CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LOAG_04936
(
Loa loa
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
LOAG_04936
T330913_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFO23550.1
Sox
10
79
RGKTSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMSDDEKRRFFELAQKDAERYQAEVAAYG
EFO23550.1
Sox
97
165
PKRALSAFFFFSHDKRPEVQQQHPEWKVGQVAQELGRFWKALGEEERAVYERKALEDKERYAEEMRNYK
Links
Other
Sox
family TFs
Other
Loa loa
TFs
169 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL011380
Aedes aegypti
AAEL011380
N
0.439
AAI68534
Xenopus tropicalis
AAI68534
N
0.428
AALB006743
Anopheles albimanus
AALB006743
N
0.439
AARA010318
Anopheles arabiensis
AARA010318
N
0.439
AATE018776
Anopheles atroparvus
AATE018776
N
0.439
ACAC_0001052301
Angiostrongylus cantonensis
ACAC_0001052301
N
0.632
ACEP16613
Atta cephalotes
ACEP16613
N
0.439
ACOC_0000768601
Angiostrongylus costaricensis
ACOC_0000768601
N
0.714
ACUA021022
Anopheles culicifacies
ACUA021022
N
0.439
ACYPI007949
Acyrthosiphon pisum
ACYPI007949
N
0.465
ADAC001494
Anopheles darlingi
ADAC001494
N
0.439
ADIR011701
Anopheles dirus
ADIR011701
N
0.439
AEPI002924
Anopheles epiroticus
AEPI002924
N
0.439
AFAF003948
Anopheles farauti
AFAF003948
N
0.439
AFUN010134
Anopheles funestus
AFUN010134
N
0.439
AGAP000005
Anopheles gambiae
AGAP000005
N
0.439
AMAM015540
Anopheles maculatus
AMAM015540
N
0.439
AMEC021909
Anopheles melas
AMEC021909
N
0.439
AMEM017336
Anopheles merus
AMEM017336
N
0.439
AMIN005344
Anopheles minimus
AMIN005344
N
0.439
ANCCAN_10156
Ancylostoma caninum
ANCCAN_10156
N
0.662
ANCCEY_10333
Ancylostoma ceylanicum
ANCCEY_10333
N
0.627
Aqu1.227714
Amphimedon queenslandica
Aqu1.227714
N
0.434
ASIM_0000048401
Anisakis simplex
ASIM_0000048401
N
0.700
ASIS000124
Anopheles sinensis
ASIS000124
N
0.439
ASU_03902
Ascaris suum
ASU_03902
N
0.738
augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2
N
0.653
A_00070
Schistosoma haematobium
A_00070
N
0.420
Bm4180
Brugia malayi
Bm4180
N
0.741
BXY_1555400
Bursaphelenchus xylophilus
BXY_1555400
N
0.582
BXY_1714600
Bursaphelenchus xylophilus
BXY_1714600
N
0.478
CapteG158220
Capitella teleta
CapteG158220
N
0.512
CBG17468
Caenorhabditis briggsae
CBG17468
N
0.681
CBN17977
Caenorhabditis brenneri
CBN17977
N
0.674
Cflo_05895--XP_001121384.1_APIME
Camponotus floridanus
Cflo_05895--XP_001121384.1_APIME
N
0.443
CGI_10023724
Crassostrea gigas
CGI_10023724
N
0.498
CJA09678
Caenorhabditis japonica
CJA09678
N
0.678
CJA42049
Caenorhabditis japonica
CJA42049
N
0.647
CPIJ014043
Culex quinquefasciatus
CPIJ014043
N
0.424
CpipJ_CPIJ014043
Culex pipiens
CpipJ_CPIJ014043
N
0.424
CRE02943
Caenorhabditis remanei
CRE02943
N
0.633
csin110255
Clonorchis sinensis
csin110255
N
0.416
D915_00818
Fasciola hepatica
D915_00818
N
0.441
D917_01254
Trichinella nativa
D917_01254
N
0.611
D917_08189
Trichinella nativa
D917_08189
N
0.643
D918_07195
Trichuris suis
D918_07195
N
0.668
DAPPUDRAFT_232871
Daphnia pulex
DAPPUDRAFT_232871
N
0.452
DAPPUDRAFT_306496
Daphnia pulex
DAPPUDRAFT_306496
N
0.436
DILT_0001497901
Diphyllobothrium latum
DILT_0001497901
N
0.418
DME_0001055201
Dracunculus medinensis
DME_0001055201
N
0.710
ECANG7_02036
Echinococcus canadensis
ECANG7_02036
N
0.442
EEL_0000068601
Elaeophora elaphi
EEL_0000068601
N
0.741
EFV53345
Trichinella spiralis
EFV53345
N
0.605
EFV57410
Trichinella spiralis
EFV57410
N
0.611
EmuJ_001049000
Echinococcus multilocularis
EmuJ_001049000
N
0.462
ENSAMXG00000014031
Astyanax mexicanus
ENSAMXG00000014031
N
0.426
ENSBTAG00000031711
Bos taurus
ENSBTAG00000031711
N
0.433
ENSCJAG00000004401
Callithrix jacchus
ENSCJAG00000004401
N
0.418
ENSCJAG00000007419
Callithrix jacchus
ENSCJAG00000007419
N
0.419
ENSCJAG00000014214
Callithrix jacchus
ENSCJAG00000014214
N
0.433
ENSCJAG00000022832
Callithrix jacchus
ENSCJAG00000022832
N
0.419
ENSCJAG00000033322
Callithrix jacchus
ENSCJAG00000033322
N
0.433
ENSCSAG00000013078
Chlorocebus sabaeus
ENSCSAG00000013078
N
0.433
ENSDNOG00000005537
Dasypus novemcinctus
ENSDNOG00000005537
N
0.419
ENSMICG00000016224
Microcebus murinus
ENSMICG00000016224
N
0.416
ENSMPUG00000018359
Mustela putorius furo
ENSMPUG00000018359
N
0.433
ENSOCUG00000004133
Oryctolagus cuniculus
ENSOCUG00000004133
N
0.416
ENSOCUG00000021132
Oryctolagus cuniculus
ENSOCUG00000021132
N
0.424
HMGB3
Oryctolagus cuniculus
ENSOCUG00000024959
N
0.433
ENSPFOG00000008464
Poecilia formosa
ENSPFOG00000008464
N
0.427
Hmgb2l1
Rattus norvegicus
ENSRNOG00000013167
N
0.416
RGD1561694
Rattus norvegicus
ENSRNOG00000029107
N
0.416
Hmgb2
Rattus norvegicus
ENSRNOG00000033321
N
0.416
LOC688583
Rattus norvegicus
ENSRNOG00000050910
N
0.433
ENSSSCG00000020770
Sus scrofa
ENSSSCG00000020770
N
0.433
ENSSSCG00000024283
Sus scrofa
ENSSSCG00000024283
N
0.433
ENSSTOG00000012404
Ictidomys tridecemlineatus
ENSSTOG00000012404
N
0.432
hmgb1a
Takifugu rubripes
ENSTRUG00000008452
N
0.430
EVEC_0000577301
Enterobius vermicularis
EVEC_0000577301
N
0.738
Dsp1
Drosophila melanogaster
FBgn0011764
N
0.428
GA11488
Drosophila pseudoobscura
FBgn0071539
N
0.428
GF19115
Drosophila ananassae
FBgn0096126
N
0.428
GG17955
Drosophila erecta
FBgn0110175
N
0.428
GH12282
Drosophila grimshawi
FBgn0119761
N
0.424
GI10980
Drosophila mojavensis
FBgn0133743
N
0.424
GD17278
Drosophila simulans
FBgn0188840
N
0.428
GJ19445
Drosophila virilis
FBgn0206588
N
0.424
GK25058
Drosophila willistoni
FBgn0227017
N
0.424
GE17263
Drosophila yakuba
FBgn0234741
N
0.428
fgenesh2_pm.scaffold_24000033
Branchiostoma floridae
fgenesh2_pm.scaffold_24000033
N
0.475
genemark-nMf.1.1.scaf06964-processed-gene-0.3
Meloidogyne floridensis
genemark-nMf.1.1.scaf06964-processed-gene-0.3
N
0.653
GPUH_0001544201
Gongylonema pulchrum
GPUH_0001544201
N
0.620
Hba_13817
Heterorhabditis bacteriophora
Hba_13817
N
0.710
HCOI00860100
Haemonchus contortus
HCOI00860100
N
0.714
HDID_0000237901
Hymenolepis diminuta
HDID_0000237901
N
0.444
HelroG157726
Helobdella robusta
HelroG157726
N
0.431
HelroG157878
Helobdella robusta
HelroG157878
N
0.452
HMEL007340
Heliconius melpomene
HMEL007340
N
0.432
HmN_000466000
Hymenolepis microstoma
HmN_000466000
N
0.444
HNAJ_0001249801
Hymenolepis nana
HNAJ_0001249801
N
0.444
Hsal_13110--XP_001121384.1_APIME
Harpegnathos saltator
Hsal_13110--XP_001121384.1_APIME
N
0.443
ISCW017350
Ixodes scapularis
ISCW017350
N
0.485
L596_g22130
Steinernema carpocapsae
L596_g22130
N
0.723
L889_g13533
Steinernema feltiae
L889_g13533
N
0.721
L892_g17551
Steinernema scapterisci
L892_g17551
N
0.726
L893_g5947
Steinernema glaseri
L893_g5947
N
0.726
LCUP007363
Lucilia cuprina
LCUP007363
N
0.424
LDEC006842
Leptinotarsa decemlineata
LDEC006842
N
0.420
MCOS_0000526101
Mesocestoides corti
MCOS_0000526101
N
0.462
MCOS_0000588101
Mesocestoides corti
MCOS_0000588101
N
0.419
MhA1_Contig113.frz3.gene9
Meloidogyne hapla
MhA1_Contig113.frz3.gene9
N
0.597
Minc01077
Meloidogyne incognita
Minc01077
N
0.521
Minc03268
Meloidogyne incognita
Minc03268
N
0.597
Minc08988
Meloidogyne incognita
Minc08988
N
0.597
nAv.1.0.1.g02101
Acanthocheilonema viteae
nAv.1.0.1.g02101
N
0.741
NBR_0000911001
Nippostrongylus brasiliensis
NBR_0000911001
N
0.714
nDi.2.2.2.g04979
Dirofilaria immitis
nDi.2.2.2.g04979
N
0.741
NECAME_09126
Necator americanus
NECAME_09126
N
0.714
nLs.2.1.2.g00300
Litomosoides sigmodontis
nLs.2.1.2.g00300
N
0.640
nRc.2.0.1.g43473
Romanomermis culicivorax
nRc.2.0.1.g43473
N
0.641
NV15664
Nasonia vitripennis
NV15664
N
0.459
PEQ_0000150901
Parascaris equorum
PEQ_0000150901
N
0.738
PHUM006290
Pediculus humanus
PHUM006290
N
0.430
Ppa-hmg-1.2
Pristionchus pacificus
PPA02361
N
0.699
PTRK_0000986200
Parastrongyloides trichosuri
PTRK_0000986200
N
0.668
PXEA_0000566701
Protopolystoma xenopodis
PXEA_0000566701
N
0.444
PXEA_0000637001
Protopolystoma xenopodis
PXEA_0000637001
N
0.462
PXEA_0002175501
Protopolystoma xenopodis
PXEA_0002175501
N
0.440
RSKR_0000605700
Rhabditophanes kr3021
RSKR_0000605700
N
0.649
Sakowv30042012m.g
Saccoglossus kowalevskii
Sakowv30042012m.g
N
0.459
SBAD_0000405201
Soboliphyme baturini
SBAD_0000405201
N
0.647
scaffold580-EXSNAP2012.5
Pristionchus exspectatus
scaffold580-EXSNAP2012.5
N
0.699
SCUD_0000020101
Schistosoma curassoni
SCUD_0000020101
N
0.433
SCUD_0001034301
Schistosoma curassoni
SCUD_0001034301
N
0.420
SINV22586
Solenopsis invicta
SINV22586
N
0.439
Sjc_0051340
Schistosoma japonicum
Sjc_0051340
N
0.423
SMAR013695
Strigamia maritima
SMAR013695
N
0.463
Smp_000980
Schistosoma mansoni
Smp_000980
N
0.433
Smp_100090
Schistosoma mansoni
Smp_100090
N
0.417
SMRZ_0000842001
Schistosoma margrebowiei
SMRZ_0000842001
N
0.420
SMTD_0001017101
Schistosoma mattheei
SMTD_0001017101
N
0.420
SMTD_0001194601
Schistosoma mattheei
SMTD_0001194601
N
0.433
SMU15027649
Schmidtea mediterranea
SMU15027649
N
0.445
SMU15030256
Schmidtea mediterranea
SMU15030256
N
0.425
SMUV_0000232601
Syphacia muris
SMUV_0000232601
N
0.734
SPAL_0001030300
Strongyloides papillosus
SPAL_0001030300
N
0.668
SPU_005572
Strongylocentrotus purpuratus
SPU_005572
N
0.433
SROB_0000153901
Schistosoma rodhaini
SROB_0000153901
N
0.433
SROB_0000500401
Schistosoma rodhaini
SROB_0000500401
N
0.417
SSLN_0000493501
Schistocephalus solidus
SSLN_0000493501
N
0.418
SSLN_0001302101
Schistocephalus solidus
SSLN_0001302101
N
0.462
SSTP_0000371800
Strongyloides stercoralis
SSTP_0000371800
N
0.668
SVE_0494300
Strongyloides venezuelensis
SVE_0494300
N
0.668
T265_12733
Opisthorchis viverrini
T265_12733
N
0.443
T265_14643
Opisthorchis viverrini
T265_14643
N
0.416
TCLT_0000879501
Thelazia callipaeda
TCLT_0000879501
N
0.738
TCNE_0000567001
Toxocara canis
TCNE_0000567001
N
0.738
TELCIR_06008
Teladorsagia circumcincta
TELCIR_06008
N
0.582
TELCIR_07111
Teladorsagia circumcincta
TELCIR_07111
N
0.714
tetur02g08260
Tetranychus urticae
tetur02g08260
N
0.482
tetur02g08340
Tetranychus urticae
tetur02g08340
N
0.479
TMUE_s0235000800
Trichuris muris
TMUE_s0235000800
N
0.653
TsM_000115400
Taenia solium
TsM_000115400
N
0.462
TTAC_0000225801
Hydatigera taeniaeformis
TTAC_0000225801
N
0.442
TTRE_0000338301
Trichuris trichiura
TTRE_0000338301
N
0.668
hmg-1.2
Caenorhabditis elegans
WBGene00001972
N
0.674
WBGene00245261
Onchocerca volvulus
WBGene00245261
N
0.741
WUBG_12099
Wuchereria bancrofti
WUBG_12099
N
0.689
YQE_03203
Dendroctonus ponderosae
YQE_03203
N
0.439