Alligator_sinensis_CCG000354.1 (Alligator sinensis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Alligator_sinensis_CCG000354.1 T333553_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Sox12
M00205_2.00 		Mus musculus
HWTTGTBNNN
NNNVACAAWD		 PBM
Badis et al.(2009)
Sox12_3957 		0.741 0.986
SOX12
M05789_2.00 		Homo sapiens
NATTGTTCGGK
MCCGAACAATN		 SELEX
Yin et al.(2017)
SOX12_eDBD_HT-SELEX 		0.741 0.986
SOX12
M05790_2.00 		Homo sapiens
YATTGTTCBKT
AMVGAACAATR		 SELEX
Yin et al.(2017)
SOX12_eDBD_Methyl-HT-SELEX 		0.741 0.986
SOX4
M01026_2.00 		Homo sapiens
AACAAWGR
YCWTTGTT		 PBM
Scharer et al.(2009)
Sox4 		0.671 0.870
Sox4
M00213_2.00 		Mus musculus
NNVACAAWD
HWTTGTBNN		 PBM
Badis et al.(2009)
Sox4_2941 		0.671 0.870
SOX4
M03496_2.00 		Homo sapiens
NAACAATTKCAGTGTT
AACACTGMAATTGTTN		 SELEX
Jolma et al.(2013)
SOX4_1 		0.671 0.870
SOX4
M05765_2.00 		Homo sapiens
NRACAAWGVV
BBCWTTGTYN		 SELEX
Yin et al.(2017)
SOX4_eDBD_HT-SELEX 		0.671 0.870
SOX4
M09388_2.00 		Homo sapiens
BYCTTTGTYYBB
VVRRACAAAGRV		 Misc
Kulakovskiy et al.(2013)
SOX4_HUMAN.H11MO.0.B 		0.671 0.870
Sox4
M09410_2.00 		Mus musculus
BYCTTTGTYYBB
VVRRACAAAGRV		 Misc
Kulakovskiy et al.(2013)
SOX4_MOUSE.H11MO.0.A 		0.671 0.870
Sox4
M09641_2.00 		Mus musculus
BCWTTGTYCN
NGRACAAWGV		 Misc
Heinz et al.(2010)
proB-Sox4_GSE50066 		0.671 0.870
SOX4
M11301_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX4_Q3 		0.671 0.870
SOX4
M11302_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX4_Q5_02 		0.671 0.870
SOX4
M11303_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX4_Q5 		0.671 0.870
SOX4
M05766_2.00 		Homo sapiens
NRACAAWGVV
BBCWTTGTYN		 SELEX
Yin et al.(2017)
SOX4_eDBD_Methyl-HT-SELEX 		0.671 0.870
Sox11
M00210_2.00 		Mus musculus
WTTGTBNNN
NNNVACAAW		 PBM
Badis et al.(2009)
Sox11_2266 		0.671 0.855
Sox11
M03541_2.00 		Mus musculus
AACAATTKCAGTGTT
AACACTGMAATTGTT		 SELEX
Jolma et al.(2013)
Sox11_1 		0.671 0.855
SOX11
M11326_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX11_Q6 		0.671 0.855
Sox14
M03971_2.00 		Drosophila melanogaster
BTGTWCGGTR
YACCGWACAV		 SELEX
Nitta et al.(2015)
Sox14_1 		0.606 0.696
Sox14
M03972_2.00 		Drosophila melanogaster
VACAATDNCATTGTB
VACAATGNHATTGTB		 SELEX
Nitta et al.(2015)
Sox14_2 		0.606 0.696
Sox14
M06449_2.00 		Drosophila melanogaster
VYYCTTTGTYC
GRACAAAGRRB		 B1H
Zhu et al.(2011)
Sox14_SANGER_10_FBgn0005612 		0.606 0.696
sem-2
M02488_2.00 		Caenorhabditis elegans
NNNHVNNNNN
NNNNNBDNNN		 PBM
Weirauch et al.(2014)
pTH9043 		0.603 0.754
Sox5
M00203_2.00 		Mus musculus
ATTGTBNN
NNVACAAT		 PBM
Badis et al.(2009)
Sox5_3459 		0.586 0.580
Sox13
M00212_2.00 		Mus musculus
RAACAATW
WATTGTTY		 PBM
Badis et al.(2009)
Sox13_1718 		0.586 0.580
SOX5
M05894_2.00 		Homo sapiens
DVACAATRVN
NBYATTGTBH		 SMiLE-seq
Isakova et al.(2017)
SOX5 		0.586 0.580
Sox5
M02719_2.00 		Mus musculus
NAACAAT
ATTGTTN		 SELEX
Mathelier et al.(2014)
MA0087.1 		0.586 0.580
SOX13
M08166_2.00 		Homo sapiens
NNACAATGVNN
NNBCATTGTNN		 ChIP-seq
Mathelier et al.(2014)
MA1120.1 		0.586 0.580
SOX5
M09390_2.00 		Homo sapiens
NAACAATN
NATTGTTN		 Misc
Kulakovskiy et al.(2013)
SOX5_HUMAN.H11MO.0.C 		0.586 0.580
Sox5
M09404_2.00 		Mus musculus
NAACAATN
NATTGTTN		 Misc
Kulakovskiy et al.(2013)
SOX5_MOUSE.H11MO.0.C 		0.586 0.580
SOX5
M11309_2.00 		Homo sapiens
NNAACAATNN
NNATTGTTNN		 Transfac
Matys et al.(2006)
V$SOX5_01 		0.586 0.580
SOX5
M11310_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX5_Q5 		0.586 0.580
Sox6
M00828_2.00 		Mus musculus
WTTGTNNNN
NNNNACAAW		 PBM
Weirauch et al.(2013)
pTH3862 		0.586 0.565
SOX6
M05892_2.00 		Homo sapiens
DRACAATRVN
NBYATTGTYH		 SMiLE-seq
Isakova et al.(2017)
SOX6 		0.586 0.565
Sox6
M08169_2.00 		Mus musculus
BCWTTGTYYY
RRRACAAWGV		 ChIP-seq
Mathelier et al.(2014)
MA0515.1 		0.586 0.565
Sox6
M09640_2.00 		Mus musculus
BHWTTGTBNN
NNVACAAWDV		 Misc
Heinz et al.(2010)
Myotubes-Sox6_GSE32627 		0.586 0.565
SOX6
M11300_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX6_Q5 		0.586 0.565
Sox15
M00202_2.00 		Mus musculus
WTTVWNNNN
NNNNWBAAW		 PBM
Badis et al.(2009)
Sox15_3457 		0.582 0.667
SOX15
M03508_2.00 		Homo sapiens
AACAATAMCATTGTT
AACAATGKTATTGTT		 SELEX
Jolma et al.(2013)
SOX15_1 		0.582 0.652
SOX15
M03509_2.00 		Homo sapiens
ATCAATAMCATTGAT
ATCAATGKTATTGAT		 SELEX
Jolma et al.(2013)
SOX15_2 		0.582 0.652
SOX15
M03510_2.00 		Homo sapiens
ATGAATAACATTCAT
ATGAATGTTATTCAT		 SELEX
Jolma et al.(2013)
SOX15_3 		0.582 0.652
SOX15
M05893_2.00 		Homo sapiens
YYWTTGTNHN
NDNACAAWRR		 SMiLE-seq
Isakova et al.(2017)
SOX15 		0.582 0.652
SOX15
M11308_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX15_Q3 		0.582 0.652
D
M03969_2.00 		Drosophila melanogaster
AMVGAACAAT
ATTGTTCBKT		 SELEX
Nitta et al.(2015)
D_1 		0.577 0.652
D
M03970_2.00 		Drosophila melanogaster
NAACAATDNCATTGTTN
NAACAATGNHATTGTTN		 SELEX
Nitta et al.(2015)
D_2 		0.577 0.652
Sox21b
M03983_2.00 		Drosophila melanogaster
NAACAMTWNCAKTGTTB
VAACAMTGNWAKTGTTN		 SELEX
Nitta et al.(2015)
Sox21b_1 		0.577 0.652
D
M06559_2.00 		Drosophila melanogaster
BCYWTTGTTNT
ANAACAAWRGV		 B1H
Mathelier et al.(2014)
MA0445.1 		0.577 0.652
D
M06448_2.00 		Drosophila melanogaster
BCYATTGTYNW
WNRACAATRGV		 B1H
Zhu et al.(2011)
D_NAR_FBgn0000411 		0.577 0.652
D
M09694_2.00 		Drosophila melanogaster
RACAAWRGVH
DBCYWTTGTY		 Misc
Kulakovskiy et al.(2009)
D 		0.577 0.652
Sox3
M00827_2.00 		Mus musculus
WDTVHNNN
NNNDBAHW		 PBM
Weirauch et al.(2013)
pTH3087 		0.575 0.652
Sox3
M03538_2.00 		Mus musculus
RAACAATRNYATTGTTK
MAACAATRNYATTGTTY		 SELEX
Jolma et al.(2013)
Sox3_1 		0.575 0.652
Sox3
M03539_2.00 		Mus musculus
BATCAATGBYATTGATD
HATCAATRVCATTGATV		 SELEX
Jolma et al.(2013)
Sox3_2 		0.575 0.652
Sox3
M03540_2.00 		Mus musculus
DATGAATKNYATTCATR
YATGAATRNMATTCATH		 SELEX
Jolma et al.(2013)
Sox3_3 		0.575 0.652
SOX3
M05769_2.00 		Homo sapiens
VYATTKTNVS
SBNAMAATRB		 SELEX
Yin et al.(2017)
SOX3_FL_HT-SELEX 		0.575 0.652
Sox3
M08168_2.00 		Mus musculus
CCTTTGTYYB
VRRACAAAGG		 ChIP-seq
Mathelier et al.(2014)
MA0514.1 		0.575 0.652
SOX3
M09391_2.00 		Homo sapiens
BYCWTTGTBYB
VRVACAAWGRV		 Misc
Kulakovskiy et al.(2013)
SOX3_HUMAN.H11MO.0.B 		0.575 0.652
Sox3
M09405_2.00 		Mus musculus
VRVACAAWGGV
BCCWTTGTBYB		 Misc
Kulakovskiy et al.(2013)
SOX3_MOUSE.H11MO.0.C 		0.575 0.652
Sox3
M09639_2.00 		Mus musculus
VACAAWRG
CYWTTGTB		 Misc
Heinz et al.(2010)
NPC-Sox3_GSE33059 		0.575 0.652
SOX3
M05770_2.00 		Homo sapiens
BYATTGTBNN
NNVACAATRV		 SELEX
Yin et al.(2017)
SOX3_FL_Methyl-HT-SELEX 		0.575 0.652
Sox7
M00209_2.00 		Mus musculus
NNNWBAAT
ATTVWNNN		 PBM
Badis et al.(2009)
Sox7_3460 		0.575 0.623
SOX7
M03516_2.00 		Homo sapiens
AACAATRDNHAKTGTT
AACAMTDNHYATTGTT		 SELEX
Jolma et al.(2013)
SOX7_1 		0.575 0.623
SOX7
M03517_2.00 		Homo sapiens
DAACAATKDYAKTGTTN
NAACAMTRHMATTGTTH		 SELEX
Jolma et al.(2013)
SOX7_2 		0.575 0.623
SOX7
M03518_2.00 		Homo sapiens
NATGAATKDCAKTCATN
NATGAMTGHMATTCATN		 SELEX
Jolma et al.(2013)
SOX7_3 		0.575 0.623
SOX7
M05787_2.00 		Homo sapiens
ACAATDNHATTGT
ACAATDNHATTGT		 SELEX
Yin et al.(2017)
SOX7_eDBD_HT-SELEX 		0.575 0.623
SOX7
M11325_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX7_Q2 		0.575 0.623
SOX7
M05788_2.00 		Homo sapiens
ACAATDNHATTGT
ACAATDNHATTGT		 SELEX
Yin et al.(2017)
SOX7_eDBD_Methyl-HT-SELEX 		0.575 0.623
Sox8
M00197_2.00 		Mus musculus
NNNWBAAT
ATTVWNNN		 PBM
Badis et al.(2009)
Sox8_1733 		0.571 0.667
SOX8
M03483_2.00 		Homo sapiens
AACAATRTGCAGTGTT
AACACTGCAYATTGTT		 SELEX
Jolma et al.(2013)
SOX8_1 		0.571 0.667
SOX8
M03484_2.00 		Homo sapiens
ATGAATTKCAGTC
GACTGMAATTCAT		 SELEX
Jolma et al.(2013)
SOX8_2 		0.571 0.667
SOX8
M03485_2.00 		Homo sapiens
RAACAATTKCAGTGTTN
NAACACTGMAATTGTTY		 SELEX
Jolma et al.(2013)
SOX8_3 		0.571 0.667
SOX8
M03486_2.00 		Homo sapiens
HATCAATTKCAGTGATN
NATCACTGMAATTGATD		 SELEX
Jolma et al.(2013)
SOX8_4 		0.571 0.667
SOX8
M03487_2.00 		Homo sapiens
TGAATRTKCAGTCA
TGACTGMAYATTCA		 SELEX
Jolma et al.(2013)
SOX8_5 		0.571 0.667
SOX8
M03488_2.00 		Homo sapiens
AACAATTDCAGTGTT
AACACTGHAATTGTT		 SELEX
Jolma et al.(2013)
SOX8_6 		0.571 0.667
SOX8
M03489_2.00 		Homo sapiens
ATGAATTKCAGTC
GACTGMAATTCAT		 SELEX
Jolma et al.(2013)
SOX8_7 		0.571 0.667
SOX8
M03490_2.00 		Homo sapiens
MATCAATTGCAGTGATK
MATCACTGCAATTGATK		 SELEX
Jolma et al.(2013)
SOX8_8 		0.571 0.667
SOX9
M03501_2.00 		Homo sapiens
DDACAATRV
BYATTGTHH		 SELEX
Jolma et al.(2013)
SOX9_1 		0.571 0.667
SOX9
M03502_2.00 		Homo sapiens
AACAATRTGCAGTGTT
AACACTGCAYATTGTT		 SELEX
Jolma et al.(2013)
SOX9_2 		0.571 0.667
SOX9
M03503_2.00 		Homo sapiens
ATCAATRTKCAGTGAT
ATCACTGMAYATTGAT		 SELEX
Jolma et al.(2013)
SOX9_3 		0.571 0.667
SOX9
M03504_2.00 		Homo sapiens
ATGAATRTKCAGTCAT
ATGACTGMAYATTCAT		 SELEX
Jolma et al.(2013)
SOX9_4 		0.571 0.667
SOX9
M03505_2.00 		Homo sapiens
RAACAATTKCAGTGTTH
DAACACTGMAATTGTTY		 SELEX
Jolma et al.(2013)
SOX9_5 		0.571 0.667
SOX9
M03506_2.00 		Homo sapiens
NATCAATKKYAGTGATN
NATCACTRMMATTGATN		 SELEX
Jolma et al.(2013)
SOX9_6 		0.571 0.667
SOX9
M03507_2.00 		Homo sapiens
NATGAATTKCAGTCATN
NATGACTGMAATTCATN		 SELEX
Jolma et al.(2013)
SOX9_7 		0.571 0.667
SOX8
M05749_2.00 		Homo sapiens
NDAACAATRV
BYATTGTTHN		 SELEX
Yin et al.(2017)
SOX8_eDBD_HT-SELEX 		0.571 0.667
SOX8
M05751_2.00 		Homo sapiens
ACAATRVNNBYATTGT
ACAATRVNNBYATTGT		 SELEX
Yin et al.(2017)
SOX8_FL_HT-SELEX 		0.571 0.667
SOX9
M05767_2.00 		Homo sapiens
HDAACAATRV
BYATTGTTHD		 SELEX
Yin et al.(2017)
SOX9_eDBD_HT-SELEX 		0.571 0.667
SOX9
M02716_2.00 		Homo sapiens
DAACAATRG
CYATTGTTH		 SELEX
Mathelier et al.(2014)
MA0077.1 		0.571 0.667
SOX9
M09389_2.00 		Homo sapiens
RMACAAWGVNNBYHTT
AADRVNNBCWTTGTKY		 Misc
Kulakovskiy et al.(2013)
SOX9_HUMAN.H11MO.0.B 		0.571 0.667
Sox9
M09399_2.00 		Mus musculus
RMACAAWGVNNBYHTT
AADRVNNBCWTTGTKY		 Misc
Kulakovskiy et al.(2013)
SOX9_MOUSE.H11MO.0.A 		0.571 0.667
SOX9
M11304_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX9_09 		0.571 0.667
SOX9
M11305_2.00 		Homo sapiens
NNNDAACAATRRNN
NNYYATTGTTHNNN		 Transfac
Matys et al.(2006)
V$SOX9_B1 		0.571 0.667
SOX9
M11306_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX9_Q4 		0.571 0.667
SOX9
M11307_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX9_Q5 		0.571 0.667
SOX8
M05750_2.00 		Homo sapiens
BYATTGTTNN
NNAACAATRV		 SELEX
Yin et al.(2017)
SOX8_eDBD_Methyl-HT-SELEX 		0.571 0.667
SOX8
M05752_2.00 		Homo sapiens
ACAATRVNNBYATTGT
ACAATRVNNBYATTGT		 SELEX
Yin et al.(2017)
SOX8_FL_Methyl-HT-SELEX 		0.571 0.667
SOX9
M05768_2.00 		Homo sapiens
NNNACAATRS
SYATTGTNNN		 SELEX
Yin et al.(2017)
SOX9_eDBD_Methyl-HT-SELEX 		0.571 0.667
Sox10
M00826_2.00 		Mus musculus
NNNNWBAAT
ATTVWNNNN		 PBM
Weirauch et al.(2013)
pTH1729 		0.571 0.638
SOX10
M03491_2.00 		Homo sapiens
AACAATTKCAGTGTT
AACACTGMAATTGTT		 SELEX
Jolma et al.(2013)
SOX10_1 		0.571 0.638
SOX10
M03492_2.00 		Homo sapiens
AACAATRTKCAGTGTT
AACACTGMAYATTGTT		 SELEX
Jolma et al.(2013)
SOX10_2 		0.571 0.638
SOX10
M03493_2.00 		Homo sapiens
ATCAATTKCAGTGAT
ATCACTGMAATTGAT		 SELEX
Jolma et al.(2013)
SOX10_3 		0.571 0.638
SOX10
M03494_2.00 		Homo sapiens
ATGAATTKCAGTCAT
ATGACTGMAATTCAT		 SELEX
Jolma et al.(2013)
SOX10_4 		0.571 0.638
SOX10
M03495_2.00 		Homo sapiens
TGAATGTKCAGTCA
TGACTGMACATTCA		 SELEX
Jolma et al.(2013)
SOX10_5 		0.571 0.638
Sox10
M03535_2.00 		Mus musculus
AACAATTKCAGTGTT
AACACTGMAATTGTT		 SELEX
Jolma et al.(2013)
Sox10_1 		0.571 0.638
Sox10
M03536_2.00 		Mus musculus
ATCAATTKCAGTGAT
ATCACTGMAATTGAT		 SELEX
Jolma et al.(2013)
Sox10_2 		0.571 0.638
Sox10
M03537_2.00 		Mus musculus
ATGAATTDCAGTCAT
ATGACTGHAATTCAT		 SELEX
Jolma et al.(2013)
Sox10_3 		0.571 0.638
SOX10
M05759_2.00 		Homo sapiens
AACAATRNNNYATTGTT
AACAATRNNNYATTGTT		 SELEX
Yin et al.(2017)
SOX10_eDBD_HT-SELEX 		0.571 0.638
SOX10
M05761_2.00 		Homo sapiens
NACAATRVNNBYATTGTN
NACAATRVNNBYATTGTN		 SELEX
Yin et al.(2017)
SOX10_FL_HT-SELEX 		0.571 0.638
SOX10
M05891_2.00 		Homo sapiens
BBCWWTGTTH
DAACAWWGVV		 SMiLE-seq
Isakova et al.(2017)
SOX10 		0.571 0.638
SOX10
M08165_2.00 		Homo sapiens
NNVACAAAGVN
NBCTTTGTBNN		 ChIP-seq
Mathelier et al.(2014)
MA0442.2 		0.571 0.638
SOX10
M09387_2.00 		Homo sapiens
VAADRVVNBCWTTGTN
NACAAWGVNBBYHTTB		 Misc
Kulakovskiy et al.(2013)
SOX10_HUMAN.H11MO.0.B 		0.571 0.638
Sox10
M09403_2.00 		Mus musculus
VAADRVVNBCWTTGTN
NACAAWGVNBBYHTTB		 Misc
Kulakovskiy et al.(2013)
SOX10_MOUSE.H11MO.0.B 		0.571 0.638
SOX10
M11296_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX10_Q3 		0.571 0.638
SOX10
M11297_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX10_Q6_01 		0.571 0.638
SOX10
M11298_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX10_Q6 		0.571 0.638
SOX10
M05760_2.00 		Homo sapiens
AACAATRSNSYATTGTT
AACAATRSNSYATTGTT		 SELEX
Yin et al.(2017)
SOX10_eDBD_Methyl-HT-SELEX 		0.571 0.638
SOX10
M05762_2.00 		Homo sapiens
NACAATRVNNBYATTGTN
NACAATRVNNBYATTGTN		 SELEX
Yin et al.(2017)
SOX10_FL_Methyl-HT-SELEX 		0.571 0.638
Sox14
M00829_2.00 		Mus musculus
NAACAATD
HATTGTTN		 PBM
Weirauch et al.(2013)
pTH2677 		0.566 0.623
Sox14
M00206_2.00 		Mus musculus
NNNABAAW
WTTVTNNN		 PBM
Badis et al.(2009)
Sox14_2677 		0.566 0.623
SOX14
M03513_2.00 		Homo sapiens
ACAMTAMCATTG
CAATGKTAKTGT		 SELEX
Jolma et al.(2013)
SOX14_1 		0.566 0.623
SOX14
M03514_2.00 		Homo sapiens
NTGAATANCATTCAN
NTGAATGNTATTCAN		 SELEX
Jolma et al.(2013)
SOX14_2 		0.566 0.623
SOX14
M03515_2.00 		Homo sapiens
TCAATWVCATTGA
TCAATGBWATTGA		 SELEX
Jolma et al.(2013)
SOX14_3 		0.566 0.623
Sox21a
M03978_2.00 		Drosophila melanogaster
NMACAMTAVCATTGTKN
NMACAATGBTAKTGTKN		 SELEX
Nitta et al.(2015)
Sox21a_1 		0.566 0.623
Sox21a
M03979_2.00 		Drosophila melanogaster
NNACAMTANCATTGTYH
DRACAATGNTAKTGTNN		 SELEX
Nitta et al.(2015)
Sox21a_2 		0.566 0.623
SOX14
M05783_2.00 		Homo sapiens
NYATTGWNNN
NNNWCAATRN		 SELEX
Yin et al.(2017)
SOX14_eDBD_HT-SELEX 		0.566 0.623
SOX14
M05785_2.00 		Homo sapiens
NCGAACAATK
MATTGTTCGN		 SELEX
Yin et al.(2017)
SOX14_FL_HT-SELEX 		0.566 0.623
SOX14
M05784_2.00 		Homo sapiens
NYATTGTNNN
NNNACAATRN		 SELEX
Yin et al.(2017)
SOX14_eDBD_Methyl-HT-SELEX 		0.566 0.623
SOX14
M05786_2.00 		Homo sapiens
NATTGTTYGB
VCRAACAATN		 SELEX
Yin et al.(2017)
SOX14_FL_Methyl-HT-SELEX 		0.566 0.623
Sox21
M00208_2.00 		Mus musculus
WTTVWNNNN
NNNNWBAAW		 PBM
Badis et al.(2009)
Sox21_3417 		0.565 0.638
SOX21
M03497_2.00 		Homo sapiens
AACAATKKYAKTGTT
AACAMTRMMATTGTT		 SELEX
Jolma et al.(2013)
SOX21_1 		0.565 0.638
SOX21
M03498_2.00 		Homo sapiens
AACAATRKDYAKTGTT
AACAMTRHMYATTGTT		 SELEX
Jolma et al.(2013)
SOX21_2 		0.565 0.638
SOX21
M03499_2.00 		Homo sapiens
TCAATGDYAKTGA
TCAMTRHCATTGA		 SELEX
Jolma et al.(2013)
SOX21_3 		0.565 0.638
SOX21
M03500_2.00 		Homo sapiens
TGAATGKYAKTCA
TGAMTRMCATTCA		 SELEX
Jolma et al.(2013)
SOX21_4 		0.565 0.638
SOX2
M03519_2.00 		Homo sapiens
DAACAATGKYAKTGTTN
NAACAMTRMCATTGTTH		 SELEX
Jolma et al.(2013)
SOX2_1 		0.565 0.623
SOX2
M03520_2.00 		Homo sapiens
VTGAATGDYATTCAN
NTGAATRHCATTCAB		 SELEX
Jolma et al.(2013)
SOX2_2 		0.565 0.623
SOX2
M03521_2.00 		Homo sapiens
NATCAATGNYATTGAWD
HWTCAATRNCATTGATN		 SELEX
Jolma et al.(2013)
SOX2_3 		0.565 0.623
SOX2
M03522_2.00 		Homo sapiens
NAACAATANCATTGTTH
DAACAATGNTATTGTTN		 SELEX
Jolma et al.(2013)
SOX2_4 		0.565 0.623
SOX2
M03523_2.00 		Homo sapiens
HATCAATANCATTGATH
DATCAATGNTATTGATD		 SELEX
Jolma et al.(2013)
SOX2_5 		0.565 0.623
SOX2
M03524_2.00 		Homo sapiens
DTGAATWNCATTCAH
DTGAATGNWATTCAH		 SELEX
Jolma et al.(2013)
SOX2_6 		0.565 0.623
SoxN
M03976_2.00 		Drosophila melanogaster
VYGHACARTNN
NNAYTGTDCRB		 SELEX
Nitta et al.(2015)
SoxN_1 		0.565 0.623
SoxN
M03977_2.00 		Drosophila melanogaster
NCAATNVCATTGN
NCAATGBNATTGN		 SELEX
Nitta et al.(2015)
SoxN_2 		0.565 0.623
SOX2
M05897_2.00 		Homo sapiens
NACAAWRRNN
NNYYWTTGTN		 SMiLE-seq
Isakova et al.(2017)
SOX2 		0.565 0.623
Sox2
M08170_2.00 		Mus musculus
CCWTTGTB
VACAAWGG		 ChIP-seq
Mathelier et al.(2014)
MA0143.3 		0.565 0.623
Sox2
M08041_2.00 		Mus musculus
WHWRMADNACAAWRR
YYWTTGTNHTKYWDW		 ChIP-seq
Chen et al.(2011)
SRP000217_Sox2 		0.565 0.623
Sox2
M08042_2.00 		Mus musculus
TTWRCATNWSAAWRV
BYWTTSWNATGYWAA		 ChIP-seq
Chen et al.(2011)
SRP000712_Sox2 		0.565 0.623
SOX2
M09397_2.00 		Homo sapiens
BBYYWTTGTBYBB
VVRVACAAWRRVV		 Misc
Kulakovskiy et al.(2013)
SOX2_HUMAN.H11MO.0.A 		0.565 0.623
Sox2
M09409_2.00 		Mus musculus
THWRCATNACAAWRRV
BYYWTTGTNATGYWDA		 Misc
Kulakovskiy et al.(2013)
SOX2_MOUSE.H11MO.0.A 		0.565 0.623
SOX2
M11327_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX2_Q3_01 		0.565 0.623
SOX2
M11328_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX2_Q3 		0.565 0.623
SOX2
M11329_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX2_Q4 		0.565 0.623
SOX2
M11330_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX2_Q6 		0.565 0.623
Sox1
M00214_2.00 		Mus musculus
NNNNNWBAAW
WTTVWNNNNN		 PBM
Badis et al.(2009)
Sox1_2631 		0.565 0.594
Sox1
M03542_2.00 		Mus musculus
VACAATWNCATTGTT
AACAATGNWATTGTB		 SELEX
Jolma et al.(2013)
Sox1_1 		0.565 0.594
Sox1
M03543_2.00 		Mus musculus
NTGAATWNCATTCAN
NTGAATGNWATTCAN		 SELEX
Jolma et al.(2013)
Sox1_2 		0.565 0.594
Sox1
M03544_2.00 		Mus musculus
TCAATWNCATTGA
TCAATGNWATTGA		 SELEX
Jolma et al.(2013)
Sox1_3 		0.565 0.594
Sox1
M03545_2.00 		Mus musculus
TGAATDDNHATTCA
TGAATDNHHATTCA		 SELEX
Jolma et al.(2013)
Sox1_4 		0.565 0.594
Sox17
M00199_2.00 		Mus musculus
NNNNWSAAT
ATTSWNNNN		 PBM
Badis et al.(2009)
Sox17_2837 		0.565 0.609
Sox17
M03533_2.00 		Mus musculus
AACAATWDCATTGTT
AACAATGHWATTGTT		 SELEX
Jolma et al.(2013)
Sox17_1 		0.565 0.609
Sox17
M03534_2.00 		Mus musculus
ATGAATWNCATTCAT
ATGAATGNWATTCAT		 SELEX
Jolma et al.(2013)
Sox17_2 		0.565 0.609
SOX17
M05896_2.00 		Homo sapiens
DRACAATRVN
NBYATTGTYH		 SMiLE-seq
Isakova et al.(2017)
SOX17 		0.565 0.609
Sox17
M02718_2.00 		Mus musculus
SACAATRNN
NNYATTGTS		 SELEX
Mathelier et al.(2014)
MA0078.1 		0.565 0.609
Sox17
M08040_2.00 		Mus musculus
RVACAAWRRVN
NBYYWTTGTBY		 ChIP-seq
Chen et al.(2011)
GSE19026_Sox17_XENcells 		0.565 0.609
SOX17
M09396_2.00 		Homo sapiens
BCCATTKTNBN
NVNAMAATGGV		 Misc
Kulakovskiy et al.(2013)
SOX17_HUMAN.H11MO.0.C 		0.565 0.609
SOX17
M11323_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX17_01 		0.565 0.609
SOX17
M11324_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX17_Q2 		0.565 0.609
Sox18
M00204_2.00 		Mus musculus
NNNWBAAT
ATTVWNNN		 PBM
Badis et al.(2009)
Sox18_3506 		0.565 0.580
SOX18
M03529_2.00 		Homo sapiens
AACAATDNCATTGTT
AACAATGNHATTGTT		 SELEX
Jolma et al.(2013)
SOX18_1 		0.565 0.580
SOX18
M03530_2.00 		Homo sapiens
ATCAATWDCATTGAT
ATCAATGHWATTGAT		 SELEX
Jolma et al.(2013)
SOX18_2 		0.565 0.580
SOX18
M03531_2.00 		Homo sapiens
ATGAATWYCATTCAT
ATGAATGRWATTCAT		 SELEX
Jolma et al.(2013)
SOX18_3 		0.565 0.580
SOX18
M05791_2.00 		Homo sapiens
VACRAYGV
BCRTYGTB		 SELEX
Yin et al.(2017)
SOX18_eDBD_HT-SELEX 		0.565 0.580
SOX18
M11334_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX18_Q5_01 		0.565 0.580
SOX18
M11335_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX18_Q5 		0.565 0.580
SOX18
M05792_2.00 		Homo sapiens
BYATTGTN
NACAATRV		 SELEX
Yin et al.(2017)
SOX18_eDBD_Methyl-HT-SELEX 		0.565 0.580
ROX1
M00070_2.00 		Saccharomyces cerevisiae
NRAACAATWNN
NNWATTGTTYN		 PBM
Badis et al.(2008)
ROX1_2099 		0.556 0.420
ROX1
M07498_2.00 		Saccharomyces cerevisiae
YYHATTGTTYTS
SARAACAATDRR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0371.1 		0.556 0.420
ROX1
M08607_2.00 		Saccharomyces cerevisiae
BYATTGTN
NACAATRV		 Misc
DeBoer et al.(2011)
YPR065W_1396 		0.556 0.420
ROX1
M11346_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ROX1_Q6_01 		0.556 0.420
ROX1
M11347_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ROX1_Q6 		0.556 0.420
egl-13
M00710_2.00 		Caenorhabditis elegans
NNAACAATWN
NWATTGTTNN		 PBM
Narasimhan et al.(2015)
pTH9125 		0.543 0.580
Sox102F
M03981_2.00 		Drosophila melanogaster
ATTGTTCGGTGKN
NMCACCGAACAAT		 SELEX
Nitta et al.(2015)
Sox102F_1 		0.543 0.551
Sox102F
M03982_2.00 		Drosophila melanogaster
NAACAATDDCATTGTTN
NAACAATGHHATTGTTN		 SELEX
Nitta et al.(2015)
Sox102F_2 		0.543 0.551
SRY
M03525_2.00 		Homo sapiens
AACAATANCATTGTT
AACAATGNTATTGTT		 SELEX
Jolma et al.(2013)
SRY_1 		0.541 0.522
SRY
M03526_2.00 		Homo sapiens
AACAATHHNCATTGTT
AACAATGNDDATTGTT		 SELEX
Jolma et al.(2013)
SRY_2 		0.541 0.522
SRY
M03527_2.00 		Homo sapiens
TCAATAMCATTGA
TCAATGKTATTGA		 SELEX
Jolma et al.(2013)
SRY_3 		0.541 0.522
SRY
M03528_2.00 		Homo sapiens
TGAATANCATTCA
TGAATGNTATTCA		 SELEX
Jolma et al.(2013)
SRY_4 		0.541 0.522
SRY
M05898_2.00 		Homo sapiens
NACAATNV
BNATTGTN		 SMiLE-seq
Isakova et al.(2017)
SRY 		0.541 0.522
SRY
M02717_2.00 		Homo sapiens
NDWAACAAW
WTTGTWWHN		 SELEX
Mathelier et al.(2014)
MA0084.1 		0.541 0.522
SRY
M09398_2.00 		Homo sapiens
BWTTGTTWH
DWAACAAWV		 Misc
Kulakovskiy et al.(2013)
SRY_HUMAN.H11MO.0.B 		0.541 0.522
SRY
M11331_2.00 		Homo sapiens
AAWSWMM
KKWSWTT		 Transfac
Matys et al.(2006)
V$SRY_01 		0.541 0.522
SRY
M11332_2.00 		Homo sapiens
HBHWTTGTTWDN
NHWAACAAWDVD		 Transfac
Matys et al.(2006)
V$SRY_02 		0.541 0.522
SRY
M11333_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRY_Q6 		0.541 0.522
Sry
M00211_2.00 		Mus musculus
ATTRTNNNNN
NNNNNAYAAT		 PBM
Badis et al.(2009)
Sry_2833 		0.539 0.580
Sry
M09408_2.00 		Mus musculus
BWTTGTTWH
DWAACAAWV		 Misc
Kulakovskiy et al.(2013)
SRY_MOUSE.H11MO.0.B 		0.539 0.580
Sox15
M03973_2.00 		Drosophila melanogaster
WYTGTTCGGTD
HACCGAACARW		 SELEX
Nitta et al.(2015)
Sox15_1 		0.520 0.551
Sox15
M03974_2.00 		Drosophila melanogaster
VACAATDNCATTGTN
NACAATGNHATTGTB		 SELEX
Nitta et al.(2015)
Sox15_2 		0.520 0.551
Sox15
M06450_2.00 		Drosophila melanogaster
RWACAATR
YATTGTWY		 B1H
Zhu et al.(2011)
Sox15_SANGER_5_FBgn0005613 		0.520 0.551
Sox30
M00201_2.00 		Mus musculus
ATTRTBNNNN
NNNNVAYAAT		 PBM
Badis et al.(2009)
Sox30_2781 		0.498 0.406
SOX30
M05753_2.00 		Homo sapiens
NRACAATN
NATTGTYN		 SELEX
Yin et al.(2017)
SOX30_eDBD_HT-SELEX 		0.498 0.406
SOX30
M05754_2.00 		Homo sapiens
BATTGTYN
NRACAATV		 SELEX
Yin et al.(2017)
SOX30_eDBD_Methyl-HT-SELEX 		0.498 0.406
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG000354.1 Sox 42 110

Links

Other Sox family TFs
Other Alligator sinensis TFs

2130 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29596.m000699 Ricinus communis 29596.m000699 I
29804.m001536 Ricinus communis 29804.m001536 I
AMTR_s00001p00267050 Amborella trichopoda AMTR_s00001p00267050 I
AMTR_s00046p00208680 Amborella trichopoda AMTR_s00046p00208680 I
AMTR_s00053p00228660 Amborella trichopoda AMTR_s00053p00228660 I
AMTR_s00109p00015260 Amborella trichopoda AMTR_s00109p00015260 I
Aquca_010_00060 Aquilegia coerulea Aquca_010_00060 I
Aquca_013_00471 Aquilegia coerulea Aquca_013_00471 I
Aquca_014_00077 Aquilegia coerulea Aquca_014_00077 I
ANR1 Arabidopsis thaliana AT2G14210 I
AGL17 Arabidopsis thaliana AT2G22630 I
SOC1 Arabidopsis thaliana AT2G45660 D
AGL16 Arabidopsis thaliana AT3G57230 D
AGL18 Arabidopsis thaliana AT3G57390 I
AGL14 Arabidopsis thaliana AT4G11880 I
AGL21 Arabidopsis thaliana AT4G37940 I
BGIOSGA000377 Oryza indica BGIOSGA000377 I
BGIOSGA007056 Oryza indica BGIOSGA007056 I
BGIOSGA008494 Oryza indica BGIOSGA008494 I
BGIOSGA008983 Oryza indica BGIOSGA008983 I
BGIOSGA016105 Oryza indica BGIOSGA016105 I
BGIOSGA016106 Oryza indica BGIOSGA016106 I
BGIOSGA019900 Oryza indica BGIOSGA019900 I
BGIOSGA022872 Oryza indica BGIOSGA022872 I
BGIOSGA026939 Oryza indica BGIOSGA026939 I
Bo1g003270 Brassica oleracea Bo1g003270 I
Bo1g007520 Brassica oleracea Bo1g007520 I
Bo3g038880 Brassica oleracea Bo3g038880 I
Bo3g153080 Brassica oleracea Bo3g153080 I
Bo3g165710 Brassica oleracea Bo3g165710 I
Bo4g149900 Brassica oleracea Bo4g149900 I
Bo4g195720 Brassica oleracea Bo4g195720 I
Bo6g072840 Brassica oleracea Bo6g072840 I
Bo7g025330 Brassica oleracea Bo7g025330 I
Bo7g108370 Brassica oleracea Bo7g108370 I
Bo7g116760 Brassica oleracea Bo7g116760 I
Bo8g091790 Brassica oleracea Bo8g091790 I
Bo8g100930 Brassica oleracea Bo8g100930 I
Bo9g093920 Brassica oleracea Bo9g093920 I
Bostr.13083s0004 Boechera stricta Bostr.13083s0004 I
Bostr.19427s0033 Boechera stricta Bostr.19427s0033 I
Bostr.20505s0007 Boechera stricta Bostr.20505s0007 I
Bostr.20505s0022 Boechera stricta Bostr.20505s0022 I
Bostr.25542s0226 Boechera stricta Bostr.25542s0226 I
Bra000393 Brassica rapa Bra000393 I
Bra003278 Brassica rapa Bra003278 I
Bra007324 Brassica rapa Bra007324 I
Bra010623 Brassica rapa Bra010623 I
Bra011509 Brassica rapa Bra011509 I
Bra011797 Brassica rapa Bra011797 I
Bra014628 Brassica rapa Bra014628 I
Bra017638 Brassica rapa Bra017638 I
Bra019343 Brassica rapa Bra019343 I
Bra020826 Brassica rapa Bra020826 I
Bra029424 Brassica rapa Bra029424 I
Bra030222 Brassica rapa Bra030222 I
Bra039324 Brassica rapa Bra039324 I
Bra039921 Brassica rapa Bra039921 I
BRADI2G57000 Brachypodium distachyon BRADI2G57000 I
BRADI3G46920 Brachypodium distachyon BRADI3G46920 I
BRADI3G57017 Brachypodium distachyon BRADI3G57017 I
BRADI5G12440 Brachypodium distachyon BRADI5G12440 I
Cagra.0578s0054 Capsella grandiflora Cagra.0578s0054 I
Cagra.0578s0070 Capsella grandiflora Cagra.0578s0070 I
Cagra.1080s0003 Capsella grandiflora Cagra.1080s0003 I
Cagra.3821s0004 Capsella grandiflora Cagra.3821s0004 I
Cagra.5414s0059 Capsella grandiflora Cagra.5414s0059 I
Carubv10006453m.g Capsella rubella Carubv10006453m.g I
Carubv10015972m.g Capsella rubella Carubv10015972m.g I
Carubv10017886m.g Capsella rubella Carubv10017886m.g I
Carubv10017951m.g Capsella rubella Carubv10017951m.g I
Carubv10023996m.g Capsella rubella Carubv10023996m.g I
cassava19528.m1 Manihot esculenta cassava19528.m1 I
cassava19939.m1 Manihot esculenta cassava19939.m1 I
cassava21958.m1 Manihot esculenta cassava21958.m1 I
cassava26340.m1 Manihot esculenta cassava26340.m1 I
cassava28648.m1 Manihot esculenta cassava28648.m1 I
cassava30125.valid.m1 Manihot esculenta cassava30125.valid.m1 I
cassava3099.m1 Manihot esculenta cassava3099.m1 I
cassava33801.m1 Manihot esculenta cassava33801.m1 I
cassava39185.m1 Manihot esculenta cassava39185.m1 I
cassava44571.m1 Manihot esculenta cassava44571.m1 I
cassava45813.m1 Manihot esculenta cassava45813.m1 I
cassava4651.m1 Manihot esculenta cassava4651.m1 I
cassava723.valid.m1 Manihot esculenta cassava723.valid.m1 I
Ca_14956 Cicer arietinum Ca_14956 I
Ca_19854 Cicer arietinum Ca_19854 I
Ca_24925 Cicer arietinum Ca_24925 I
chr4.CM0126.630.nc Lotus japonicus chr4.CM0126.630.nc I
chr6.CM0055.180.nc Lotus japonicus chr6.CM0055.180.nc I
Ciclev10005698m.g Citrus clementina Ciclev10005698m.g I
Ciclev10032519m.g Citrus clementina Ciclev10032519m.g I
Cla002388 Citrullus lanatus Cla002388 I
Cla006326 Citrullus lanatus Cla006326 I
Cla011687 Citrullus lanatus Cla011687 I
Cla014307 Citrullus lanatus Cla014307 I
Cla017565 Citrullus lanatus Cla017565 I
Cla023427 Citrullus lanatus Cla023427 I
Cucsa.103820 Cucumis sativus Cucsa.103820 I
Cucsa.115490 Cucumis sativus Cucsa.115490 I
Cucsa.248870 Cucumis sativus Cucsa.248870 I
Cucsa.331900 Cucumis sativus Cucsa.331900 I
Eucgr.E00516 Eucalyptus grandis Eucgr.E00516 I
Eucgr.F02161 Eucalyptus grandis Eucgr.F02161 I
Eucgr.G03284 Eucalyptus grandis Eucgr.G03284 I
Eucgr.I02598 Eucalyptus grandis Eucgr.I02598 I
Eucgr.I02600 Eucalyptus grandis Eucgr.I02600 I
evm.TU.supercontig_125.55 Carica papaya evm.TU.supercontig_125.55 I
evm.TU.supercontig_177.14 Carica papaya evm.TU.supercontig_177.14 I
e_gw1.171.4.1 Physcomitrella patens e_gw1.171.4.1 I
e_gw1.209.37.1 Physcomitrella patens e_gw1.209.37.1 I
F775_13452 Aegilops tauschii F775_13452 I
F775_15097 Aegilops tauschii F775_15097 I
F775_25533 Aegilops tauschii F775_25533 I
F775_27066 Aegilops tauschii F775_27066 I
F775_29079 Aegilops tauschii F775_29079 I
AGL17 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4000157 I
AGL16 Arabidopsis lyrata fgenesh2_kg.5__2158__AT3G57230.1 I
AGL14 Arabidopsis lyrata fgenesh2_kg.6__3138__AT4G11880.1 I
AGL21 Arabidopsis lyrata fgenesh2_kg.7__253__AT4G37940.1 I
gene19425-v1.0-hybrid Fragaria vesca gene19425-v1.0-hybrid I
gene22696-v1.0-hybrid Fragaria vesca gene22696-v1.0-hybrid I
gene25618-v1.0-hybrid Fragaria vesca gene25618-v1.0-hybrid I
gene26429-v1.0-hybrid Fragaria vesca gene26429-v1.0-hybrid I
GLYMA01G02525 Glycine max GLYMA01G02525 I
GLYMA02G33040 Glycine max GLYMA02G33040 I
GLYMA02G38091 Glycine max GLYMA02G38091 I
GLYMA03G02191 Glycine max GLYMA03G02191 I
GLYMA07G08831 Glycine max GLYMA07G08831 I
GLYMA08G06991 Glycine max GLYMA08G06991 I
GLYMA08G07001 Glycine max GLYMA08G07001 I
GLYMA09G33451 Glycine max GLYMA09G33451 I
GLYMA09G40230 Glycine max GLYMA09G40230 I
GLYMA11G16105 Glycine max GLYMA11G16105 I
GLYMA13G32810 Glycine max GLYMA13G32810 I
GLYMA14G36221 Glycine max GLYMA14G36221 I
GLYMA15G06470 Glycine max GLYMA15G06470 I
GLYMA18G45780 Glycine max GLYMA18G45780 I
Gorai.003G090800 Gossypium raimondii Gorai.003G090800 I
Gorai.004G169000 Gossypium raimondii Gorai.004G169000 I
Gorai.007G009800 Gossypium raimondii Gorai.007G009800 I
Gorai.007G058200 Gossypium raimondii Gorai.007G058200 I
Gorai.007G360800 Gossypium raimondii Gorai.007G360800 I
Gorai.008G018100 Gossypium raimondii Gorai.008G018100 I
Gorai.008G112400 Gossypium raimondii Gorai.008G112400 I
Gorai.009G227500 Gossypium raimondii Gorai.009G227500 I
Gorai.010G032700 Gossypium raimondii Gorai.010G032700 I
Gorai.013G053800 Gossypium raimondii Gorai.013G053800 I
Gorai.013G054000 Gossypium raimondii Gorai.013G054000 I
GRMZM2G032905 Zea mays GRMZM2G032905 I
GRMZM2G044408 Zea mays GRMZM2G044408 I
GRMZM2G052045 Zea mays GRMZM2G052045 I
GRMZM2G055782 Zea mays GRMZM2G055782 I
GRMZM2G070034 Zea mays GRMZM2G070034 I
GRMZM2G110153 Zea mays GRMZM2G110153 I
GRMZM2G130382 Zea mays GRMZM2G130382 I
GRMZM2G152862 Zea mays GRMZM2G152862 I
GRMZM2G316366 Zea mays GRMZM2G316366 I
GRMZM5G805387 Zea mays GRMZM5G805387 I
GSMUA_Achr10G30040_001 Musa acuminata GSMUA_Achr10G30040_001 I
GSMUA_Achr11G02790_001 Musa acuminata GSMUA_Achr11G02790_001 I
GSMUA_Achr11G07760_001 Musa acuminata GSMUA_Achr11G07760_001 I
GSMUA_Achr1G03630_001 Musa acuminata GSMUA_Achr1G03630_001 I
GSMUA_Achr1G24070_001 Musa acuminata GSMUA_Achr1G24070_001 I
GSMUA_Achr3G07310_001 Musa acuminata GSMUA_Achr3G07310_001 I
GSMUA_Achr3G20280_001 Musa acuminata GSMUA_Achr3G20280_001 I
GSMUA_Achr3G23580_001 Musa acuminata GSMUA_Achr3G23580_001 I
GSMUA_Achr5G20280_001 Musa acuminata GSMUA_Achr5G20280_001 I
GSMUA_Achr5G24560_001 Musa acuminata GSMUA_Achr5G24560_001 I
GSMUA_Achr7G12610_001 Musa acuminata GSMUA_Achr7G12610_001 I
GSMUA_Achr8G12280_001 Musa acuminata GSMUA_Achr8G12280_001 I
GSMUA_Achr9G15540_001 Musa acuminata GSMUA_Achr9G15540_001 I
LjSGA_019451.1 Lotus japonicus LjSGA_019451.1 I
LjSGA_021013.1 Lotus japonicus LjSGA_021013.1 I
LPERR01G34040 Leersia perrieri LPERR01G34040 I
LPERR02G04610 Leersia perrieri LPERR02G04610 I
LPERR02G17700 Leersia perrieri LPERR02G17700 I
LPERR02G25570 Leersia perrieri LPERR02G25570 I
LPERR03G01640 Leersia perrieri LPERR03G01640 I
LPERR04G04720 Leersia perrieri LPERR04G04720 I
LPERR04G11770 Leersia perrieri LPERR04G11770 I
LPERR08G12860 Leersia perrieri LPERR08G12860 I
Lus10005325.g Linum usitatissimum Lus10005325.g I
Lus10028214.g Linum usitatissimum Lus10028214.g I
Lus10029556.g Linum usitatissimum Lus10029556.g I
Lus10039580.g Linum usitatissimum Lus10039580.g I
Lus10042918.g Linum usitatissimum Lus10042918.g I
M17_MAIZE Zea mays M17_MAIZE D
MDP0000135652 Malus domestica MDP0000135652 I
MDP0000136650 Malus domestica MDP0000136650 I
MDP0000144516 Malus domestica MDP0000144516 I
MDP0000156783 Malus domestica MDP0000156783 I
MDP0000228942 Malus domestica MDP0000228942 I
MDP0000234911 Malus domestica MDP0000234911 I
MDP0000254052 Malus domestica MDP0000254052 I
MDP0000285581 Malus domestica MDP0000285581 I
MDP0000314765 Malus domestica MDP0000314765 I
MDP0000475549 Malus domestica MDP0000475549 I
MDP0000783966 Malus domestica MDP0000783966 I
mgb000125m Mimulus guttatus mgb000125m I
mgf007519m Mimulus guttatus mgf007519m I
mgf019667m Mimulus guttatus mgf019667m I
mgf021543m Mimulus guttatus mgf021543m I
MLOC_4407 Hordeum vulgare MLOC_4407 I
MLOC_44514 Hordeum vulgare MLOC_44514 I
MTR_0003s0590 Medicago truncatula MTR_0003s0590 I
MTR_2g009890 Medicago truncatula MTR_2g009890 I
MTR_4g093030 Medicago truncatula MTR_4g093030 I
MTR_5g031000 Medicago truncatula MTR_5g031000 I
MTR_5g066960 Medicago truncatula MTR_5g066960 I
MTR_7g075870 Medicago truncatula MTR_7g075870 I
OB01G48280 Oryza brachyantha OB01G48280 I
OB01G48510 Oryza brachyantha OB01G48510 I
OB02G14670 Oryza brachyantha OB02G14670 I
OB02G29310 Oryza brachyantha OB02G29310 I
OB02G38310 Oryza brachyantha OB02G38310 I
OB04G15510 Oryza brachyantha OB04G15510 I
OB04G22330 Oryza brachyantha OB04G22330 I
OB06G22200 Oryza brachyantha OB06G22200 I
OB06G31860 Oryza brachyantha OB06G31860 I
OB08G23110 Oryza brachyantha OB08G23110 I
OB11G21480 Oryza brachyantha OB11G21480 I
OBART01G39540 Oryza barthii OBART01G39540 I
OBART02G05380 Oryza barthii OBART02G05380 I
OBART02G21870 Oryza barthii OBART02G21870 I
OBART02G31280 Oryza barthii OBART02G31280 I
OBART04G07050 Oryza barthii OBART04G07050 I
OBART04G15020 Oryza barthii OBART04G15020 I
OBART05G17040 Oryza barthii OBART05G17040 I
OBART06G14060 Oryza barthii OBART06G14060 I
OBART08G15610 Oryza barthii OBART08G15610 I
OGLUM01G43760 Oryza glumaepatula OGLUM01G43760 I
OGLUM02G05240 Oryza glumaepatula OGLUM02G05240 I
OGLUM02G22050 Oryza glumaepatula OGLUM02G22050 I
OGLUM02G31980 Oryza glumaepatula OGLUM02G31980 I
OGLUM04G06810 Oryza glumaepatula OGLUM04G06810 I
OGLUM04G14880 Oryza glumaepatula OGLUM04G14880 I
OGLUM06G15040 Oryza glumaepatula OGLUM06G15040 I
OGLUM08G16360 Oryza glumaepatula OGLUM08G16360 I
OLONG_003010 Oryza longistaminata OLONG_003010 I
OLONG_004860 Oryza longistaminata OLONG_004860 I
OLONG_005253 Oryza longistaminata OLONG_005253 I
OLONG_009563 Oryza longistaminata OLONG_009563 I
OLONG_011763 Oryza longistaminata OLONG_011763 I
OLONG_016283 Oryza longistaminata OLONG_016283 I
OLONG_018231 Oryza longistaminata OLONG_018231 I
OLONG_024179 Oryza longistaminata OLONG_024179 I
OMERI01G36400 Oryza meridionalis OMERI01G36400 I
OMERI02G06250 Oryza meridionalis OMERI02G06250 I
OMERI02G21410 Oryza meridionalis OMERI02G21410 I
OMERI02G30060 Oryza meridionalis OMERI02G30060 I
OMERI05G14780 Oryza meridionalis OMERI05G14780 I
OMERI06G15180 Oryza meridionalis OMERI06G15180 I
OMERI08G12880 Oryza meridionalis OMERI08G12880 I
ONIVA01G44390 Oryza nivara ONIVA01G44390 I
ONIVA02G05710 Oryza nivara ONIVA02G05710 I
ONIVA02G24100 Oryza nivara ONIVA02G24100 I
ONIVA02G34790 Oryza nivara ONIVA02G34790 I
ONIVA04G05310 Oryza nivara ONIVA04G05310 I
ONIVA04G13150 Oryza nivara ONIVA04G13150 I
ONIVA05G17790 Oryza nivara ONIVA05G17790 I
ONIVA06G16870 Oryza nivara ONIVA06G16870 I
ONIVA08G16700 Oryza nivara ONIVA08G16700 I
OPUNC01G38250 Oryza punctata OPUNC01G38250 I
OPUNC02G04560 Oryza punctata OPUNC02G04560 I
OPUNC02G19600 Oryza punctata OPUNC02G19600 I
OPUNC02G29000 Oryza punctata OPUNC02G29000 I
OPUNC04G05760 Oryza punctata OPUNC04G05760 I
OPUNC04G12890 Oryza punctata OPUNC04G12890 I
OPUNC06G13170 Oryza punctata OPUNC06G13170 I
OPUNC08G13690 Oryza punctata OPUNC08G13690 I
orange1.1g025240m.g Citrus sinensis orange1.1g025240m.g I
orange1.1g037016m.g Citrus sinensis orange1.1g037016m.g I
orange1.1g039982m.g Citrus sinensis orange1.1g039982m.g I
ORGLA01G0334300 Oryza glaberrima ORGLA01G0334300 I
ORGLA02G0049700 Oryza glaberrima ORGLA02G0049700 I
ORGLA02G0267800 Oryza glaberrima ORGLA02G0267800 I
ORGLA04G0053100 Oryza glaberrima ORGLA04G0053100 I
ORGLA04G0120000 Oryza glaberrima ORGLA04G0120000 I
ORGLA05G0147400 Oryza glaberrima ORGLA05G0147400 I
ORGLA06G0125600 Oryza glaberrima ORGLA06G0125600 I
ORGLA08G0137000 Oryza glaberrima ORGLA08G0137000 I
ORUFI02G05500 Oryza rufipogon ORUFI02G05500 I
ORUFI02G22950 Oryza rufipogon ORUFI02G22950 I
ORUFI02G32980 Oryza rufipogon ORUFI02G32980 I
ORUFI04G08040 Oryza rufipogon ORUFI04G08040 I
ORUFI04G16410 Oryza rufipogon ORUFI04G16410 I
ORUFI05G05970 Oryza rufipogon ORUFI05G05970 I
ORUFI05G18270 Oryza rufipogon ORUFI05G18270 I
ORUFI06G14980 Oryza rufipogon ORUFI06G14980 I
MADS2 Oryza sativa OS01G0883100 D
MADS29 Oryza sativa OS02G0170300 I
MADS27 Oryza sativa OS02G0579600 I
MADS57 Oryza sativa OS02G0731200 I
MADS25 Oryza sativa OS04G0304400 I
OS04G0461300 Oryza sativa OS04G0461300 I
MADS4 Oryza sativa OS05G0423400 I
OS06G0347700 Oryza sativa OS06G0347700 I
MADS23 Oryza sativa OS08G0431900 I
Pavir.Aa00445 Panicum virgatum Pavir.Aa00445 I
Pavir.Aa01540 Panicum virgatum Pavir.Aa01540 I
Pavir.Aa03173 Panicum virgatum Pavir.Aa03173 I
Pavir.Ab00475 Panicum virgatum Pavir.Ab00475 I
Pavir.Ab02921 Panicum virgatum Pavir.Ab02921 I
Pavir.Ea01057 Panicum virgatum Pavir.Ea01057 I
Pavir.Ea03625 Panicum virgatum Pavir.Ea03625 I
Pavir.Fb01587 Panicum virgatum Pavir.Fb01587 I
Pavir.Ga01454 Panicum virgatum Pavir.Ga01454 I
Pavir.Gb01527 Panicum virgatum Pavir.Gb01527 I
Pavir.J00016 Panicum virgatum Pavir.J00016 I
Pavir.J19259 Panicum virgatum Pavir.J19259 I
Pavir.J33965 Panicum virgatum Pavir.J33965 I
PGSC0003DMG400000008 Solanum tuberosum PGSC0003DMG400000008 I
PGSC0003DMG400009349 Solanum tuberosum PGSC0003DMG400009349 I
PGSC0003DMG400022748 Solanum tuberosum PGSC0003DMG400022748 I
PK08595.1 Cannabis sativa PK08595.1 I
PK27158.1 Cannabis sativa PK27158.1 I
PK27820.1 Cannabis sativa PK27820.1 I
Pm002271 Prunus mume Pm002271 I
Pm004349 Prunus mume Pm004349 I
Pm016579 Prunus mume Pm016579 I
Pm018089 Prunus mume Pm018089 I
Pm021962 Prunus mume Pm021962 I
POPTR_0001s29100 Populus trichocarpa POPTR_0001s29100 I
POPTR_0002s11040 Populus trichocarpa POPTR_0002s11040 I
POPTR_0002s15310 Populus trichocarpa POPTR_0002s15310 I
POPTR_0005s19440 Populus trichocarpa POPTR_0005s19440 I
POPTR_0006s04730 Populus trichocarpa POPTR_0006s04730 I
AGL15 Populus trichocarpa POPTR_0009s06060 I
POPTR_0013s10190 Populus trichocarpa POPTR_0013s10190 I
PRUPE_ppa014428mg Prunus persica PRUPE_ppa014428mg I
PRUPE_ppa021434mg Prunus persica PRUPE_ppa021434mg I
PRUPE_ppa024736mg Prunus persica PRUPE_ppa024736mg I
Q40591_TOBAC Nicotiana tabacum Q40591_TOBAC D
Q9AR49_MAIZE Zea mays Q9AR49_MAIZE D
Q9ATE3_PETHY Petunia x hybrida Q9ATE3_PETHY D
Q9ATE8_PETHY Petunia x hybrida Q9ATE8_PETHY D
Q9FVN1_MAIZE Zea mays Q9FVN1_MAIZE D
SapurV1A.0004s0740 Salix purpurea SapurV1A.0004s0740 I
SapurV1A.0019s1110 Salix purpurea SapurV1A.0019s1110 I
SapurV1A.0228s0130 Salix purpurea SapurV1A.0228s0130 I
SapurV1A.1370s0060 Salix purpurea SapurV1A.1370s0060 I
SapurV1A.2345s0030 Salix purpurea SapurV1A.2345s0030 I
Sb01g030570 Sorghum bicolor Sb01g030570 I
Sb03g041860 Sorghum bicolor Sb03g041860 I
Sb04g004736 Sorghum bicolor Sb04g004736 I
Sb04g024010 Sorghum bicolor Sb04g024010 I
Sb04g028960 Sorghum bicolor Sb04g028960 I
Sb06g019040 Sorghum bicolor Sb06g019040 I
Sb07g021110 Sorghum bicolor Sb07g021110 I
AGL20 Arabidopsis lyrata scaffold_403512.1 I
SELMODRAFT_450818 Selaginella moellendorffii SELMODRAFT_450818 I
SELMODRAFT_450937 Selaginella moellendorffii SELMODRAFT_450937 I
Si002929m.g Setaria italica Si002929m.g I
Si003917m.g Setaria italica Si003917m.g I
Si012517m.g Setaria italica Si012517m.g I
Si014885m.g Setaria italica Si014885m.g I
Si018183m.g Setaria italica Si018183m.g I
Si019337m.g Setaria italica Si019337m.g I
Si019880m.g Setaria italica Si019880m.g I
Si023214m.g Setaria italica Si023214m.g I
Si038299m.g Setaria italica Si038299m.g I
Solyc01g106170.2 Solanum lycopersicum Solyc01g106170.2 I
Solyc02g091550.1 Solanum lycopersicum Solyc02g091550.1 I
Solyc04g076680.2 Solanum lycopersicum Solyc04g076680.2 I
Solyc08g080100.2 Solanum lycopersicum Solyc08g080100.2 I
Solyc12g088080.1 Solanum lycopersicum Solyc12g088080.1 I
TCM_000931 Theobroma cacao TCM_000931 I
TCM_005456 Theobroma cacao TCM_005456 I
TCM_005818 Theobroma cacao TCM_005818 I
TCM_007324 Theobroma cacao TCM_007324 I
TCM_014661 Theobroma cacao TCM_014661 I
TCM_016147 Theobroma cacao TCM_016147 I
TCM_024579 Theobroma cacao TCM_024579 I
TCM_034549 Theobroma cacao TCM_034549 I
Thhalv10000598m.g Eutrema salsugineum Thhalv10000598m.g I
Thhalv10022995m.g Eutrema salsugineum Thhalv10022995m.g I
Thhalv10026116m.g Eutrema salsugineum Thhalv10026116m.g I
Thhalv10026139m.g Eutrema salsugineum Thhalv10026139m.g I
Traes_1AL_1B5F51626 Triticum aestivum Traes_1AL_1B5F51626 I
Traes_2AL_267502097 Triticum aestivum Traes_2AL_267502097 I
Traes_2BL_3E613DE21 Triticum aestivum Traes_2BL_3E613DE21 I
Traes_2DL_662837152 Triticum aestivum Traes_2DL_662837152 I
Traes_5AS_029A65B0A Triticum aestivum Traes_5AS_029A65B0A I
Traes_5BS_BC15EF87A Triticum aestivum Traes_5BS_BC15EF87A I
Traes_5DS_3EBE121C7 Triticum aestivum Traes_5DS_3EBE121C7 I
Traes_6AL_B5D4C3A49 Triticum aestivum Traes_6AL_B5D4C3A49 I
Traes_6DL_D1C1DBD34 Triticum aestivum Traes_6DL_D1C1DBD34 I
Traes_7AS_376CD50EA Triticum aestivum Traes_7AS_376CD50EA I
Traes_7AS_8123257BA Triticum aestivum Traes_7AS_8123257BA I
Traes_7BS_DC9822CEF Triticum aestivum Traes_7BS_DC9822CEF I
Traes_7DS_05F0F0B64 Triticum aestivum Traes_7DS_05F0F0B64 I
Traes_7DS_59CBF5647 Triticum aestivum Traes_7DS_59CBF5647 I
Traes_7DS_D9008CC09 Triticum aestivum Traes_7DS_D9008CC09 I
TRIUR3_08704 Triticum urartu TRIUR3_08704 I
TRIUR3_09108 Triticum urartu TRIUR3_09108 I
TRIUR3_09267 Triticum urartu TRIUR3_09267 I
TRIUR3_17292 Triticum urartu TRIUR3_17292 I
TRIUR3_19891 Triticum urartu TRIUR3_19891 I
TRIUR3_25027 Triticum urartu TRIUR3_25027 I
VIT_00s0211g00150 Vitis vinifera VIT_00s0211g00150 I
VIT_00s0211g00180 Vitis vinifera VIT_00s0211g00180 I
VIT_03s0097g00160 Vitis vinifera VIT_03s0097g00160 I
AGL18 Vitis vinifera VIT_08s0007g08790 I
AGL15 Vitis vinifera VIT_13s0158g00100 I
VIT_16s0022g02400 Vitis vinifera VIT_16s0022g02400 I
VIT_17s0000g01230 Vitis vinifera VIT_17s0000g01230 I
ANR1 Vitis vinifera VIT_18s0001g07900 I