CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LotgiG239042
(
Lottia gigantea
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
LotgiG239042
T330954_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LotgiP239042
Sox
142
215
PKKPSNVFQIYCKEQKQKVQAVYFQEFNEEIAHHELTRRLAQKWHVMSQEEKKMYYEMHDIENERYQRELKVYE
Links
Other
Sox
family TFs
Other
Lottia gigantea
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh2_pg.C_4640004
Branchiostoma floridae
estExt_fgenesh2_pg.C_4640004
N
0.442
estExt_fgenesh2_pg.C_7290004
Branchiostoma floridae
estExt_fgenesh2_pg.C_7290004
N
0.442
NEMVEDRAFT_v1g243341
Nematostella vectensis
NEMVEDRAFT_v1g243341
N
0.469
TriadG7110
Trichoplax adhaerens
TriadG7110
N
0.467