G210_3517 (Candida maltosa)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 G210_3517 T329949_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NHP10
M00068_2.00 		Saccharomyces cerevisiae
TCCCCGGC
GCCGGGGA		 PBM
Badis et al.(2008)
NHP10_2069 		0.441 0.493
NHP10
M07496_2.00 		Saccharomyces cerevisiae
YCCCCGGY
RCCGGGGR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0344.1 		0.441 0.493
NHP10
M08604_2.00 		Saccharomyces cerevisiae
TCCCCGGY
RCCGGGGA		 Misc
DeBoer et al.(2011)
YDL002C_502 		0.441 0.493
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMG46245 Sox 134 200

Links

Other Sox family TFs
Other Candida maltosa TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00057p00206030 Amborella trichopoda AMTR_s00057p00206030 N
Aquca_017_00223 Aquilegia coerulea Aquca_017_00223 N
BGIOSGA005119 Oryza indica BGIOSGA005119 N
BRADI2G59937 Brachypodium distachyon BRADI2G59937 N
cassava29582.valid.m1 Manihot esculenta cassava29582.valid.m1 N
cassava29583.valid.m1 Manihot esculenta cassava29583.valid.m1 N
GSMUA_Achr1G11230_001 Musa acuminata GSMUA_Achr1G11230_001 N
LPERR01G37480 Leersia perrieri LPERR01G37480 N
OB01G52060 Oryza brachyantha OB01G52060 N
OBART01G43050 Oryza barthii OBART01G43050 N
OGLUM01G47350 Oryza glumaepatula OGLUM01G47350 N
OLONG_017231 Oryza longistaminata OLONG_017231 N
ONIVA01G48990 Oryza nivara ONIVA01G48990 N
OPUNC01G42000 Oryza punctata OPUNC01G42000 N
orange1.1g001425m.g Citrus sinensis orange1.1g001425m.g N
ORGLA01G0367900 Oryza glaberrima ORGLA01G0367900 N
ORUFI01G46480 Oryza rufipogon ORUFI01G46480 N
OS01G0934300 Oryza sativa OS01G0934300 N
PDK_20s1602441g001 Phoenix dactylifera PDK_20s1602441g001 N
PK02496.1 Cannabis sativa PK02496.1 N
POPTR_0002s20990 Populus trichocarpa POPTR_0002s20990 N
POPTR_0014s12730 Populus trichocarpa POPTR_0014s12730 N
SapurV1A.0155s0080 Salix purpurea SapurV1A.0155s0080 N
Solyc09g074690.2 Solanum lycopersicum Solyc09g074690.2 N
TCM_004566 Theobroma cacao TCM_004566 N
Traes_3B_3142C10C9 Triticum aestivum Traes_3B_3142C10C9 N
Traes_3DL_D4FBDA9DC Triticum aestivum Traes_3DL_D4FBDA9DC N
TRIUR3_34541 Triticum urartu TRIUR3_34541 N
LD Vitis vinifera VIT_07s0104g01580 N