981
Cicer arietinum
Ca_14981
N
0.000
Ciclev10002205m.g
Citrus clementina
Ciclev10002205m.g
N
0.000
Cla022500
Citrullus lanatus
Cla022500
N
0.000
Cucsa.160650
Cucumis sativus
Cucsa.160650
N
0.000
BHLH32
Arabidopsis lyrata
fgenesh2_kg.5__324__AT3G25710.1
I
0.000
GLYMA02G37720
Glycine max
GLYMA02G37720
N
0.000
GLYMA14G36010
Glycine max
GLYMA14G36010
N
0.000
Gorai.009G230000
Gossypium raimondii
Gorai.009G230000
N
0.000
GRMZM2G107276
Zea mays
GRMZM2G107276
I
0.000
GRMZM2G176141
Zea mays
GRMZM2G176141
N
0.000
GRMZM2G526668
Zea mays
GRMZM2G526668
I
0.000
LPERR08G12910
Leersia perrieri
LPERR08G12910
I
0.000
LPERR09G06880
Leersia perrieri
LPERR09G06880
I
0.000
Lus10034271.g
Linum usitatissimum
Lus10034271.g
I
0.000
Lus10041493.g
Linum usitatissimum
Lus10041493.g
I
0.000
MDP0000562627
Malus domestica
MDP0000562627
N
0.000
MLOC_12832
Hordeum vulgare
MLOC_12832
N
0.000
MTR_5g066080
Medicago truncatula
MTR_5g066080
N
0.000
OBART08G15650
Oryza barthii
OBART08G15650
I
0.000
OGLUM08G16400
Oryza glumaepatula
OGLUM08G16400
I
0.000
OMERI08G12930
Oryza meridionalis
OMERI08G12930
I
0.000
OMERI09G07780
Oryza meridionalis
OMERI09G07780
I
0.000
ONIVA08G16750
Oryza nivara
ONIVA08G16750
I
0.000
ONIVA09G09550
Oryza nivara
ONIVA09G09550
I
0.000
OPUNC08G13730
Oryza punctata
OPUNC08G13730
I
0.000
orange1.1g024930m.g
Citrus sinensis
orange1.1g024930m.g
N
0.000
ORGLA08G0137400
Oryza glaberrima
ORGLA08G0137400
I
0.000
ORUFI08G17560
Oryza rufipogon
ORUFI08G17560
I
0.000
ORUFI09G10670
Oryza rufipogon
ORUFI09G10670
I
0.000
OS08G0432800
Oryza sativa
OS08G0432800
I
0.000
OS09G0410700
Oryza sativa
OS09G0410700
I
0.000
PK01498.1
Cannabis sativa
PK01498.1
N
0.000
Sb02g024460
Sorghum bicolor
Sb02g024460
N
0.000
Sb07g021170
Sorghum bicolor
Sb07g021170
I
0.000
Si013911m.g
Setaria italica
Si013911m.g
I
0.000
Si030496m.g
Setaria italica
Si030496m.g
N
0.000
Thhalv10004524m.g
Eutrema salsugineum
Thhalv10004524m.g
I
0.000
Traes_5BL_CF90A7CAE
Triticum aestivum
Traes_5BL_CF90A7CAE
N
0.000
VIT_18s0001g07410
Vitis vinifera
VIT_18s0001g07410
N
0.000