SMU15016767 (Schmidtea mediterranea)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 SMU15016767 T335014_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
SMU15016767 Sox 10 80
SMU15016767 Sox 99 165

Links

Other Sox family TFs
Other Schmidtea mediterranea TFs

195 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAC59859 Xenopus laevis AAC59859 N 0.422
AAEL011380 Aedes aegypti AAEL011380 N 0.482
AAH44009 Xenopus laevis AAH44009 N 0.425
AAH73449 Xenopus laevis AAH73449 N 0.422
AAI68534 Xenopus tropicalis AAI68534 N 0.435
AALB006743 Anopheles albimanus AALB006743 N 0.482
AARA010318 Anopheles arabiensis AARA010318 N 0.482
AATE010886 Anopheles atroparvus AATE010886 N 0.471
AATE018776 Anopheles atroparvus AATE018776 N 0.482
ACEP16613 Atta cephalotes ACEP16613 N 0.469
ACUA021022 Anopheles culicifacies ACUA021022 N 0.482
ACYPI007949 Acyrthosiphon pisum ACYPI007949 N 0.463
ADAC001494 Anopheles darlingi ADAC001494 N 0.482
ADIR000367 Anopheles dirus ADIR000367 N 0.440
ADIR011701 Anopheles dirus ADIR011701 N 0.482
AEPI002924 Anopheles epiroticus AEPI002924 N 0.482
AFAF003948 Anopheles farauti AFAF003948 N 0.482
AFUN010134 Anopheles funestus AFUN010134 N 0.482
AGAP000005 Anopheles gambiae AGAP000005 N 0.482
AMAM015540 Anopheles maculatus AMAM015540 N 0.482
AMEC021909 Anopheles melas AMEC021909 N 0.482
AMEM017336 Anopheles merus AMEM017336 N 0.482
AMIN005344 Anopheles minimus AMIN005344 N 0.482
AQUA004962 Anopheles quadriannulatus AQUA004962 N 0.451
ASIS000124 Anopheles sinensis ASIS000124 N 0.482
ASIS009950 Anopheles sinensis ASIS009950 N 0.477
A_00070 Schistosoma haematobium A_00070 N 0.437
A_05510 Schistosoma haematobium A_05510 N 0.424
BAA06440 Xenopus laevis BAA06440 N 0.426
BGIBMGA001132 Bombyx mori BGIBMGA001132 N 0.447
CapteG158220 Capitella teleta CapteG158220 N 0.461
CBG17468 Caenorhabditis briggsae CBG17468 N 0.436
CBN17977 Caenorhabditis brenneri CBN17977 N 0.436
Cflo_05895--XP_001121384.1_APIME Camponotus floridanus Cflo_05895--XP_001121384.1_APIME N 0.469
CJA09678 Caenorhabditis japonica CJA09678 N 0.436
CPIJ014043 Culex quinquefasciatus CPIJ014043 N 0.493
CpipJ_CPIJ014043 Culex pipiens CpipJ_CPIJ014043 N 0.493
CRE02943 Caenorhabditis remanei CRE02943 N 0.421
csin110255 Clonorchis sinensis csin110255 N 0.464
csin112095 Clonorchis sinensis csin112095 N 0.422
D915_00818 Fasciola hepatica D915_00818 N 0.513
D915_15256 Fasciola hepatica D915_15256 N 0.464
DAPPUDRAFT_232871 Daphnia pulex DAPPUDRAFT_232871 N 0.470
DAPPUDRAFT_306496 Daphnia pulex DAPPUDRAFT_306496 N 0.424
DILT_0000548601 Diphyllobothrium latum DILT_0000548601 N 0.420
DILT_0001497901 Diphyllobothrium latum DILT_0001497901 N 0.530
ECANG7_02036 Echinococcus canadensis ECANG7_02036 N 0.541
EmuJ_001049000 Echinococcus multilocularis EmuJ_001049000 N 0.561
ENSAMXG00000014031 Astyanax mexicanus ENSAMXG00000014031 N 0.424
ENSAMXG00000014832 Astyanax mexicanus ENSAMXG00000014832 N 0.427
HMGB1 Bos taurus ENSBTAG00000014862 N 0.419
ENSBTAG00000031711 Bos taurus ENSBTAG00000031711 N 0.434
hmg1/2 Ciona intestinalis ENSCING00000004075 N 0.466
ENSCJAG00000007419 Callithrix jacchus ENSCJAG00000007419 N 0.425
ENSCJAG00000008378 Callithrix jacchus ENSCJAG00000008378 N 0.432
ENSCJAG00000008384 Callithrix jacchus ENSCJAG00000008384 N 0.429
ENSCJAG00000014214 Callithrix jacchus ENSCJAG00000014214 N 0.445
ENSCJAG00000022832 Callithrix jacchus ENSCJAG00000022832 N 0.463
ENSCJAG00000033322 Callithrix jacchus ENSCJAG00000033322 N 0.440
ENSCPOG00000003985 Cavia porcellus ENSCPOG00000003985 N 0.432
ENSCSAG00000013078 Chlorocebus sabaeus ENSCSAG00000013078 N 0.440
ENSCSAVG00000000341 Ciona savignyi ENSCSAVG00000000341 N 0.453
hmgb2a Danio rerio ENSDARG00000029722 N 0.421
hmgb1a Danio rerio ENSDARG00000099175 N 0.426
ENSDNOG00000005537 Dasypus novemcinctus ENSDNOG00000005537 N 0.463
ENSECAG00000005186 Equus caballus ENSECAG00000005186 N 0.432
ENSFCAG00000028961 Felis catus ENSFCAG00000028961 N 0.452
hmgb1b Gasterosteus aculeatus ENSGACG00000011447 N 0.441
ENSGMOG00000010060 Gadus morhua ENSGMOG00000010060 N 0.419
ENSMEUG00000011289 Macropus eugenii ENSMEUG00000011289 N 0.425
HMGB1 Microcebus murinus ENSMICG00000006213 N 0.432
ENSMICG00000016224 Microcebus murinus ENSMICG00000016224 N 0.441
ENSMMUG00000001275 Macaca mulatta ENSMMUG00000001275 N 0.432
HMGB2 Macaca mulatta ENSMMUG00000020008 N 0.461
ENSMODG00000009238 Monodelphis domestica ENSMODG00000009238 N 0.432
ENSMPUG00000018359 Mustela putorius furo ENSMPUG00000018359 N 0.440
ENSOARG00000010383 Ovis aries ENSOARG00000010383 N 0.475
ENSOARG00000011611 Ovis aries ENSOARG00000011611 N 0.457
ENSOARG00000015382 Ovis aries ENSOARG00000015382 N 0.475
ENSOARG00000015955 Ovis aries ENSOARG00000015955 N 0.475
ENSOARG00000017078 Ovis aries ENSOARG00000017078 N 0.432
ENSOCUG00000004133 Oryctolagus cuniculus ENSOCUG00000004133 N 0.461
ENSOCUG00000021132 Oryctolagus cuniculus ENSOCUG00000021132 N 0.475
ENSOCUG00000023449 Oryctolagus cuniculus ENSOCUG00000023449 N 0.444
HMGB3 Oryctolagus cuniculus ENSOCUG00000024959 N 0.440
ENSOCUG00000027747 Oryctolagus cuniculus ENSOCUG00000027747 N 0.429
ENSOGAG00000010941 Otolemur garnettii ENSOGAG00000010941 N 0.415
ENSOGAG00000028411 Otolemur garnettii ENSOGAG00000028411 N 0.432
ENSOGAG00000029272 Otolemur garnettii ENSOGAG00000029272 N 0.417
ENSOGAG00000032152 Otolemur garnettii ENSOGAG00000032152 N 0.422
ENSONIG00000005505 Oreochromis niloticus ENSONIG00000005505 N 0.418
ENSONIG00000019935 Oreochromis niloticus ENSONIG00000019935 N 0.419
hmgb1a Oryzias latipes ENSORLG00000003400 N 0.438
hmgb2b Oryzias latipes ENSORLG00000018687 N 0.419
ENSPANG00000005029 Papio anubis ENSPANG00000005029 N 0.432
ENSPANG00000007527 Papio anubis ENSPANG00000007527 N 0.475
ENSPANG00000010595 Papio anubis ENSPANG00000010595 N 0.424
ENSPANG00000011105 Papio anubis ENSPANG00000011105 N 0.432
ENSPFOG00000004794 Poecilia formosa ENSPFOG00000004794 N 0.419
ENSPFOG00000008464 Poecilia formosa ENSPFOG00000008464 N 0.458
ENSPMAG00000007397 Petromyzon marinus ENSPMAG00000007397 N 0.446
ENSPPYG00000011668 Pongo abelii ENSPPYG00000011668 N 0.432
Hmgb2l1 Rattus norvegicus ENSRNOG00000013167 N 0.468
RGD1561694 Rattus norvegicus ENSRNOG00000029107 N 0.468
AABR07025074.1 Rattus norvegicus ENSRNOG00000032550 N 0.463
Hmgb2 Rattus norvegicus ENSRNOG00000033321 N 0.468
Hmg1l1 Rattus norvegicus ENSRNOG00000034130 N 0.432
LOC688583 Rattus norvegicus ENSRNOG00000050910 N 0.440
Hmg1l1 Rattus norvegicus ENSRNOG00000051482 N 0.432
AC135696.1 Rattus norvegicus ENSRNOG00000058908 N 0.432
HMGB2 Sus scrofa ENSSSCG00000009704 N 0.472
ENSSSCG00000020770 Sus scrofa ENSSSCG00000020770 N 0.440
ENSSSCG00000024283 Sus scrofa ENSSSCG00000024283 N 0.440
ENSSTOG00000000443 Ictidomys tridecemlineatus ENSSTOG00000000443 N 0.432
ENSSTOG00000007009 Ictidomys tridecemlineatus ENSSTOG00000007009 N 0.424
ENSSTOG00000012404 Ictidomys tridecemlineatus ENSSTOG00000012404 N 0.438
ENSTBEG00000009427 Tupaia belangeri ENSTBEG00000009427 N 0.421
hmgb2b Tetraodon nigroviridis ENSTNIG00000004824 N 0.419
hmgb1a Tetraodon nigroviridis ENSTNIG00000009909 N 0.427
hmgb1b Takifugu rubripes ENSTRUG00000004822 N 0.422
hmgb2b Takifugu rubripes ENSTRUG00000005015 N 0.419
hmgb1a Takifugu rubripes ENSTRUG00000008452 N 0.453
ENSXMAG00000011106 Xiphophorus maculatus ENSXMAG00000011106 N 0.419
Dsp1 Drosophila melanogaster FBgn0011764 N 0.486
GA11488 Drosophila pseudoobscura FBgn0071539 N 0.486
GF19115 Drosophila ananassae FBgn0096126 N 0.486
GG17955 Drosophila erecta FBgn0110175 N 0.486
GH12282 Drosophila grimshawi FBgn0119761 N 0.486
GI10980 Drosophila mojavensis FBgn0133743 N 0.486
GD17278 Drosophila simulans FBgn0188840 N 0.486
GJ19445 Drosophila virilis FBgn0206588 N 0.486
GK25058 Drosophila willistoni FBgn0227017 N 0.486
GE17263 Drosophila yakuba FBgn0234741 N 0.486
fgenesh2_pm.scaffold_24000033 Branchiostoma floridae fgenesh2_pm.scaffold_24000033 N 0.500
HDID_0000237901 Hymenolepis diminuta HDID_0000237901 N 0.514
HDID_0000408601 Hymenolepis diminuta HDID_0000408601 N 0.465
HelroG157726 Helobdella robusta HelroG157726 N 0.424
HelroG157878 Helobdella robusta HelroG157878 N 0.444
HelroG87827 Helobdella robusta HelroG87827 N 0.422
HMEL007340 Heliconius melpomene HMEL007340 N 0.467
HmN_000466000 Hymenolepis microstoma HmN_000466000 N 0.514
HmN_000813000 Hymenolepis microstoma HmN_000813000 N 0.449
HNAJ_0000974401 Hymenolepis nana HNAJ_0000974401 N 0.464
HNAJ_0001249801 Hymenolepis nana HNAJ_0001249801 N 0.514
Hsal_13110--XP_001121384.1_APIME Harpegnathos saltator Hsal_13110--XP_001121384.1_APIME N 0.469
ISCW017350 Ixodes scapularis ISCW017350 N 0.448
LCUP007363 Lucilia cuprina LCUP007363 N 0.486
LDEC006842 Leptinotarsa decemlineata LDEC006842 N 0.433
LotgiG200052 Lottia gigantea LotgiG200052 N 0.438
MCOS_0000526101 Mesocestoides corti MCOS_0000526101 N 0.561
MCOS_0000726501 Mesocestoides corti MCOS_0000726501 N 0.436
MDOA008812 Musca domestica MDOA008812 N 0.500
Myotis_brandtii_Hmgb1_10003213 Myotis brandtii Myotis_brandtii_Hmgb1_10003213 N 0.416
Myotis_brandtii_Hmgb2_10018437 Myotis brandtii Myotis_brandtii_Hmgb2_10018437 N 0.480
NV15664 Nasonia vitripennis NV15664 N 0.469
PHUM006290 Pediculus humanus PHUM006290 N 0.439
PXEA_0000566701 Protopolystoma xenopodis PXEA_0000566701 N 0.484
PXEA_0002175501 Protopolystoma xenopodis PXEA_0002175501 N 0.563
Sakowv30042012m.g Saccoglossus kowalevskii Sakowv30042012m.g N 0.498
SCUD_0000020101 Schistosoma curassoni SCUD_0000020101 N 0.501
SCUD_0000067701 Schistosoma curassoni SCUD_0000067701 N 0.424
SCUD_0001034301 Schistosoma curassoni SCUD_0001034301 N 0.437
SINV22586 Solenopsis invicta SINV22586 N 0.469
Sjc_0031360 Schistosoma japonicum Sjc_0031360 N 0.482
Sjc_0051340 Schistosoma japonicum Sjc_0051340 N 0.437
SMAR013695 Strigamia maritima SMAR013695 N 0.500
Smp_000980 Schistosoma mansoni Smp_000980 N 0.501
Smp_100090 Schistosoma mansoni Smp_100090 N 0.447
Smp_103530 Schistosoma mansoni Smp_103530 N 0.424
SMRZ_0000146101 Schistosoma margrebowiei SMRZ_0000146101 N 0.424
SMRZ_0000842001 Schistosoma margrebowiei SMRZ_0000842001 N 0.437
SMRZ_0001808901 Schistosoma margrebowiei SMRZ_0001808901 N 0.424
SMTD_0001017101 Schistosoma mattheei SMTD_0001017101 N 0.437
SMTD_0001194601 Schistosoma mattheei SMTD_0001194601 N 0.501
SMU15002907 Schmidtea mediterranea SMU15002907 N 0.459
SMU15027649 Schmidtea mediterranea SMU15027649 N 0.434
SMU15030256 Schmidtea mediterranea SMU15030256 N 0.513
SMU15030485 Schmidtea mediterranea SMU15030485 N 0.469
SPU_005572 Strongylocentrotus purpuratus SPU_005572 N 0.492
SROB_0000153901 Schistosoma rodhaini SROB_0000153901 N 0.501
SROB_0000500401 Schistosoma rodhaini SROB_0000500401 N 0.447
SROB_0001061001 Schistosoma rodhaini SROB_0001061001 N 0.424
SSLN_0000493501 Schistocephalus solidus SSLN_0000493501 N 0.530
SSLN_0001302101 Schistocephalus solidus SSLN_0001302101 N 0.433
T265_10726 Opisthorchis viverrini T265_10726 N 0.442
T265_12733 Opisthorchis viverrini T265_12733 N 0.514
T265_14643 Opisthorchis viverrini T265_14643 N 0.464
tetur02g08260 Tetranychus urticae tetur02g08260 N 0.478
tetur02g08340 Tetranychus urticae tetur02g08340 N 0.478
TRE_0000690301 Trichobilharzia regenti TRE_0000690301 N 0.415
TsM_000115400 Taenia solium TsM_000115400 N 0.561
TTAC_0000225801 Hydatigera taeniaeformis TTAC_0000225801 N 0.541
hmg-1.2 Caenorhabditis elegans WBGene00001972 N 0.436
hmgb2.S Xenopus laevis XB-GENE-1000251 N 0.442
YQE_03203 Dendroctonus ponderosae YQE_03203 N 0.417