CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLOINDRAFT_224210
(
Rhizophagus irregularis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GLOINDRAFT_224210
T330059_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ESA06073
Sox
93
159
PSKSSNAFIIYRKAYVKELHSRGINLQMTQISPMVSESWKQEPDSVKAEYKRLAEAAKKRYKEMWPS
Links
Other
Sox
family TFs
Other
Rhizophagus irregularis
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aqu1.227127
Amphimedon queenslandica
Aqu1.227127
N
0.423
GLOINDRAFT_13510
Rhizophagus irregularis
GLOINDRAFT_13510
N
0.429
GLOINDRAFT_14799
Rhizophagus irregularis
GLOINDRAFT_14799
N
0.415
GLOINDRAFT_14813
Rhizophagus irregularis
GLOINDRAFT_14813
N
0.474
GLOINDRAFT_15083
Rhizophagus irregularis
GLOINDRAFT_15083
N
0.422
GLOINDRAFT_17167
Rhizophagus irregularis
GLOINDRAFT_17167
N
0.475
GLOINDRAFT_18435
Rhizophagus irregularis
GLOINDRAFT_18435
N
0.422
GLOINDRAFT_209293
Rhizophagus irregularis
GLOINDRAFT_209293
N
0.526
GLOINDRAFT_20940
Rhizophagus irregularis
GLOINDRAFT_20940
N
0.423
GLOINDRAFT_21291
Rhizophagus irregularis
GLOINDRAFT_21291
N
0.513
GLOINDRAFT_22824
Rhizophagus irregularis
GLOINDRAFT_22824
N
0.469
GLOINDRAFT_25683
Rhizophagus irregularis
GLOINDRAFT_25683
N
0.483
GLOINDRAFT_27042
Rhizophagus irregularis
GLOINDRAFT_27042
N
0.482
GLOINDRAFT_27214
Rhizophagus irregularis
GLOINDRAFT_27214
N
0.452
GLOINDRAFT_28904
Rhizophagus irregularis
GLOINDRAFT_28904
N
0.454
GLOINDRAFT_30036
Rhizophagus irregularis
GLOINDRAFT_30036
N
0.454
GLOINDRAFT_31701
Rhizophagus irregularis
GLOINDRAFT_31701
N
0.491
GLOINDRAFT_319204
Rhizophagus irregularis
GLOINDRAFT_319204
N
0.505
GLOINDRAFT_329858
Rhizophagus irregularis
GLOINDRAFT_329858
N
0.440
GLOINDRAFT_33465
Rhizophagus irregularis
GLOINDRAFT_33465
N
0.553
GLOINDRAFT_340908
Rhizophagus irregularis
GLOINDRAFT_340908
N
0.430
GLOINDRAFT_342377
Rhizophagus irregularis
GLOINDRAFT_342377
N
0.444
GLOINDRAFT_342407
Rhizophagus irregularis
GLOINDRAFT_342407
N
0.429
GLOINDRAFT_344515
Rhizophagus irregularis
GLOINDRAFT_344515
N
0.424
GLOINDRAFT_344841
Rhizophagus irregularis
GLOINDRAFT_344841
N
0.445
GLOINDRAFT_34686
Rhizophagus irregularis
GLOINDRAFT_34686
N
0.431
GLOINDRAFT_346927
Rhizophagus irregularis
GLOINDRAFT_346927
N
0.423
GLOINDRAFT_347004
Rhizophagus irregularis
GLOINDRAFT_347004
N
0.488
GLOINDRAFT_347592
Rhizophagus irregularis
GLOINDRAFT_347592
N
0.503
GLOINDRAFT_349586
Rhizophagus irregularis
GLOINDRAFT_349586
N
0.483
GLOINDRAFT_35923
Rhizophagus irregularis
GLOINDRAFT_35923
N
0.475
GLOINDRAFT_36163
Rhizophagus irregularis
GLOINDRAFT_36163
N
0.464
GLOINDRAFT_3645
Rhizophagus irregularis
GLOINDRAFT_3645
N
0.424
GLOINDRAFT_87134
Rhizophagus irregularis
GLOINDRAFT_87134
N
0.422
GLOINDRAFT_9129
Rhizophagus irregularis
GLOINDRAFT_9129
N
0.427