CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
YALI0_D17996g
(
Yarrowia lipolytica
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
YALI0_D17996g
T333315_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CAG81157
Sox
157
228
PKRPQNAYIIFCEREKEGVRASMELEADGETFDLTRALADSWKELGQEGRQPYYKLYQDDRRRYLEEMSEYV
Links
Other
Sox
family TFs
Other
Yarrowia lipolytica
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BATDEDRAFT_7474
Batrachochytrium dendrobatidis
BATDEDRAFT_7474
N
0.429
CORT_0B03230
Candida orthopsilosis
CORT_0B03230
N
0.426
GNLVRS01_PISO0G08322g
Millerozyma farinosa
GNLVRS01_PISO0G08322g
N
0.430
GNLVRS01_PISO0H08323g
Millerozyma farinosa
GNLVRS01_PISO0H08323g
N
0.430
gwh1.8.1.855.1
Pichia stipitis
gwh1.8.1.855.1
N
0.456
KAFR_0F02510
Kazachstania africana
KAFR_0F02510
I
0.422
Kpol_1045p57
Vanderwaltozyma polyspora
Kpol_1045p57
I
0.443
NCAS_0A10110
Naumovozyma castellii
NCAS_0A10110
I
0.472
NDAI_0A07360
Naumovozyma dairenensis
NDAI_0A07360
I
0.462
PICST_12709
Scheffersomyces stipitis
PICST_12709
N
0.456
Scas_Contig482.3
Saccharomyces castellii
Scas_Contig482.3
I
0.472
SPAPADRAFT_141112
Spathaspora passalidarum
SPAPADRAFT_141112
N
0.430
TBLA_0A00160
Tetrapisispora blattae
TBLA_0A00160
I
0.417
TPHA_0P00560
Tetrapisispora phaffii
TPHA_0P00560
I
0.426