DAPPUDRAFT_232871 (Daphnia pulex)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 DAPPUDRAFT_232871 T327318_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EFX89813 Sox 11 81
EFX89813 Sox 102 170

Links

Other Sox family TFs
Other Daphnia pulex TFs

246 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAC59859 Xenopus laevis AAC59859 N 0.455
AAEL011380 Aedes aegypti AAEL011380 N 0.600
AAH44009 Xenopus laevis AAH44009 N 0.432
AAH73449 Xenopus laevis AAH73449 N 0.455
AAI68534 Xenopus tropicalis AAI68534 N 0.463
AALB006743 Anopheles albimanus AALB006743 N 0.600
AARA010318 Anopheles arabiensis AARA010318 N 0.600
AATE010886 Anopheles atroparvus AATE010886 N 0.490
AATE018776 Anopheles atroparvus AATE018776 N 0.600
ACAC_0001052301 Angiostrongylus cantonensis ACAC_0001052301 N 0.418
ACEP16613 Atta cephalotes ACEP16613 N 0.608
ACOC_0000768601 Angiostrongylus costaricensis ACOC_0000768601 N 0.471
ACUA021022 Anopheles culicifacies ACUA021022 N 0.600
ACYPI007949 Acyrthosiphon pisum ACYPI007949 N 0.612
ADAC001494 Anopheles darlingi ADAC001494 N 0.600
ADIR000367 Anopheles dirus ADIR000367 N 0.454
ADIR011701 Anopheles dirus ADIR011701 N 0.600
AEPI002924 Anopheles epiroticus AEPI002924 N 0.600
AFAF003948 Anopheles farauti AFAF003948 N 0.600
AFUN010134 Anopheles funestus AFUN010134 N 0.600
AGAP000005 Anopheles gambiae AGAP000005 N 0.600
AMAM015540 Anopheles maculatus AMAM015540 N 0.600
AMEC021909 Anopheles melas AMEC021909 N 0.600
AMEM017336 Anopheles merus AMEM017336 N 0.600
AMIN005344 Anopheles minimus AMIN005344 N 0.600
ANCCAN_10156 Ancylostoma caninum ANCCAN_10156 N 0.437
Aqu1.227714 Amphimedon queenslandica Aqu1.227714 N 0.421
AQUA004962 Anopheles quadriannulatus AQUA004962 N 0.566
ASIM_0000048401 Anisakis simplex ASIM_0000048401 N 0.420
ASIS000124 Anopheles sinensis ASIS000124 N 0.600
ASIS009950 Anopheles sinensis ASIS009950 N 0.497
ASU_03902 Ascaris suum ASU_03902 N 0.452
augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2 N 0.424
A_00070 Schistosoma haematobium A_00070 N 0.474
A_05510 Schistosoma haematobium A_05510 N 0.486
BAA06440 Xenopus laevis BAA06440 N 0.431
BGIBMGA001132 Bombyx mori BGIBMGA001132 N 0.579
Bm4180 Brugia malayi Bm4180 N 0.452
CapteG158220 Capitella teleta CapteG158220 N 0.504
CBG17468 Caenorhabditis briggsae CBG17468 N 0.439
CBN17977 Caenorhabditis brenneri CBN17977 N 0.441
Cflo_05895--XP_001121384.1_APIME Camponotus floridanus Cflo_05895--XP_001121384.1_APIME N 0.608
CGI_10023724 Crassostrea gigas CGI_10023724 N 0.470
CJA09678 Caenorhabditis japonica CJA09678 N 0.441
CPIJ014043 Culex quinquefasciatus CPIJ014043 N 0.583
CpipJ_CPIJ014043 Culex pipiens CpipJ_CPIJ014043 N 0.583
CRE02943 Caenorhabditis remanei CRE02943 N 0.426
csin110255 Clonorchis sinensis csin110255 N 0.472
csin112095 Clonorchis sinensis csin112095 N 0.473
D915_00818 Fasciola hepatica D915_00818 N 0.453
D915_15256 Fasciola hepatica D915_15256 N 0.469
D917_01254 Trichinella nativa D917_01254 N 0.482
D917_08189 Trichinella nativa D917_08189 N 0.447
D918_07195 Trichuris suis D918_07195 N 0.463
DAPPUDRAFT_306496 Daphnia pulex DAPPUDRAFT_306496 N 0.638
DILT_0001006701 Diphyllobothrium latum DILT_0001006701 N 0.416
DILT_0001497901 Diphyllobothrium latum DILT_0001497901 N 0.498
DME_0001055201 Dracunculus medinensis DME_0001055201 N 0.437
ECANG7_02036 Echinococcus canadensis ECANG7_02036 N 0.468
EEL_0000068601 Elaeophora elaphi EEL_0000068601 N 0.452
EFV57410 Trichinella spiralis EFV57410 N 0.482
EmuJ_001049000 Echinococcus multilocularis EmuJ_001049000 N 0.497
ENSAMXG00000014031 Astyanax mexicanus ENSAMXG00000014031 N 0.435
ENSAMXG00000014832 Astyanax mexicanus ENSAMXG00000014832 N 0.461
HMGB1 Bos taurus ENSBTAG00000014862 N 0.424
ENSBTAG00000031711 Bos taurus ENSBTAG00000031711 N 0.443
hmg1/2 Ciona intestinalis ENSCING00000004075 N 0.533
ENSCJAG00000004401 Callithrix jacchus ENSCJAG00000004401 N 0.448
ENSCJAG00000007419 Callithrix jacchus ENSCJAG00000007419 N 0.418
ENSCJAG00000008378 Callithrix jacchus ENSCJAG00000008378 N 0.437
ENSCJAG00000008384 Callithrix jacchus ENSCJAG00000008384 N 0.434
ENSCJAG00000014214 Callithrix jacchus ENSCJAG00000014214 N 0.452
ENSCJAG00000022832 Callithrix jacchus ENSCJAG00000022832 N 0.468
ENSCJAG00000033322 Callithrix jacchus ENSCJAG00000033322 N 0.447
ENSCPOG00000003985 Cavia porcellus ENSCPOG00000003985 N 0.437
ENSCSAG00000013078 Chlorocebus sabaeus ENSCSAG00000013078 N 0.447
ENSCSAVG00000000341 Ciona savignyi ENSCSAVG00000000341 N 0.536
hmgb2a Danio rerio ENSDARG00000029722 N 0.463
hmgb1a Danio rerio ENSDARG00000099175 N 0.442
ENSDNOG00000005537 Dasypus novemcinctus ENSDNOG00000005537 N 0.468
ENSECAG00000003655 Equus caballus ENSECAG00000003655 N 0.418
ENSECAG00000005186 Equus caballus ENSECAG00000005186 N 0.437
ENSFCAG00000028961 Felis catus ENSFCAG00000028961 N 0.457
hmgb2b Gasterosteus aculeatus ENSGACG00000001173 N 0.441
hmgb1b Gasterosteus aculeatus ENSGACG00000011447 N 0.487
ENSGMOG00000010060 Gadus morhua ENSGMOG00000010060 N 0.427
ENSGMOG00000010657 Gadus morhua ENSGMOG00000010657 N 0.433
HMGB1 Microcebus murinus ENSMICG00000006213 N 0.437
ENSMICG00000016224 Microcebus murinus ENSMICG00000016224 N 0.446
ENSMMUG00000001275 Macaca mulatta ENSMMUG00000001275 N 0.437
HMGB2 Macaca mulatta ENSMMUG00000020008 N 0.449
ENSMODG00000009238 Monodelphis domestica ENSMODG00000009238 N 0.437
ENSMPUG00000018359 Mustela putorius furo ENSMPUG00000018359 N 0.447
ENSOARG00000010383 Ovis aries ENSOARG00000010383 N 0.463
ENSOARG00000011611 Ovis aries ENSOARG00000011611 N 0.457
ENSOARG00000015382 Ovis aries ENSOARG00000015382 N 0.463
ENSOARG00000015955 Ovis aries ENSOARG00000015955 N 0.463
ENSOARG00000017078 Ovis aries ENSOARG00000017078 N 0.437
ENSOCUG00000004133 Oryctolagus cuniculus ENSOCUG00000004133 N 0.466
ENSOCUG00000021132 Oryctolagus cuniculus ENSOCUG00000021132 N 0.449
ENSOCUG00000023449 Oryctolagus cuniculus ENSOCUG00000023449 N 0.418
HMGB3 Oryctolagus cuniculus ENSOCUG00000024959 N 0.447
ENSOCUG00000027747 Oryctolagus cuniculus ENSOCUG00000027747 N 0.418
ENSOGAG00000028411 Otolemur garnettii ENSOGAG00000028411 N 0.437
ENSOGAG00000032147 Otolemur garnettii ENSOGAG00000032147 N 0.427
ENSONIG00000005505 Oreochromis niloticus ENSONIG00000005505 N 0.420
ENSONIG00000019935 Oreochromis niloticus ENSONIG00000019935 N 0.431
hmgb1a Oryzias latipes ENSORLG00000003400 N 0.454
hmgb2b Oryzias latipes ENSORLG00000018687 N 0.431
ENSPANG00000005029 Papio anubis ENSPANG00000005029 N 0.437
ENSPANG00000007527 Papio anubis ENSPANG00000007527 N 0.463
ENSPANG00000010595 Papio anubis ENSPANG00000010595 N 0.432
ENSPANG00000011105 Papio anubis ENSPANG00000011105 N 0.437
ENSPFOG00000004533 Poecilia formosa ENSPFOG00000004533 N 0.426
ENSPFOG00000004794 Poecilia formosa ENSPFOG00000004794 N 0.447
ENSPFOG00000008464 Poecilia formosa ENSPFOG00000008464 N 0.490
ENSPMAG00000007397 Petromyzon marinus ENSPMAG00000007397 N 0.415
ENSPPYG00000011668 Pongo abelii ENSPPYG00000011668 N 0.432
Hmgb2l1 Rattus norvegicus ENSRNOG00000013167 N 0.457
RGD1561694 Rattus norvegicus ENSRNOG00000029107 N 0.457
AABR07025074.1 Rattus norvegicus ENSRNOG00000032550 N 0.429
Hmgb2 Rattus norvegicus ENSRNOG00000033321 N 0.457
Hmg1l1 Rattus norvegicus ENSRNOG00000034130 N 0.437
LOC688583 Rattus norvegicus ENSRNOG00000050910 N 0.450
Hmg1l1 Rattus norvegicus ENSRNOG00000051482 N 0.437
AC135696.1 Rattus norvegicus ENSRNOG00000058908 N 0.437
HMGB2 Sus scrofa ENSSSCG00000009704 N 0.446
ENSSSCG00000020770 Sus scrofa ENSSSCG00000020770 N 0.447
ENSSSCG00000024283 Sus scrofa ENSSSCG00000024283 N 0.447
ENSSTOG00000000443 Ictidomys tridecemlineatus ENSSTOG00000000443 N 0.437
ENSSTOG00000012404 Ictidomys tridecemlineatus ENSSTOG00000012404 N 0.446
ENSTBEG00000009427 Tupaia belangeri ENSTBEG00000009427 N 0.427
ENSTBEG00000016187 Tupaia belangeri ENSTBEG00000016187 N 0.420
hmgb2b Tetraodon nigroviridis ENSTNIG00000004824 N 0.444
hmgb1a Tetraodon nigroviridis ENSTNIG00000009909 N 0.443
hmgb1b Takifugu rubripes ENSTRUG00000004822 N 0.423
hmgb2b Takifugu rubripes ENSTRUG00000005015 N 0.444
hmgb1a Takifugu rubripes ENSTRUG00000008452 N 0.484
ENSXMAG00000006844 Xiphophorus maculatus ENSXMAG00000006844 N 0.426
ENSXMAG00000011106 Xiphophorus maculatus ENSXMAG00000011106 N 0.447
EVEC_0000577301 Enterobius vermicularis EVEC_0000577301 N 0.452
Dsp1 Drosophila melanogaster FBgn0011764 N 0.589
GA11488 Drosophila pseudoobscura FBgn0071539 N 0.589
GF19115 Drosophila ananassae FBgn0096126 N 0.589
GG17955 Drosophila erecta FBgn0110175 N 0.589
GH12282 Drosophila grimshawi FBgn0119761 N 0.589
GI10980 Drosophila mojavensis FBgn0133743 N 0.589
GD17278 Drosophila simulans FBgn0188840 N 0.589
GJ19445 Drosophila virilis FBgn0206588 N 0.589
GK25058 Drosophila willistoni FBgn0227017 N 0.589
GE17263 Drosophila yakuba FBgn0234741 N 0.589
fgenesh2_pm.scaffold_24000033 Branchiostoma floridae fgenesh2_pm.scaffold_24000033 N 0.461
GB47828 Apis mellifera GB47828 N 0.479
genemark-nMf.1.1.scaf06964-processed-gene-0.3 Meloidogyne floridensis genemark-nMf.1.1.scaf06964-processed-gene-0.3 N 0.424
Hba_13817 Heterorhabditis bacteriophora Hba_13817 N 0.468
HCOI00860100 Haemonchus contortus HCOI00860100 N 0.471
HDID_0000237901 Hymenolepis diminuta HDID_0000237901 N 0.479
HDID_0000408601 Hymenolepis diminuta HDID_0000408601 N 0.415
HelroG157726 Helobdella robusta HelroG157726 N 0.417
HelroG157878 Helobdella robusta HelroG157878 N 0.534
HelroG87827 Helobdella robusta HelroG87827 N 0.496
HMEL007340 Heliconius melpomene HMEL007340 N 0.609
HmN_000466000 Hymenolepis microstoma HmN_000466000 N 0.479
HNAJ_0001249801 Hymenolepis nana HNAJ_0001249801 N 0.479
Hsal_13110--XP_001121384.1_APIME Harpegnathos saltator Hsal_13110--XP_001121384.1_APIME N 0.608
ISCW017350 Ixodes scapularis ISCW017350 N 0.577
L596_g22130 Steinernema carpocapsae L596_g22130 N 0.448
L889_g13533 Steinernema feltiae L889_g13533 N 0.452
L892_g17551 Steinernema scapterisci L892_g17551 N 0.452
L893_g5947 Steinernema glaseri L893_g5947 N 0.452
LCUP007363 Lucilia cuprina LCUP007363 N 0.586
LDEC006842 Leptinotarsa decemlineata LDEC006842 N 0.593
LOAG_04936 Loa loa LOAG_04936 N 0.452
LotgiG200052 Lottia gigantea LotgiG200052 N 0.455
MCINX009638 Melitaea cinxia MCINX009638 N 0.493
MCOS_0000526101 Mesocestoides corti MCOS_0000526101 N 0.500
MDOA008812 Musca domestica MDOA008812 N 0.572
Myotis_brandtii_Hmgb1_10003213 Myotis brandtii Myotis_brandtii_Hmgb1_10003213 N 0.422
Myotis_brandtii_Hmgb1_10026956 Myotis brandtii Myotis_brandtii_Hmgb1_10026956 N 0.415
Myotis_brandtii_Hmgb2_10018437 Myotis brandtii Myotis_brandtii_Hmgb2_10018437 N 0.468
Myotis_brandtii_HMGB3_10026974 Myotis brandtii Myotis_brandtii_HMGB3_10026974 N 0.431
nAv.1.0.1.g02101 Acanthocheilonema viteae nAv.1.0.1.g02101 N 0.452
NBR_0000911001 Nippostrongylus brasiliensis NBR_0000911001 N 0.471
nDi.2.2.2.g04979 Dirofilaria immitis nDi.2.2.2.g04979 N 0.452
NECAME_09126 Necator americanus NECAME_09126 N 0.471
nRc.2.0.1.g43473 Romanomermis culicivorax nRc.2.0.1.g43473 N 0.461
NV15664 Nasonia vitripennis NV15664 N 0.621
PEQ_0000150901 Parascaris equorum PEQ_0000150901 N 0.452
PHUM006290 Pediculus humanus PHUM006290 N 0.579
Ppa-hmg-1.2 Pristionchus pacificus PPA02361 N 0.434
PTRK_0000986200 Parastrongyloides trichosuri PTRK_0000986200 N 0.439
PXEA_0000566701 Protopolystoma xenopodis PXEA_0000566701 N 0.490
PXEA_0000637001 Protopolystoma xenopodis PXEA_0000637001 N 0.496
PXEA_0002175501 Protopolystoma xenopodis PXEA_0002175501 N 0.515
RPRC006379 Rhodnius prolixus RPRC006379 N 0.491
Sakowv30042012m.g Saccoglossus kowalevskii Sakowv30042012m.g N 0.511
SBAD_0000405201 Soboliphyme baturini SBAD_0000405201 N 0.460
scaffold580-EXSNAP2012.5 Pristionchus exspectatus scaffold580-EXSNAP2012.5 N 0.434
SCUD_0000020101 Schistosoma curassoni SCUD_0000020101 N 0.480
SCUD_0000067701 Schistosoma curassoni SCUD_0000067701 N 0.486
SCUD_0001034301 Schistosoma curassoni SCUD_0001034301 N 0.474
SINV22586 Solenopsis invicta SINV22586 N 0.608
Sjc_0031360 Schistosoma japonicum Sjc_0031360 N 0.466
Sjc_0051340 Schistosoma japonicum Sjc_0051340 N 0.478
SMAR013695 Strigamia maritima SMAR013695 N 0.584
Smp_000980 Schistosoma mansoni Smp_000980 N 0.480
Smp_100090 Schistosoma mansoni Smp_100090 N 0.480
Smp_103530 Schistosoma mansoni Smp_103530 N 0.486
SMRZ_0000146101 Schistosoma margrebowiei SMRZ_0000146101 N 0.486
SMRZ_0000842001 Schistosoma margrebowiei SMRZ_0000842001 N 0.474
SMRZ_0001808901 Schistosoma margrebowiei SMRZ_0001808901 N 0.486
SMTD_0001017101 Schistosoma mattheei SMTD_0001017101 N 0.474
SMTD_0001194601 Schistosoma mattheei SMTD_0001194601 N 0.480
SMU15002907 Schmidtea mediterranea SMU15002907 N 0.449
SMU15016767 Schmidtea mediterranea SMU15016767 N 0.470
SMU15027649 Schmidtea mediterranea SMU15027649 N 0.438
SMU15030256 Schmidtea mediterranea SMU15030256 N 0.498
SMUV_0000232601 Syphacia muris SMUV_0000232601 N 0.452
SPAL_0001030300 Strongyloides papillosus SPAL_0001030300 N 0.439
SPU_005572 Strongylocentrotus purpuratus SPU_005572 N 0.483
SROB_0000153901 Schistosoma rodhaini SROB_0000153901 N 0.480
SROB_0000500401 Schistosoma rodhaini SROB_0000500401 N 0.480
SROB_0001061001 Schistosoma rodhaini SROB_0001061001 N 0.486
SSLN_0000493501 Schistocephalus solidus SSLN_0000493501 N 0.498
SSLN_0001302101 Schistocephalus solidus SSLN_0001302101 N 0.427
SSTP_0000371800 Strongyloides stercoralis SSTP_0000371800 N 0.439
SVE_0494300 Strongyloides venezuelensis SVE_0494300 N 0.439
T265_10726 Opisthorchis viverrini T265_10726 N 0.488
T265_12733 Opisthorchis viverrini T265_12733 N 0.487
T265_14643 Opisthorchis viverrini T265_14643 N 0.472
TCLT_0000879501 Thelazia callipaeda TCLT_0000879501 N 0.452
TCNE_0000567001 Toxocara canis TCNE_0000567001 N 0.452
TELCIR_07111 Teladorsagia circumcincta TELCIR_07111 N 0.471
tetur02g08260 Tetranychus urticae tetur02g08260 N 0.572
tetur02g08340 Tetranychus urticae tetur02g08340 N 0.575
TMUE_s0235000800 Trichuris muris TMUE_s0235000800 N 0.447
TRE_0000506801 Trichobilharzia regenti TRE_0000506801 N 0.454
TRE_0000690301 Trichobilharzia regenti TRE_0000690301 N 0.467
TsM_000115400 Taenia solium TsM_000115400 N 0.497
TTAC_0000225801 Hydatigera taeniaeformis TTAC_0000225801 N 0.468
TTRE_0000338301 Trichuris trichiura TTRE_0000338301 N 0.463
hmg-1.2 Caenorhabditis elegans WBGene00001972 N 0.439
WBGene00245261 Onchocerca volvulus WBGene00245261 N 0.452
WUBG_12099 Wuchereria bancrofti WUBG_12099 N 0.418
hmgb2.S Xenopus laevis XB-GENE-1000251 N 0.432
YQE_03203 Dendroctonus ponderosae YQE_03203 N 0.558