CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
chd4b
(
Danio rerio
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
ENSDARG00000025789
T327842_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000124629
Sox
167
212
SLTNYKAFSQFVRPLIAAKNPKIAVSKMMMVLGAKWREFSTNNPMR
Links
Other
Sox
family TFs
Other
Danio rerio
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R008590
Calypte anna
Aan_R008590
I
0.000
Afo_R000623
Aptenodytes forsteri
Afo_R000623
I
0.000
Brh_R008967
Buceros rhinoceros
Brh_R008967
I
0.000
ZBTB49
Anolis carolinensis
ENSACAG00000010957
I
0.000
ENSAMEG00000013670
Ailuropoda melanoleuca
ENSAMEG00000013670
I
0.000
ENSAPLG00000003489
Anas platyrhynchos
ENSAPLG00000003489
I
0.000
ZBTB49
Bos taurus
ENSBTAG00000014680
I
0.000
ZBTB49
Canis familiaris
ENSCAFG00000015688
I
0.000
ZBTB49
Callithrix jacchus
ENSCJAG00000000119
I
0.000
ZBTB49
Cavia porcellus
ENSCPOG00000007981
I
0.000
ENSCSAG00000016270
Chlorocebus sabaeus
ENSCSAG00000016270
I
0.000
ZBTB49
Dasypus novemcinctus
ENSDNOG00000016261
I
0.000
ZBTB49
Equus caballus
ENSECAG00000013694
I
0.000
ENSFALG00000009426
Ficedula albicollis
ENSFALG00000009426
I
0.000
ZBTB49
Felis catus
ENSFCAG00000015510
I
0.000
ZBTB49
Homo sapiens
ENSG00000168826
D
0.000
ZBTB49
Gallus gallus
ENSGALG00000015009
I
0.000
ZBTB49
Gorilla gorilla
ENSGGOG00000013012
I
0.000
ENSLACG00000007886
Latimeria chalumnae
ENSLACG00000007886
I
0.000
ZBTB49
Loxodonta africana
ENSLAFG00000016590
I
0.000
ENSLOCG00000009974
Lepisosteus oculatus
ENSLOCG00000009974
I
0.000
ZBTB49
Meleagris gallopavo
ENSMGAG00000012706
I
0.000
ENSMICG00000000204
Microcebus murinus
ENSMICG00000000204
I
0.000
ZBTB49
Myotis lucifugus
ENSMLUG00000009904
I
0.000
ZBTB49
Macaca mulatta
ENSMMUG00000023394
I
0.000
ZBTB49
Monodelphis domestica
ENSMODG00000001516
I
0.000
Zbtb49
Mus musculus
ENSMUSG00000029127
I
0.000
ENSNLEG00000016142
Nomascus leucogenys
ENSNLEG00000016142
I
0.000
ENSOARG00000007577
Ovis aries
ENSOARG00000007577
I
0.000
ZBTB49
Oryctolagus cuniculus
ENSOCUG00000007993
I
0.000
ZBTB49
Otolemur garnettii
ENSOGAG00000000988
I
0.000
ENSPANG00000015665
Papio anubis
ENSPANG00000015665
I
0.000
ENSPPYG00000014601
Pongo abelii
ENSPPYG00000014601
I
0.000
ENSPSIG00000015554
Pelodiscus sinensis
ENSPSIG00000015554
I
0.000
ZBTB49
Pan troglodytes
ENSPTRG00000015868
I
0.000
ZBTB49
Pteropus vampyrus
ENSPVAG00000015185
I
0.000
Zbtb49
Rattus norvegicus
ENSRNOG00000005633
I
0.000
ENSSHAG00000008414
Sarcophilus harrisii
ENSSHAG00000008414
I
0.000
ZBTB49
Sus scrofa
ENSSSCG00000008728
I
0.000
ENSSTOG00000000550
Ictidomys tridecemlineatus
ENSSTOG00000000550
I
0.000
ENSTBEG00000005000
Tupaia belangeri
ENSTBEG00000005000
I
0.000
ZBTB49
Taeniopygia guttata
ENSTGUG00000009920
I
0.000
Gfo_R014333
Geospiza fortis
Gfo_R014333
I
0.000
Myotis_brandtii_ZBTB49_10013405
Myotis brandtii
Myotis_brandtii_ZBTB49_10013405
I
0.000
Pvit_18935
Pogona vitticeps
Pvit_18935
I
0.000