GLOINDRAFT_344515 (Rhizophagus irregularis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 GLOINDRAFT_344515 T330134_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ESA18563 Sox 39 104

Links

Other Sox family TFs
Other Rhizophagus irregularis TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28207.m000107 Ricinus communis 28207.m000107 N
BGIOSGA001546 Oryza indica BGIOSGA001546 N
cassava38982.m1 Manihot esculenta cassava38982.m1 N
cassava43296.valid.m1 Manihot esculenta cassava43296.valid.m1 N
Ca_05488 Cicer arietinum Ca_05488 N
Cla020705 Citrullus lanatus Cla020705 N
Cucsa.283560 Cucumis sativus Cucsa.283560 N
Eucgr.J01501 Eucalyptus grandis Eucgr.J01501 N
evm.TU.supercontig_3.514 Carica papaya evm.TU.supercontig_3.514 N
GLYMA20G24950 Glycine max GLYMA20G24950 N
GRMZM2G060544 Zea mays GRMZM2G060544 N
GRMZM2G073044 Zea mays GRMZM2G073044 N
GRMZM2G386674 Zea mays GRMZM2G386674 N
GSMUA_Achr2G22720_001 Musa acuminata GSMUA_Achr2G22720_001 N
GSMUA_Achr4G06820_001 Musa acuminata GSMUA_Achr4G06820_001 N
LPERR01G15290 Leersia perrieri LPERR01G15290 N
MDP0000581845 Malus domestica MDP0000581845 N
MDP0000591819 Malus domestica MDP0000591819 N
MTR_1g110840 Medicago truncatula MTR_1g110840 N
MTR_6g054080 Medicago truncatula MTR_6g054080 N
MTR_6g054150 Medicago truncatula MTR_6g054150 N
OBART01G17510 Oryza barthii OBART01G17510 N
OGLUM01G20320 Oryza glumaepatula OGLUM01G20320 N
OLONG_008015 Oryza longistaminata OLONG_008015 N
OMERI01G16320 Oryza meridionalis OMERI01G16320 N
ONIVA01G19320 Oryza nivara ONIVA01G19320 N
OPUNC01G18000 Oryza punctata OPUNC01G18000 N
ORUFI01G19440 Oryza rufipogon ORUFI01G19440 N
OS01G0511000 Oryza sativa OS01G0511000 N
Pavir.Ea01295 Panicum virgatum Pavir.Ea01295 N
Pavir.Eb02390 Panicum virgatum Pavir.Eb02390 N
Pavir.J01483 Panicum virgatum Pavir.J01483 N
PK04625.1 Cannabis sativa PK04625.1 N
SapurV1A.0851s0010 Salix purpurea SapurV1A.0851s0010 N
Sb01g032580 Sorghum bicolor Sb01g032580 N
Sb09g025700 Sorghum bicolor Sb09g025700 N
Sb09g030780 Sorghum bicolor Sb09g030780 N
Si004887m.g Setaria italica Si004887m.g N
Si022660m.g Setaria italica Si022660m.g N
Thhalv10019048m.g Eutrema salsugineum Thhalv10019048m.g N
Traes_4BL_D44ACD58E Triticum aestivum Traes_4BL_D44ACD58E N