CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HNAJ_0000227501
(
Hymenolepis nana
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
HNAJ_0000227501
T336446_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HNAJ_0000227501-mRNA-1
Sox
8
78
PKRALTPYAVFVQSMRDEHKKKNPNSSVDFATFSKECSATWKTLSAKEKKKFEDLAAKDKERYQKDMKNYK
HNAJ_0000227501-mRNA-1
Sox
95
161
PKKPMSAFFLFCQDERAKVREAHPDWSVGQCAKELASRWEQCKNRSKYESQATQEKAKYQKAMEKYN
Links
Other
Sox
family TFs
Other
Hymenolepis nana
TFs
74 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Afo_R009325
Aptenodytes forsteri
Afo_R009325
N
0.000
Alligator_sinensis_CCG003694.1
Alligator sinensis
Alligator_sinensis_CCG003694.1
N
0.000
Brh_R007854
Buceros rhinoceros
Brh_R007854
N
0.000
Cmyd_10010411
Chelonia mydas
Cmyd_10010411
N
0.000
SALL3
Callithrix jacchus
ENSCJAG00000007332
N
0.000
ENSCSAG00000018244
Chlorocebus sabaeus
ENSCSAG00000018244
N
0.000
sall1b
Danio rerio
ENSDARG00000075891
N
0.000
SALL3
Dasypus novemcinctus
ENSDNOG00000025483
N
0.000
SALL3
Homo sapiens
ENSG00000256463
N
0.000
sall1a
Gasterosteus aculeatus
ENSGACG00000016702
N
0.000
SALL3
Gorilla gorilla
ENSGGOG00000008127
N
0.000
SALL3
Loxodonta africana
ENSLAFG00000013521
N
0.000
ENSLOCG00000007283
Lepisosteus oculatus
ENSLOCG00000007283
N
0.000
SALL3
Myotis lucifugus
ENSMLUG00000010582
N
0.000
SALL3
Macaca mulatta
ENSMMUG00000000286
N
0.000
SALL1
Ornithorhynchus anatinus
ENSOANG00000013399
N
0.000
SALL1
Otolemur garnettii
ENSOGAG00000027316
N
0.000
SALL3
Otolemur garnettii
ENSOGAG00000031681
N
0.000
ENSONIG00000002831
Oreochromis niloticus
ENSONIG00000002831
N
0.000
sall1a
Oryzias latipes
ENSORLG00000013827
N
0.000
ENSP00000299466-D1
Bos grunniens
ENSP00000299466-D1
N
0.000
SALL3
Procavia capensis
ENSPCAG00000006522
N
0.000
ENSPFOG00000015799
Poecilia formosa
ENSPFOG00000015799
N
0.000
Sall1
Rattus norvegicus
ENSRNOG00000013907
N
0.000
Sall3
Rattus norvegicus
ENSRNOG00000026116
N
0.000
SALL3
Sus scrofa
ENSSSCG00000004858
N
0.000
sall1a
Tetraodon nigroviridis
ENSTNIG00000004257
N
0.000
sall1a
Takifugu rubripes
ENSTRUG00000008950
N
0.000
Gfo_R000617
Geospiza fortis
Gfo_R000617
N
0.000
Myotis_brandtii_Sall3_10034211
Myotis brandtii
Myotis_brandtii_Sall3_10034211
N
0.000
Ogr15828
Ophisaurus gracilis
Ogr15828
N
0.000
Tal_R008175
Tyto alba
Tal_R008175
N
0.000
sall1
Xenopus tropicalis
XB-GENE-491393
N
0.000
sall1.L
Xenopus laevis
XB-GENE-866060
N
0.000
XP_002936493
Xenopus tropicalis
XP_002936493
N
0.000
XP_002936494
Xenopus tropicalis
XP_002936494
N
0.000
XP_002936495
Xenopus tropicalis
XP_002936495
N
0.000