genemark-nMf.1.1.scaf06964-processed-gene-0.3 (Meloidogyne floridensis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 genemark-nMf.1.1.scaf06964-processed-gene-0.3 T336323_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
genemark-nMf.1.1.scaf06964-processed-gene-0.3-mRNA-1 Sox 62 130
genemark-nMf.1.1.scaf06964-processed-gene-0.3-mRNA-1 Sox 148 216

Links

Other Sox family TFs
Other Meloidogyne floridensis TFs

155 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0000857301 Angiostrongylus cantonensis ACAC_0000857301 N 0.000
ACOC_0000653601 Angiostrongylus costaricensis ACOC_0000653601 N 0.000
ALUE_0000448701 Ascaris lumbricoides ALUE_0000448701 N 0.000
ALUE_0000605501 Ascaris lumbricoides ALUE_0000605501 N 0.000
ANCCAN_08230 Ancylostoma caninum ANCCAN_08230 I 0.000
ANCCAN_12424 Ancylostoma caninum ANCCAN_12424 I 0.000
ANCCAN_17708 Ancylostoma caninum ANCCAN_17708 I 0.000
ANCCAN_19939 Ancylostoma caninum ANCCAN_19939 N 0.000
ANCCAN_21637 Ancylostoma caninum ANCCAN_21637 N 0.000
ANCCAN_21638 Ancylostoma caninum ANCCAN_21638 I 0.000
ANCCEY_10464 Ancylostoma ceylanicum ANCCEY_10464 N 0.000
ANCDUO_10137 Ancylostoma duodenale ANCDUO_10137 N 0.000
ANCDUO_11855 Ancylostoma duodenale ANCDUO_11855 N 0.000
ANCDUO_11856 Ancylostoma duodenale ANCDUO_11856 I 0.000
ANCDUO_24920 Ancylostoma duodenale ANCDUO_24920 I 0.000
ANCDUO_26276 Ancylostoma duodenale ANCDUO_26276 N 0.000
ASIM_0000156001 Anisakis simplex ASIM_0000156001 N 0.000
ASU_05752 Ascaris suum ASU_05752 N 0.000
ASU_07820 Ascaris suum ASU_07820 N 0.000
Bm6643 Brugia malayi Bm6643 N 0.000
BTMF_0000229601 Brugia timori BTMF_0000229601 N 0.000
DICVIV_01337 Dictyocaulus viviparus DICVIV_01337 N 0.000
DME_0000590001 Dracunculus medinensis DME_0000590001 N 0.000
EEL_0000629001 Elaeophora elaphi EEL_0000629001 N 0.000
EFV62220 Trichinella spiralis EFV62220 N 0.000
EVEC_0000171701 Enterobius vermicularis EVEC_0000171701 N 0.000
GPUH_0000029001 Gongylonema pulchrum GPUH_0000029001 N 0.000
HCOI00417600 Haemonchus contortus HCOI00417600 N 0.000
HCOI01420700 Haemonchus contortus HCOI01420700 N 0.000
HCOI02106600 Haemonchus contortus HCOI02106600 N 0.000
HPBE_0001796801 Heligmosomoides bakeri HPBE_0001796801 N 0.000
HPBE_0002310801 Heligmosomoides bakeri HPBE_0002310801 N 0.000
HPBE_0002408301 Heligmosomoides bakeri HPBE_0002408301 I 0.000
HPLM_0000803901 Haemonchus placei HPLM_0000803901 N 0.000
L596_g8199 Steinernema carpocapsae L596_g8199 N 0.000
L889_g29516 Steinernema feltiae L889_g29516 N 0.000
L892_g2503 Steinernema scapterisci L892_g2503 N 0.000
LOAG_14354 Loa loa LOAG_14354 N 0.000
maker-nMf.1.1.scaf04887-augustus-gene-0.6 Meloidogyne floridensis maker-nMf.1.1.scaf04887-augustus-gene-0.6 N 0.000
MhA1_Contig400.frz3.gene18 Meloidogyne hapla MhA1_Contig400.frz3.gene18 N 0.000
Minc03634 Meloidogyne incognita Minc03634 N 0.000
Minc04648 Meloidogyne incognita Minc04648 N 0.000
nAv.1.0.1.g09805 Acanthocheilonema viteae nAv.1.0.1.g09805 N 0.000
NBR_0000004401 Nippostrongylus brasiliensis NBR_0000004401 N 0.000
NBR_0001132501 Nippostrongylus brasiliensis NBR_0001132501 N 0.000
nDi.2.2.2.g04713 Dirofilaria immitis nDi.2.2.2.g04713 N 0.000
NECAME_10840 Necator americanus NECAME_10840 N 0.000
NECAME_16525 Necator americanus NECAME_16525 N 0.000
NEMVEDRAFT_v1g59568 Nematostella vectensis NEMVEDRAFT_v1g59568 N 0.000
nLs.2.1.2.g02941 Litomosoides sigmodontis nLs.2.1.2.g02941 N 0.000
nOo.2.0.1.g01970 Onchocerca ochengi nOo.2.0.1.g01970 N 0.000
OFLC_0000496201 Onchocerca flexuosa OFLC_0000496201 N 0.000
PPA06513 Pristionchus pacificus PPA06513 N 0.000
Ppa-hmg-1.1 Pristionchus pacificus PPA22767 N 0.000
PTRK_0001161700 Parastrongyloides trichosuri PTRK_0001161700 N 0.000
RSKR_0000128800 Rhabditophanes kr3021 RSKR_0000128800 N 0.000
RSKR_0000269200 Rhabditophanes kr3021 RSKR_0000269200 N 0.000
scaffold113-EXSNAP2012.49 Pristionchus exspectatus scaffold113-EXSNAP2012.49 N 0.000
scaffold1425-EXSNAP2012.3 Pristionchus exspectatus scaffold1425-EXSNAP2012.3 N 0.000
scaffold98-EXSNAP2012.51 Pristionchus exspectatus scaffold98-EXSNAP2012.51 N 0.000
SMUV_0000634201 Syphacia muris SMUV_0000634201 N 0.000
SPAL_0001085700 Strongyloides papillosus SPAL_0001085700 N 0.000
SSTP_0000585600 Strongyloides stercoralis SSTP_0000585600 N 0.000
SVE_0954900 Strongyloides venezuelensis SVE_0954900 N 0.000
SVUK_0001398701 Strongylus vulgaris SVUK_0001398701 N 0.000
TELCIR_05217 Teladorsagia circumcincta TELCIR_05217 N 0.000
TELCIR_22690 Teladorsagia circumcincta TELCIR_22690 N 0.000
WBGene00237022 Onchocerca volvulus WBGene00237022 N 0.000