CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HPLM_0000259001
(
Haemonchus placei
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
HPLM_0000259001
T336471_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HPLM_0000259001-mRNA-1
Sox
2
64
TKKKSNGFMYFADSRRAFYEAEAGCNFGSKRLVERAADDWKQMSHTEQEHWKTESKRRLEEQV
Links
Other
Sox
family TFs
Other
Haemonchus placei
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCAN_05319
Ancylostoma caninum
ANCCAN_05319
N
0.698
CGOC_0000090501
Cylicostephanus goldi
CGOC_0000090501
N
0.711
HPLM_0000283201
Haemonchus placei
HPLM_0000283201
N
0.741
LOAG_10530
Loa loa
LOAG_10530
N
0.431
NBR_0000978401
Nippostrongylus brasiliensis
NBR_0000978401
N
0.691
NECAME_05891
Necator americanus
NECAME_05891
N
0.711
TELCIR_12951
Teladorsagia circumcincta
TELCIR_12951
N
0.741
TELCIR_17114
Teladorsagia circumcincta
TELCIR_17114
N
0.741
TELCIR_19664
Teladorsagia circumcincta
TELCIR_19664
N
0.741
WUBG_12231
Wuchereria bancrofti
WUBG_12231
N
0.438