CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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EDI_065970
(
Entamoeba dispar
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
EDI_065970
T333411_2.00
EuPathDB (2015-Mar-30)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDI_065970
Sox
1
37
MTTLSNMWKELPDSEKEKYLEIAKQNKSKERKCFNED
Links
Other
Sox
family TFs
Other
Entamoeba dispar
TFs
122 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29851.m002498
Ricinus communis
29851.m002498
I
VRN1
Arabidopsis thaliana
AT3G18990
D
Bo1g115980
Brassica oleracea
Bo1g115980
I
Bo3g071890
Brassica oleracea
Bo3g071890
I
Bo5g116790
Brassica oleracea
Bo5g116790
I
Bostr.19424s0762
Boechera stricta
Bostr.19424s0762
I
Bra001729
Brassica rapa
Bra001729
I
Bra022376
Brassica rapa
Bra022376
I
Bra037544
Brassica rapa
Bra037544
I
Cagra.5105s0003
Capsella grandiflora
Cagra.5105s0003
I
Carubv10015637m.g
Capsella rubella
Carubv10015637m.g
I
cassava29880.valid.m1
Manihot esculenta
cassava29880.valid.m1
I
chr2.CM0262.200.nc
Lotus japonicus
chr2.CM0262.200.nc
I
chr2.CM0308.470.nd
Lotus japonicus
chr2.CM0308.470.nd
I
Ciclev10028642m.g
Citrus clementina
Ciclev10028642m.g
I
evm.TU.supercontig_62.76
Carica papaya
evm.TU.supercontig_62.76
I
gene31955-v1.0-hybrid
Fragaria vesca
gene31955-v1.0-hybrid
I
Gorai.002G006500
Gossypium raimondii
Gorai.002G006500
I
Gorai.005G240900
Gossypium raimondii
Gorai.005G240900
I
Gorai.012G150900
Gossypium raimondii
Gorai.012G150900
I
Gorai.013G040000
Gossypium raimondii
Gorai.013G040000
I
orange1.1g016655m.g
Citrus sinensis
orange1.1g016655m.g
I
PK10791.1
Cannabis sativa
PK10791.1
I
POPTR_0004s15400
Populus trichocarpa
POPTR_0004s15400
I
POPTR_0009s11170
Populus trichocarpa
POPTR_0009s11170
I
PRUPE_ppa006275mg
Prunus persica
PRUPE_ppa006275mg
I
SapurV1A.0090s0340
Salix purpurea
SapurV1A.0090s0340
I
SapurV1A.0979s0040
Salix purpurea
SapurV1A.0979s0040
I
SapurV1A.2089s0010
Salix purpurea
SapurV1A.2089s0010
I
TCM_006971
Theobroma cacao
TCM_006971
I
Thhalv10021075m.g
Eutrema salsugineum
Thhalv10021075m.g
I