TPHA_0P00560 (Tetrapisispora phaffii)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 TPHA_0P00560 T332969_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NHP10
M00068_2.00 		Saccharomyces cerevisiae
TCCCCGGC
GCCGGGGA		 PBM
Badis et al.(2008)
NHP10_2069 		0.563 0.662
NHP10
M07496_2.00 		Saccharomyces cerevisiae
YCCCCGGY
RCCGGGGR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0344.1 		0.563 0.662
NHP10
M08604_2.00 		Saccharomyces cerevisiae
TCCCCGGY
RCCGGGGA		 Misc
DeBoer et al.(2011)
YDL002C_502 		0.563 0.662
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CCE66214 Sox 94 158

Links

Other Sox family TFs
Other Tetrapisispora phaffii TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ALNC14_135020 Albugo laibachii ALNC14_135020 N
estExt_fgenesh1_kg.C_130920 Phytophthora capsici estExt_fgenesh1_kg.C_130920 N
F443_02929 Phytophthora parasitica F443_02929 N
fgenesh_scip_prom.28083.4190 Phytophthora lateralis fgenesh_scip_prom.28083.4190 N
HpaG808818 Hyaloperonospora arabidopsidis HpaG808818 N
maker-par_contig_2685-fgenesh-gene-0.0 Pythium arrhenomanes maker-par_contig_2685-fgenesh-gene-0.0 N
maker-pve_contig_452-fgenesh-gene-0.7 Pythium vexans maker-pve_contig_452-fgenesh-gene-0.7 N
Phyra73254 Phytophthora ramorum Phyra73254 N
Physo131254 Phytophthora sojae Physo131254 N
PYU1_G009865 Pythium ultimum PYU1_G009865 N