CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGLB010942
(
Biomphalaria glabrata
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
BGLB010942
T335822_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGLB010942-PA
Sox
10
80
PRGRMSSYAFFVQTCREEHKKKHPNDTVVFTEFTKKCAEKWKEMTPKEKKRFEDMAERDKARYEREMSSYV
BGLB010942-PA
Sox
98
162
PKRALIFFFCAEERPSVRAANPGIGVADVAKELGKKWETCPNKHKFEQLAIEDKARYERDMQLYR
Links
Other
Sox
family TFs
Other
Biomphalaria glabrata
TFs
115 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL011380
Aedes aegypti
AAEL011380
N
0.476
AALB006743
Anopheles albimanus
AALB006743
N
0.476
AARA010318
Anopheles arabiensis
AARA010318
N
0.476
AATE018776
Anopheles atroparvus
AATE018776
N
0.476
ACEP16613
Atta cephalotes
ACEP16613
N
0.461
ACUA021022
Anopheles culicifacies
ACUA021022
N
0.476
ACYPI007949
Acyrthosiphon pisum
ACYPI007949
N
0.470
ADAC001494
Anopheles darlingi
ADAC001494
N
0.476
ADIR011701
Anopheles dirus
ADIR011701
N
0.476
AEPI002924
Anopheles epiroticus
AEPI002924
N
0.476
AFAF003948
Anopheles farauti
AFAF003948
N
0.476
AFUN010134
Anopheles funestus
AFUN010134
N
0.476
AGAP000005
Anopheles gambiae
AGAP000005
N
0.476
AMAM015540
Anopheles maculatus
AMAM015540
N
0.476
AMEC021909
Anopheles melas
AMEC021909
N
0.476
AMEM017336
Anopheles merus
AMEM017336
N
0.476
AMIN005344
Anopheles minimus
AMIN005344
N
0.476
AQUA004962
Anopheles quadriannulatus
AQUA004962
N
0.448
ASIS000124
Anopheles sinensis
ASIS000124
N
0.476
A_00070
Schistosoma haematobium
A_00070
N
0.421
CapteG158220
Capitella teleta
CapteG158220
N
0.460
Cflo_05895--XP_001121384.1_APIME
Camponotus floridanus
Cflo_05895--XP_001121384.1_APIME
N
0.461
CGI_10023724
Crassostrea gigas
CGI_10023724
N
0.523
CPIJ014043
Culex quinquefasciatus
CPIJ014043
N
0.488
CpipJ_CPIJ014043
Culex pipiens
CpipJ_CPIJ014043
N
0.488
D915_00818
Fasciola hepatica
D915_00818
N
0.510
DILT_0001497901
Diphyllobothrium latum
DILT_0001497901
N
0.439
ECANG7_02036
Echinococcus canadensis
ECANG7_02036
N
0.465
EmuJ_001049000
Echinococcus multilocularis
EmuJ_001049000
N
0.504
hmg1/2
Ciona intestinalis
ENSCING00000004075
N
0.447
ENSCJAG00000022832
Callithrix jacchus
ENSCJAG00000022832
N
0.416
ENSCSAVG00000000341
Ciona savignyi
ENSCSAVG00000000341
N
0.422
hmgb3b
Danio rerio
ENSDARG00000006408
N
0.416
hmgb2a
Danio rerio
ENSDARG00000029722
N
0.430
hmgb1a
Danio rerio
ENSDARG00000099175
N
0.441
ENSDNOG00000005537
Dasypus novemcinctus
ENSDNOG00000005537
N
0.416
ENSGMOG00000010060
Gadus morhua
ENSGMOG00000010060
N
0.426
HMGB2
Macaca mulatta
ENSMMUG00000020008
N
0.427
ENSOARG00000010383
Ovis aries
ENSOARG00000010383
N
0.440
ENSOARG00000011611
Ovis aries
ENSOARG00000011611
N
0.422
ENSOARG00000015382
Ovis aries
ENSOARG00000015382
N
0.440
ENSOARG00000015955
Ovis aries
ENSOARG00000015955
N
0.440
ENSOCUG00000004133
Oryctolagus cuniculus
ENSOCUG00000004133
N
0.431
ENSOCUG00000021132
Oryctolagus cuniculus
ENSOCUG00000021132
N
0.426
ENSOCUG00000027747
Oryctolagus cuniculus
ENSOCUG00000027747
N
0.421
ENSOGAG00000030563
Otolemur garnettii
ENSOGAG00000030563
N
0.416
ENSONIG00000019935
Oreochromis niloticus
ENSONIG00000019935
N
0.423
hmgb1a
Oryzias latipes
ENSORLG00000003400
N
0.440
hmgb2b
Oryzias latipes
ENSORLG00000018687
N
0.423
ENSPANG00000007527
Papio anubis
ENSPANG00000007527
N
0.440
ENSPFOG00000004794
Poecilia formosa
ENSPFOG00000004794
N
0.426
ENSPFOG00000008464
Poecilia formosa
ENSPFOG00000008464
N
0.423
ENSPMAG00000007397
Petromyzon marinus
ENSPMAG00000007397
N
0.426
Hmgb2l1
Rattus norvegicus
ENSRNOG00000013167
N
0.434
RGD1561694
Rattus norvegicus
ENSRNOG00000029107
N
0.431
Hmgb2
Rattus norvegicus
ENSRNOG00000033321
N
0.434
LOC688583
Rattus norvegicus
ENSRNOG00000050910
N
0.415
HMGB2
Sus scrofa
ENSSSCG00000009704
N
0.423
ENSTBEG00000009427
Tupaia belangeri
ENSTBEG00000009427
N
0.417
hmgb2b
Tetraodon nigroviridis
ENSTNIG00000004824
N
0.423
hmgb1b
Takifugu rubripes
ENSTRUG00000004822
N
0.416
hmgb2b
Takifugu rubripes
ENSTRUG00000005015
N
0.423
hmgb1a
Takifugu rubripes
ENSTRUG00000008452
N
0.449
ENSXMAG00000011106
Xiphophorus maculatus
ENSXMAG00000011106
N
0.426
Dsp1
Drosophila melanogaster
FBgn0011764
N
0.483
GA11488
Drosophila pseudoobscura
FBgn0071539
N
0.483
GF19115
Drosophila ananassae
FBgn0096126
N
0.483
GG17955
Drosophila erecta
FBgn0110175
N
0.483
GH12282
Drosophila grimshawi
FBgn0119761
N
0.483
GI10980
Drosophila mojavensis
FBgn0133743
N
0.483
GD17278
Drosophila simulans
FBgn0188840
N
0.483
GJ19445
Drosophila virilis
FBgn0206588
N
0.483
GK25058
Drosophila willistoni
FBgn0227017
N
0.483
GE17263
Drosophila yakuba
FBgn0234741
N
0.483
HDID_0000237901
Hymenolepis diminuta
HDID_0000237901
N
0.457
HelroG157878
Helobdella robusta
HelroG157878
N
0.453
HelroG87827
Helobdella robusta
HelroG87827
N
0.435
HMEL007340
Heliconius melpomene
HMEL007340
N
0.443
HmN_000466000
Hymenolepis microstoma
HmN_000466000
N
0.457
HNAJ_0001249801
Hymenolepis nana
HNAJ_0001249801
N
0.457
Hsal_13110--XP_001121384.1_APIME
Harpegnathos saltator
Hsal_13110--XP_001121384.1_APIME
N
0.461
ISCW017350
Ixodes scapularis
ISCW017350
N
0.451
LCUP007363
Lucilia cuprina
LCUP007363
N
0.483
LDEC006842
Leptinotarsa decemlineata
LDEC006842
N
0.456
LotgiG200052
Lottia gigantea
LotgiG200052
N
0.484
MCOS_0000526101
Mesocestoides corti
MCOS_0000526101
N
0.504
MDOA008812
Musca domestica
MDOA008812
N
0.497
Myotis_brandtii_Hmgb2_10018437
Myotis brandtii
Myotis_brandtii_Hmgb2_10018437
N
0.440
NV15664
Nasonia vitripennis
NV15664
N
0.461
PHUM006290
Pediculus humanus
PHUM006290
N
0.473
PTRK_0000986200
Parastrongyloides trichosuri
PTRK_0000986200
N
0.423
PXEA_0000566701
Protopolystoma xenopodis
PXEA_0000566701
N
0.500
PXEA_0002175501
Protopolystoma xenopodis
PXEA_0002175501
N
0.472
Sakowv30042012m.g
Saccoglossus kowalevskii
Sakowv30042012m.g
N
0.451
SCUD_0000020101
Schistosoma curassoni
SCUD_0000020101
N
0.505
SCUD_0001034301
Schistosoma curassoni
SCUD_0001034301
N
0.421
SINV22586
Solenopsis invicta
SINV22586
N
0.461
Sjc_0031360
Schistosoma japonicum
Sjc_0031360
N
0.467
SMAR013695
Strigamia maritima
SMAR013695
N
0.475
Smp_000980
Schistosoma mansoni
Smp_000980
N
0.505
SMRZ_0000842001
Schistosoma margrebowiei
SMRZ_0000842001
N
0.421
SMTD_0001017101
Schistosoma mattheei
SMTD_0001017101
N
0.421
SMTD_0001194601
Schistosoma mattheei
SMTD_0001194601
N
0.505
SMU15030256
Schmidtea mediterranea
SMU15030256
N
0.456
SPAL_0001030300
Strongyloides papillosus
SPAL_0001030300
N
0.423
SROB_0000153901
Schistosoma rodhaini
SROB_0000153901
N
0.505
SSLN_0000493501
Schistocephalus solidus
SSLN_0000493501
N
0.439
SSTP_0000371800
Strongyloides stercoralis
SSTP_0000371800
N
0.423
SVE_0494300
Strongyloides venezuelensis
SVE_0494300
N
0.423
T265_12733
Opisthorchis viverrini
T265_12733
N
0.515
tetur02g08260
Tetranychus urticae
tetur02g08260
N
0.446
tetur02g08340
Tetranychus urticae
tetur02g08340
N
0.443
TsM_000115400
Taenia solium
TsM_000115400
N
0.504
TTAC_0000225801
Hydatigera taeniaeformis
TTAC_0000225801
N
0.465
YQE_03203
Dendroctonus ponderosae
YQE_03203
N
0.427