CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Minc14081
(
Meloidogyne incognita
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
Minc14081
T335287_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc14081
Sox
20
88
PDRPLTPYMRYSKKVWPEVRAENPDSPLWDFGRIIGQLWNNLPPAEKLVYQQEYEVEKSKYEEAVKNYN
Links
Other
Sox
family TFs
Other
Meloidogyne incognita
TFs
115 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL010903
Aedes aegypti
AAEL010903
N
0.450
AAH41216
Xenopus laevis
AAH41216
N
0.462
ACAC_0000207501
Angiostrongylus cantonensis
ACAC_0000207501
N
0.548
ACEP21543
Atta cephalotes
ACEP21543
N
0.461
ACYPI008028
Acyrthosiphon pisum
ACYPI008028
N
0.450
ALUE_0000987201
Ascaris lumbricoides
ALUE_0000987201
N
0.477
ANCCAN_03785
Ancylostoma caninum
ANCCAN_03785
N
0.554
ANCCAN_09575
Ancylostoma caninum
ANCCAN_09575
N
0.554
ANCCEY_02937
Ancylostoma ceylanicum
ANCCEY_02937
N
0.554
ANCDUO_12071
Ancylostoma duodenale
ANCDUO_12071
N
0.554
ASIM_0001578601
Anisakis simplex
ASIM_0001578601
N
0.483
ASIM_0001639001
Anisakis simplex
ASIM_0001639001
N
0.483
ASU_02248
Ascaris suum
ASU_02248
N
0.477
A_05744
Schistosoma haematobium
A_05744
N
0.435
Bm7076
Brugia malayi
Bm7076
N
0.502
CapteG156119
Capitella teleta
CapteG156119
N
0.485
CBG09815
Caenorhabditis briggsae
CBG09815
N
0.521
CBN09141
Caenorhabditis brenneri
CBN09141
N
0.483
Cflo_00654--XP_395543.3_APIME
Camponotus floridanus
Cflo_00654--XP_395543.3_APIME
N
0.461
CLEC001104
Cimex lectularius
CLEC001104
N
0.448
CLEC009203
Cimex lectularius
CLEC009203
N
0.448
CPIJ007400
Culex quinquefasciatus
CPIJ007400
N
0.450
CPIJ018416
Culex quinquefasciatus
CPIJ018416
N
0.450
CpipJ_CPIJ007400
Culex pipiens
CpipJ_CPIJ007400
N
0.450
CpipJ_CPIJ018416
Culex pipiens
CpipJ_CPIJ018416
N
0.450
CRE25200
Caenorhabditis remanei
CRE25200
N
0.483
csin103376
Clonorchis sinensis
csin103376
N
0.430
D915_15883
Fasciola hepatica
D915_15883
N
0.437
DAPPUDRAFT_305068
Daphnia pulex
DAPPUDRAFT_305068
N
0.461
DME_0000063901
Dracunculus medinensis
DME_0000063901
N
0.509
ECANG7_05376
Echinococcus canadensis
ECANG7_05376
N
0.438
EEL_0000522201
Elaeophora elaphi
EEL_0000522201
N
0.502
EmuJ_000113200
Echinococcus multilocularis
EmuJ_000113200
N
0.438
ENSCING00000007774
Ciona intestinalis
ENSCING00000007774
N
0.437
ENSCJAG00000006608
Callithrix jacchus
ENSCJAG00000006608
N
0.455
ENSFCAG00000026463
Felis catus
ENSFCAG00000026463
N
0.423
SMARCE1
Gasterosteus aculeatus
ENSGACG00000018114
N
0.450
ENSGMOG00000002045
Gadus morhua
ENSGMOG00000002045
N
0.454
ENSOCUG00000016848
Oryctolagus cuniculus
ENSOCUG00000016848
N
0.456
ENSONIG00000006293
Oreochromis niloticus
ENSONIG00000006293
N
0.454
smarce1
Oryzias latipes
ENSORLG00000018629
N
0.454
ENSPFOG00000009890
Poecilia formosa
ENSPFOG00000009890
N
0.454
ENSPFOG00000019561
Poecilia formosa
ENSPFOG00000019561
N
0.454
AC123471.1
Rattus norvegicus
ENSRNOG00000018377
N
0.452
smarce1
Tetraodon nigroviridis
ENSTNIG00000014009
N
0.454
smarce1
Takifugu rubripes
ENSTRUG00000012899
N
0.454
ENSXMAG00000002642
Xiphophorus maculatus
ENSXMAG00000002642
N
0.454
EVEC_0000378901
Enterobius vermicularis
EVEC_0000378901
N
0.523
GL26801
Drosophila persimilis
FBgn0164382
N
0.427
GA26137
Drosophila pseudoobscura
FBgn0247513
N
0.427
GB50847
Apis mellifera
GB50847
N
0.461
GPLIN_000239300
Globodera pallida
GPLIN_000239300
N
0.554
Hba_20635
Heterorhabditis bacteriophora
Hba_20635
N
0.455
HCOI00022200
Haemonchus contortus
HCOI00022200
N
0.554
HCOI00569400
Haemonchus contortus
HCOI00569400
N
0.554
HDID_0000207001
Hymenolepis diminuta
HDID_0000207001
N
0.446
HelroG188630
Helobdella robusta
HelroG188630
N
0.456
HHAL002088-PA
Halyomorpha halys
HHAL002088-PA
N
0.461
HHAL007378-PA
Halyomorpha halys
HHAL007378-PA
N
0.437
HMEL010720
Heliconius melpomene
HMEL010720
N
0.440
HPBE_0000083501
Heligmosomoides bakeri
HPBE_0000083501
N
0.554
HPLM_0001658301
Haemonchus placei
HPLM_0001658301
N
0.554
Hsal_01302--XP_395543.3_APIME
Harpegnathos saltator
Hsal_01302--XP_395543.3_APIME
N
0.461
ISCW021016
Ixodes scapularis
ISCW021016
N
0.459
KGM_12870
Danaus plexippus
KGM_12870
N
0.440
L596_g22461
Steinernema carpocapsae
L596_g22461
N
0.419
L798_00593
Zootermopsis nevadensis
L798_00593
N
0.461
L892_g30100
Steinernema scapterisci
L892_g30100
N
0.419
L898_g375
Steinernema monticolum
L898_g375
N
0.420
LCUP013669
Lucilia cuprina
LCUP013669
N
0.422
LDEC003494
Leptinotarsa decemlineata
LDEC003494
N
0.461
LLOJ006040
Lutzomyia longipalpis
LLOJ006040
N
0.462
LOAG_01279
Loa loa
LOAG_01279
N
0.502
LotgiG111061
Lottia gigantea
LotgiG111061
N
0.458
maker-nMf.1.1.scaf01126-augustus-gene-0.13
Meloidogyne floridensis
maker-nMf.1.1.scaf01126-augustus-gene-0.13
N
0.741
MCOS_0000928101
Mesocestoides corti
MCOS_0000928101
N
0.452
MhA1_Contig1809.frz3.gene8
Meloidogyne hapla
MhA1_Contig1809.frz3.gene8
N
0.660
nAv.1.0.1.g03900
Acanthocheilonema viteae
nAv.1.0.1.g03900
N
0.502
nDi.2.2.2.g02092
Dirofilaria immitis
nDi.2.2.2.g02092
N
0.502
NECAME_16117
Necator americanus
NECAME_16117
N
0.554
NEMVEDRAFT_v1g177453
Nematostella vectensis
NEMVEDRAFT_v1g177453
N
0.474
nLs.2.1.2.g01047
Litomosoides sigmodontis
nLs.2.1.2.g01047
N
0.502
nOo.2.0.1.g01360
Onchocerca ochengi
nOo.2.0.1.g01360
N
0.502
NV11999
Nasonia vitripennis
NV11999
N
0.463
OESDEN_12607
Oesophagostomum dentatum
OESDEN_12607
N
0.554
OESDEN_21929
Oesophagostomum dentatum
OESDEN_21929
N
0.554
OFLC_0001285101
Onchocerca flexuosa
OFLC_0001285101
N
0.502
PPA02543
Pristionchus pacificus
PPA02543
N
0.442
PPAI002058
Phlebotomus papatasi
PPAI002058
N
0.454
PXEA_0001727801
Protopolystoma xenopodis
PXEA_0001727801
N
0.444
Sakowv30017721m.g
Saccoglossus kowalevskii
Sakowv30017721m.g
N
0.475
scaffold237-EXSNAP2012.36
Pristionchus exspectatus
scaffold237-EXSNAP2012.36
N
0.442
SCUD_0000923501
Schistosoma curassoni
SCUD_0000923501
N
0.435
Sjc_0000110
Schistosoma japonicum
Sjc_0000110
N
0.435
SMAR004982
Strigamia maritima
SMAR004982
N
0.441
Smp_154640
Schistosoma mansoni
Smp_154640
N
0.435
SMTD_0000014601
Schistosoma mattheei
SMTD_0000014601
N
0.435
SMU15005679
Schmidtea mediterranea
SMU15005679
N
0.436
SMUV_0000644601
Syphacia muris
SMUV_0000644601
N
0.477
snap_masked-nMf.1.1.scaf27159-processed-gene-0.2
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf27159-processed-gene-0.2
N
0.741
SPU_009282
Strongylocentrotus purpuratus
SPU_009282
N
0.434
SROB_0000607501
Schistosoma rodhaini
SROB_0000607501
N
0.435
SSLN_0001888901
Schistocephalus solidus
SSLN_0001888901
N
0.442
SVUK_0000819801
Strongylus vulgaris
SVUK_0000819801
N
0.554
T265_02983
Opisthorchis viverrini
T265_02983
N
0.437
TASK_0000875901
Taenia asiatica
TASK_0000875901
N
0.438
TC007745
Tribolium castaneum
TC007745
N
0.461
TCLT_0000145301
Thelazia callipaeda
TCLT_0000145301
N
0.502
TELCIR_14354
Teladorsagia circumcincta
TELCIR_14354
N
0.554
TriadG53566
Trichoplax adhaerens
TriadG53566
N
0.427
TsM_000047400
Taenia solium
TsM_000047400
N
0.438
swsn-3
Caenorhabditis elegans
WBGene00022182
N
0.528
WBGene00245293
Onchocerca volvulus
WBGene00245293
N
0.502
WUBG_07283
Wuchereria bancrofti
WUBG_07283
N
0.502
YQE_02381
Dendroctonus ponderosae
YQE_02381
N
0.461