CRE03995 (Caenorhabditis remanei)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 CRE03995 T327225_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
CRE03995 Sox 559 625

Links

Other Sox family TFs
Other Caenorhabditis remanei TFs

229 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL011425 Aedes aegypti AAEL011425 I 0.467
AALB010796 Anopheles albimanus AALB010796 N 0.424
ACAC_0000817201 Angiostrongylus cantonensis ACAC_0000817201 N 0.491
ACAC_0000857301 Angiostrongylus cantonensis ACAC_0000857301 N 0.442
ACOC_0000235301 Angiostrongylus costaricensis ACOC_0000235301 N 0.491
ACOC_0000653601 Angiostrongylus costaricensis ACOC_0000653601 N 0.442
ACYPI006576 Acyrthosiphon pisum ACYPI006576 I 0.438
ADAC005115 Anopheles darlingi ADAC005115 N 0.424
ALUE_0000365901 Ascaris lumbricoides ALUE_0000365901 N 0.472
AMAG_00757 Allomyces macrogynus AMAG_00757 N 0.428
AMAG_02260 Allomyces macrogynus AMAG_02260 N 0.428
ANCCAN_04253 Ancylostoma caninum ANCCAN_04253 N 0.466
ANCCAN_08230 Ancylostoma caninum ANCCAN_08230 I 0.489
ANCCAN_12424 Ancylostoma caninum ANCCAN_12424 I 0.518
ANCCAN_17708 Ancylostoma caninum ANCCAN_17708 I 0.518
ANCCAN_21637 Ancylostoma caninum ANCCAN_21637 N 0.442
ANCCAN_21638 Ancylostoma caninum ANCCAN_21638 I 0.518
ANCCEY_04224 Ancylostoma ceylanicum ANCCEY_04224 N 0.491
ANCCEY_10464 Ancylostoma ceylanicum ANCCEY_10464 N 0.442
ANCDUO_10137 Ancylostoma duodenale ANCDUO_10137 N 0.608
ANCDUO_11855 Ancylostoma duodenale ANCDUO_11855 N 0.442
ANCDUO_11856 Ancylostoma duodenale ANCDUO_11856 I 0.518
ANCDUO_12352 Ancylostoma duodenale ANCDUO_12352 N 0.491
ANCDUO_24920 Ancylostoma duodenale ANCDUO_24920 I 0.518
ANCDUO_26276 Ancylostoma duodenale ANCDUO_26276 N 0.474
ASIM_0001178701 Anisakis simplex ASIM_0001178701 N 0.479
ASU_05994 Ascaris suum ASU_05994 N 0.479
ASU_09087 Ascaris suum ASU_09087 N 0.472
BGIBMGA005288 Bombyx mori BGIBMGA005288 N 0.492
BGIBMGA005289 Bombyx mori BGIBMGA005289 I 0.435
Bm2524 Brugia malayi Bm2524 N 0.427
Bm6643 Brugia malayi Bm6643 N 0.431
Bm8632 Brugia malayi Bm8632 N 0.452
BXY_1081800 Bursaphelenchus xylophilus BXY_1081800 I 0.510
BXY_1081900 Bursaphelenchus xylophilus BXY_1081900 I 0.508
CapteG172235 Capitella teleta CapteG172235 I 0.419
CBG04066 Caenorhabditis briggsae CBG04066 N 0.700
CBG09136 Caenorhabditis briggsae CBG09136 N 0.578
CBN25379 Caenorhabditis brenneri CBN25379 I 0.632
Cflo_11824--XP_001120264.1_APIME Camponotus floridanus Cflo_11824--XP_001120264.1_APIME N 0.477
CJA04355 Caenorhabditis japonica CJA04355 N 0.481
CJA19030 Caenorhabditis japonica CJA19030 N 0.554
CLEC003860 Cimex lectularius CLEC003860 I 0.437
CPIJ002953 Culex quinquefasciatus CPIJ002953 N 0.499
CPIJ020011 Culex quinquefasciatus CPIJ020011 I 0.529
CpipJ_CPIJ002953 Culex pipiens CpipJ_CPIJ002953 N 0.499
CpipJ_CPIJ020011 Culex pipiens CpipJ_CPIJ020011 I 0.529
CRE11852 Caenorhabditis remanei CRE11852 N 0.481
csin108029 Clonorchis sinensis csin108029 N 0.466
DICVIV_01337 Dictyocaulus viviparus DICVIV_01337 N 0.442
DICVIV_05502 Dictyocaulus viviparus DICVIV_05502 N 0.491
DME_0000779601 Dracunculus medinensis DME_0000779601 N 0.474
ECANG7_00770 Echinococcus canadensis ECANG7_00770 N 0.491
ECPE_0001309901 Echinostoma caproni ECPE_0001309901 N 0.453
EDI_049480 Entamoeba dispar EDI_049480 N 0.426
EEL_0000829801 Elaeophora elaphi EEL_0000829801 N 0.427
EHI_045480 Entamoeba histolytica EHI_045480 N 0.416
EmuJ_000894800 Echinococcus multilocularis EmuJ_000894800 N 0.491
EVEC_0000079801 Enterobius vermicularis EVEC_0000079801 N 0.483
EVEC_0000171701 Enterobius vermicularis EVEC_0000171701 N 0.426
EVEC_0000195001 Enterobius vermicularis EVEC_0000195001 N 0.471
HmgD Drosophila melanogaster FBgn0004362 N 0.447
HmgZ Drosophila melanogaster FBgn0010228 I 0.457
Ssrp Drosophila melanogaster FBgn0010278 N 0.490
HmgZ Drosophila yakuba FBgn0068145 I 0.457
HmgD Drosophila yakuba FBgn0068146 N 0.447
GA14726 Drosophila pseudoobscura FBgn0074753 I 0.452
Ssrp Drosophila pseudoobscura FBgn0078456 N 0.436
GF11622 Drosophila ananassae FBgn0088662 I 0.457
GF12460 Drosophila ananassae FBgn0089497 N 0.490
GF13265 Drosophila ananassae FBgn0090297 N 0.447
GG19998 Drosophila erecta FBgn0112197 N 0.495
GG20749 Drosophila erecta FBgn0112936 I 0.457
GG22136 Drosophila erecta FBgn0114310 N 0.447
GH20784 Drosophila grimshawi FBgn0128247 I 0.452
GH21124 Drosophila grimshawi FBgn0128586 N 0.447
GH21151 Drosophila grimshawi FBgn0128613 N 0.481
GI18728 Drosophila mojavensis FBgn0141467 N 0.447
GI18750 Drosophila mojavensis FBgn0141489 N 0.479
GI20867 Drosophila mojavensis FBgn0143601 I 0.452
GL11071 Drosophila persimilis FBgn0148681 N 0.436
GL16947 Drosophila persimilis FBgn0154551 N 0.447
GL17523 Drosophila persimilis FBgn0155126 I 0.452
GM13209 Drosophila sechellia FBgn0168140 N 0.447
GM15692 Drosophila sechellia FBgn0170608 I 0.457
GM15859 Drosophila sechellia FBgn0170775 N 0.447
GD11622 Drosophila simulans FBgn0183362 N 0.447
GD25013 Drosophila simulans FBgn0196325 N 0.490
GD25171 Drosophila simulans FBgn0196483 I 0.457
GJ20604 Drosophila virilis FBgn0207743 I 0.452
GJ21748 Drosophila virilis FBgn0208866 N 0.447
GJ21774 Drosophila virilis FBgn0208892 N 0.495
GK15658 Drosophila willistoni FBgn0217663 I 0.457
GK15924 Drosophila willistoni FBgn0217926 N 0.447
GK22092 Drosophila willistoni FBgn0224077 N 0.522
GE11532 Drosophila yakuba FBgn0229332 N 0.495
GA30453 Drosophila pseudoobscura FBgn0264590 N 0.447
GB54571 Apis mellifera GB54571 N 0.443
GPUH_0001272801 Gongylonema pulchrum GPUH_0001272801 N 0.439
GPUH_0001539601 Gongylonema pulchrum GPUH_0001539601 N 0.439
gw1.6.1665.1 Ostreococcus RCC809 gw1.6.1665.1 I 0.477
Hba_18326 Heterorhabditis bacteriophora Hba_18326 I 0.466
HCOI00417600 Haemonchus contortus HCOI00417600 N 0.442
HCOI01420700 Haemonchus contortus HCOI01420700 N 0.539
HCOI01550200 Haemonchus contortus HCOI01550200 N 0.491
HCOI02106600 Haemonchus contortus HCOI02106600 N 0.539
HDID_0000239001 Hymenolepis diminuta HDID_0000239001 N 0.464
HMEL015307 Heliconius melpomene HMEL015307 N 0.484
HmN_000028000 Hymenolepis microstoma HmN_000028000 N 0.468
HPBE_0002310801 Heligmosomoides bakeri HPBE_0002310801 N 0.442
HPBE_0002408301 Heligmosomoides bakeri HPBE_0002408301 I 0.578
HPLM_0000803901 Haemonchus placei HPLM_0000803901 N 0.442
HPLM_0001324601 Haemonchus placei HPLM_0001324601 N 0.491
Hsal_00538--XP_001120264.1_APIME Harpegnathos saltator Hsal_00538--XP_001120264.1_APIME N 0.469
KGM_13851 Danaus plexippus KGM_13851 N 0.464
KGM_13852 Danaus plexippus KGM_13852 I 0.426
L596_g16476 Steinernema carpocapsae L596_g16476 N 0.488
L596_g20063 Steinernema carpocapsae L596_g20063 N 0.441
L596_g28088 Steinernema carpocapsae L596_g28088 N 0.474
L798_13679 Zootermopsis nevadensis L798_13679 N 0.440
L889_g16198 Steinernema feltiae L889_g16198 N 0.490
L889_g29516 Steinernema feltiae L889_g29516 N 0.457
L889_g6592 Steinernema feltiae L889_g6592 N 0.415
L889_g9094 Steinernema feltiae L889_g9094 N 0.472
L892_g15959 Steinernema scapterisci L892_g15959 N 0.470
L892_g19058 Steinernema scapterisci L892_g19058 N 0.474
L892_g23618 Steinernema scapterisci L892_g23618 N 0.490
L892_g26355 Steinernema scapterisci L892_g26355 N 0.470
L893_g23503 Steinernema glaseri L893_g23503 N 0.490
L893_g29974 Steinernema glaseri L893_g29974 N 0.474
L893_g3116 Steinernema glaseri L893_g3116 N 0.466
L898_g4830 Steinernema monticolum L898_g4830 N 0.474
L898_g7743 Steinernema monticolum L898_g7743 N 0.490
LCUP005047 Lucilia cuprina LCUP005047 N 0.481
LDEC020995 Leptinotarsa decemlineata LDEC020995 N 0.502
LOAG_04347 Loa loa LOAG_04347 N 0.427
LOAG_08062 Loa loa LOAG_08062 N 0.452
maker-nMf.1.1.scaf04887-augustus-gene-0.6 Meloidogyne floridensis maker-nMf.1.1.scaf04887-augustus-gene-0.6 N 0.509
MCINX001064 Melitaea cinxia MCINX001064 I 0.430
MDOA007633 Musca domestica MDOA007633 N 0.522
MDOA009531 Musca domestica MDOA009531 N 0.429
MDOA014797 Musca domestica MDOA014797 I 0.446
MhA1_Contig128.frz3.gene5 Meloidogyne hapla MhA1_Contig128.frz3.gene5 N 0.469
MhA1_Contig2971.frz3.fgene1 Meloidogyne hapla MhA1_Contig2971.frz3.fgene1 N 0.469
MhA1_Contig400.frz3.gene18 Meloidogyne hapla MhA1_Contig400.frz3.gene18 N 0.509
Minc01744 Meloidogyne incognita Minc01744 N 0.476
Minc03634 Meloidogyne incognita Minc03634 N 0.509
Minc04648 Meloidogyne incognita Minc04648 N 0.509
Minc10016 Meloidogyne incognita Minc10016 N 0.476
ML09221a Mnemiopsis leidyi ML09221a N 0.446
nAv.1.0.1.g03971 Acanthocheilonema viteae nAv.1.0.1.g03971 N 0.427
nAv.1.0.1.g08227 Acanthocheilonema viteae nAv.1.0.1.g08227 N 0.452
NBR_0000004401 Nippostrongylus brasiliensis NBR_0000004401 N 0.570
NBR_0001132501 Nippostrongylus brasiliensis NBR_0001132501 N 0.442
NBR_0001277401 Nippostrongylus brasiliensis NBR_0001277401 N 0.491
nDi.2.2.2.g04713 Dirofilaria immitis nDi.2.2.2.g04713 N 0.441
nDi.2.2.2.g07477 Dirofilaria immitis nDi.2.2.2.g07477 N 0.427
nDi.2.2.2.g08508 Dirofilaria immitis nDi.2.2.2.g08508 N 0.452
NECAME_10840 Necator americanus NECAME_10840 N 0.442
NECAME_16525 Necator americanus NECAME_16525 N 0.608
NECAME_17555 Necator americanus NECAME_17555 N 0.491
NECAME_17981 Necator americanus NECAME_17981 N 0.491
NEMVEDRAFT_v1g59568 Nematostella vectensis NEMVEDRAFT_v1g59568 N 0.415
nLs.2.1.2.g02941 Litomosoides sigmodontis nLs.2.1.2.g02941 N 0.441
nLs.2.1.2.g04082 Litomosoides sigmodontis nLs.2.1.2.g04082 N 0.452
nLs.2.1.2.g07238 Litomosoides sigmodontis nLs.2.1.2.g07238 N 0.427
nOo.2.0.1.g02324 Onchocerca ochengi nOo.2.0.1.g02324 N 0.439
nOo.2.0.1.g04693 Onchocerca ochengi nOo.2.0.1.g04693 N 0.452
OESDEN_09619 Oesophagostomum dentatum OESDEN_09619 N 0.491
OFLC_0000770701 Onchocerca flexuosa OFLC_0000770701 N 0.427
PMAA_054260 Talaromyces marneffei PMAA_054260 N 0.415
PMAA_054260 Penicillium marneffei PMAA_054260 N 0.415
PPA02261 Pristionchus pacificus PPA02261 N 0.483
PPA06513 Pristionchus pacificus PPA06513 N 0.518
PPA14042 Pristionchus pacificus PPA14042 N 0.437
Ppa-hmg-1.1 Pristionchus pacificus PPA22767 N 0.460
PPAI002521 Phlebotomus papatasi PPAI002521 N 0.496
PPAI002522 Phlebotomus papatasi PPAI002522 I 0.459
PTRK_0000111400 Parastrongyloides trichosuri PTRK_0000111400 N 0.481
PTRK_0001161700 Parastrongyloides trichosuri PTRK_0001161700 N 0.481
PTRK_0001490800 Parastrongyloides trichosuri PTRK_0001490800 N 0.472
RPRC006380 Rhodnius prolixus RPRC006380 I 0.478
RSKR_0000128800 Rhabditophanes kr3021 RSKR_0000128800 N 0.472
RSKR_0000171200 Rhabditophanes kr3021 RSKR_0000171200 N 0.425
RSKR_0000269200 Rhabditophanes kr3021 RSKR_0000269200 N 0.434
RSKR_0000540800 Rhabditophanes kr3021 RSKR_0000540800 N 0.425
RSKR_0000587700 Rhabditophanes kr3021 RSKR_0000587700 N 0.423
RSKR_0000733200 Rhabditophanes kr3021 RSKR_0000733200 N 0.449
RSKR_0000746900 Rhabditophanes kr3021 RSKR_0000746900 N 0.478
Sakowv30021656m.g Saccoglossus kowalevskii Sakowv30021656m.g N 0.467
SAPIO_CDS3132 Scedosporium apiospermum SAPIO_CDS3132 N 0.426
scaffold113-EXSNAP2012.49 Pristionchus exspectatus scaffold113-EXSNAP2012.49 N 0.460
scaffold1425-EXSNAP2012.3 Pristionchus exspectatus scaffold1425-EXSNAP2012.3 N 0.460
scaffold164-EXSNAP2012.19 Pristionchus exspectatus scaffold164-EXSNAP2012.19 N 0.483
scaffold98-EXSNAP2012.51 Pristionchus exspectatus scaffold98-EXSNAP2012.51 N 0.518
SMUV_0000499601 Syphacia muris SMUV_0000499601 N 0.499
SMUV_0000856901 Syphacia muris SMUV_0000856901 N 0.459
SPAL_0000986100 Strongyloides papillosus SPAL_0000986100 N 0.472
SPAL_0001085700 Strongyloides papillosus SPAL_0001085700 N 0.481
SPAL_0001421900 Strongyloides papillosus SPAL_0001421900 N 0.487
SSLN_0000125101 Schistocephalus solidus SSLN_0000125101 N 0.457
SSTP_0000585600 Strongyloides stercoralis SSTP_0000585600 N 0.481
SSTP_0000790100 Strongyloides stercoralis SSTP_0000790100 N 0.493
SSTP_0001024100 Strongyloides stercoralis SSTP_0001024100 N 0.472
SVE_0294800 Strongyloides venezuelensis SVE_0294800 N 0.472
SVE_0536900 Strongyloides venezuelensis SVE_0536900 N 0.487
SVE_0954900 Strongyloides venezuelensis SVE_0954900 N 0.481
SVUK_0001398701 Strongylus vulgaris SVUK_0001398701 N 0.442
SVUK_0001721701 Strongylus vulgaris SVUK_0001721701 N 0.418
SVUK_0001798101 Strongylus vulgaris SVUK_0001798101 N 0.600
T265_15460 Opisthorchis viverrini T265_15460 N 0.466
TASK_0000475801 Taenia asiatica TASK_0000475801 N 0.561
TC012866 Tribolium castaneum TC012866 N 0.420
TCLT_0000097001 Thelazia callipaeda TCLT_0000097001 N 0.427
TCNE_0000332201 Toxocara canis TCNE_0000332201 N 0.472
TCNE_0001025901 Toxocara canis TCNE_0001025901 N 0.479
TELCIR_02603 Teladorsagia circumcincta TELCIR_02603 N 0.491
TELCIR_05217 Teladorsagia circumcincta TELCIR_05217 N 0.442
TELCIR_22690 Teladorsagia circumcincta TELCIR_22690 N 0.442
TriadG64155 Trichoplax adhaerens TriadG64155 I 0.482
TsM_000111500 Taenia solium TsM_000111500 N 0.533
TTAC_0000692101 Hydatigera taeniaeformis TTAC_0000692101 N 0.548
hmg-1.1 Caenorhabditis elegans WBGene00001971 N 0.479
hmg-3 Caenorhabditis elegans WBGene00001973 N 0.561
hmg-4 Caenorhabditis elegans WBGene00001974 N 0.559
WBGene00238628 Onchocerca volvulus WBGene00238628 N 0.452
WBGene00244511 Onchocerca volvulus WBGene00244511 N 0.439
WUBG_03677 Wuchereria bancrofti WUBG_03677 N 0.427
YQE_02071 Dendroctonus ponderosae YQE_02071 N 0.447