CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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T265_14643
(
Opisthorchis viverrini
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
T265_14643
T337108_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
T265_14643
Sox
9
79
PKHPMSAYACFVQVIREEHRKKHPNENVIFSEFSKKCAEKWKQMSNEQRRCFEEMAKLDLDRFNREMAHYV
T265_14643
Sox
99
165
PKRSWSAFFFFCDAFRSKIRNEHPDWKVSDIAKELGRRWEECTDKEKYERHAQNDKLRYEQDMQKYK
Links
Other
Sox
family TFs
Other
Opisthorchis viverrini
TFs
132 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL011380
Aedes aegypti
AAEL011380
N
0.437
AALB006743
Anopheles albimanus
AALB006743
N
0.437
AARA010318
Anopheles arabiensis
AARA010318
N
0.437
AATE018776
Anopheles atroparvus
AATE018776
N
0.437
ACEP16613
Atta cephalotes
ACEP16613
N
0.417
ACOC_0000768601
Angiostrongylus costaricensis
ACOC_0000768601
N
0.435
ACUA021022
Anopheles culicifacies
ACUA021022
N
0.437
ACYPI007949
Acyrthosiphon pisum
ACYPI007949
N
0.424
ADAC001494
Anopheles darlingi
ADAC001494
N
0.437
ADIR011701
Anopheles dirus
ADIR011701
N
0.437
AEPI002924
Anopheles epiroticus
AEPI002924
N
0.437
AFAF003948
Anopheles farauti
AFAF003948
N
0.437
AFUN010134
Anopheles funestus
AFUN010134
N
0.437
AGAP000005
Anopheles gambiae
AGAP000005
N
0.437
AMAM015540
Anopheles maculatus
AMAM015540
N
0.437
AMEC021909
Anopheles melas
AMEC021909
N
0.437
AMEM017336
Anopheles merus
AMEM017336
N
0.437
AMIN005344
Anopheles minimus
AMIN005344
N
0.437
ASIS000124
Anopheles sinensis
ASIS000124
N
0.437
ASU_03902
Ascaris suum
ASU_03902
N
0.416
A_05510
Schistosoma haematobium
A_05510
N
0.647
BGIBMGA001132
Bombyx mori
BGIBMGA001132
N
0.415
Bm4180
Brugia malayi
Bm4180
N
0.416
CapteG158220
Capitella teleta
CapteG158220
N
0.436
CBG17468
Caenorhabditis briggsae
CBG17468
N
0.417
CBN17977
Caenorhabditis brenneri
CBN17977
N
0.417
Cflo_05895--XP_001121384.1_APIME
Camponotus floridanus
Cflo_05895--XP_001121384.1_APIME
N
0.417
CJA09678
Caenorhabditis japonica
CJA09678
N
0.417
CJA42049
Caenorhabditis japonica
CJA42049
N
0.417
CPIJ014043
Culex quinquefasciatus
CPIJ014043
N
0.430
CpipJ_CPIJ014043
Culex pipiens
CpipJ_CPIJ014043
N
0.430
csin110255
Clonorchis sinensis
csin110255
N
0.741
D915_00818
Fasciola hepatica
D915_00818
N
0.490
D915_15256
Fasciola hepatica
D915_15256
N
0.738
D917_08189
Trichinella nativa
D917_08189
N
0.433
D918_07195
Trichuris suis
D918_07195
N
0.436
DAPPUDRAFT_232871
Daphnia pulex
DAPPUDRAFT_232871
N
0.472
DAPPUDRAFT_306496
Daphnia pulex
DAPPUDRAFT_306496
N
0.425
DILT_0000548601
Diphyllobothrium latum
DILT_0000548601
N
0.534
DILT_0001497901
Diphyllobothrium latum
DILT_0001497901
N
0.537
DME_0001055201
Dracunculus medinensis
DME_0001055201
N
0.421
ECANG7_02036
Echinococcus canadensis
ECANG7_02036
N
0.528
ECANG7_05481
Echinococcus canadensis
ECANG7_05481
N
0.512
ECPE_0001414101
Echinostoma caproni
ECPE_0001414101
N
0.430
EEL_0000068601
Elaeophora elaphi
EEL_0000068601
N
0.416
EmuJ_000768300
Echinococcus multilocularis
EmuJ_000768300
N
0.512
EmuJ_001049000
Echinococcus multilocularis
EmuJ_001049000
N
0.550
ENSOARG00000011611
Ovis aries
ENSOARG00000011611
N
0.418
ENSPFOG00000008464
Poecilia formosa
ENSPFOG00000008464
N
0.419
EVEC_0000577301
Enterobius vermicularis
EVEC_0000577301
N
0.416
Dsp1
Drosophila melanogaster
FBgn0011764
N
0.433
GA11488
Drosophila pseudoobscura
FBgn0071539
N
0.433
GF19115
Drosophila ananassae
FBgn0096126
N
0.433
GG17955
Drosophila erecta
FBgn0110175
N
0.433
GH12282
Drosophila grimshawi
FBgn0119761
N
0.433
GI10980
Drosophila mojavensis
FBgn0133743
N
0.433
GD17278
Drosophila simulans
FBgn0188840
N
0.433
GJ19445
Drosophila virilis
FBgn0206588
N
0.433
GK25058
Drosophila willistoni
FBgn0227017
N
0.433
GE17263
Drosophila yakuba
FBgn0234741
N
0.433
fgenesh2_pm.scaffold_24000033
Branchiostoma floridae
fgenesh2_pm.scaffold_24000033
N
0.462
Hba_13817
Heterorhabditis bacteriophora
Hba_13817
N
0.433
HCOI00860100
Haemonchus contortus
HCOI00860100
N
0.435
HDID_0000237901
Hymenolepis diminuta
HDID_0000237901
N
0.510
HDID_0000408601
Hymenolepis diminuta
HDID_0000408601
N
0.570
HelroG157878
Helobdella robusta
HelroG157878
N
0.450
HelroG87827
Helobdella robusta
HelroG87827
N
0.429
HMEL007340
Heliconius melpomene
HMEL007340
N
0.430
HmN_000466000
Hymenolepis microstoma
HmN_000466000
N
0.510
HmN_000813000
Hymenolepis microstoma
HmN_000813000
N
0.555
HNAJ_0000974401
Hymenolepis nana
HNAJ_0000974401
N
0.570
HNAJ_0001249801
Hymenolepis nana
HNAJ_0001249801
N
0.510
Hsal_13110--XP_001121384.1_APIME
Harpegnathos saltator
Hsal_13110--XP_001121384.1_APIME
N
0.417
ISCW017350
Ixodes scapularis
ISCW017350
N
0.487
L889_g13533
Steinernema feltiae
L889_g13533
N
0.419
L892_g17551
Steinernema scapterisci
L892_g17551
N
0.416
L893_g5947
Steinernema glaseri
L893_g5947
N
0.419
LCUP007363
Lucilia cuprina
LCUP007363
N
0.433
LOAG_04936
Loa loa
LOAG_04936
N
0.416
MCOS_0000526101
Mesocestoides corti
MCOS_0000526101
N
0.553
MCOS_0000726501
Mesocestoides corti
MCOS_0000726501
N
0.563
MDOA008812
Musca domestica
MDOA008812
N
0.433
nAv.1.0.1.g02101
Acanthocheilonema viteae
nAv.1.0.1.g02101
N
0.416
NBR_0000911001
Nippostrongylus brasiliensis
NBR_0000911001
N
0.435
nDi.2.2.2.g04979
Dirofilaria immitis
nDi.2.2.2.g04979
N
0.416
NECAME_09126
Necator americanus
NECAME_09126
N
0.435
NV15664
Nasonia vitripennis
NV15664
N
0.434
PEQ_0000150901
Parascaris equorum
PEQ_0000150901
N
0.416
PTRK_0000986200
Parastrongyloides trichosuri
PTRK_0000986200
N
0.418
PXEA_0000566701
Protopolystoma xenopodis
PXEA_0000566701
N
0.523
PXEA_0000637001
Protopolystoma xenopodis
PXEA_0000637001
N
0.431
PXEA_0002175501
Protopolystoma xenopodis
PXEA_0002175501
N
0.520
Sakowv30042012m.g
Saccoglossus kowalevskii
Sakowv30042012m.g
N
0.433
SBAD_0000405201
Soboliphyme baturini
SBAD_0000405201
N
0.432
SCUD_0000020101
Schistosoma curassoni
SCUD_0000020101
N
0.544
SCUD_0000067701
Schistosoma curassoni
SCUD_0000067701
N
0.647
SINV22586
Solenopsis invicta
SINV22586
N
0.417
Sjc_0031360
Schistosoma japonicum
Sjc_0031360
N
0.520
SMAR013695
Strigamia maritima
SMAR013695
N
0.454
Smp_000980
Schistosoma mansoni
Smp_000980
N
0.544
Smp_100090
Schistosoma mansoni
Smp_100090
N
0.419
Smp_103530
Schistosoma mansoni
Smp_103530
N
0.647
SMRZ_0000146101
Schistosoma margrebowiei
SMRZ_0000146101
N
0.647
SMRZ_0001808901
Schistosoma margrebowiei
SMRZ_0001808901
N
0.647
SMTD_0001194601
Schistosoma mattheei
SMTD_0001194601
N
0.544
SMU15002907
Schmidtea mediterranea
SMU15002907
N
0.417
SMU15016767
Schmidtea mediterranea
SMU15016767
N
0.464
SMU15030256
Schmidtea mediterranea
SMU15030256
N
0.492
SMUV_0000232601
Syphacia muris
SMUV_0000232601
N
0.419
SPAL_0001030300
Strongyloides papillosus
SPAL_0001030300
N
0.418
SPU_005572
Strongylocentrotus purpuratus
SPU_005572
N
0.443
SROB_0000153901
Schistosoma rodhaini
SROB_0000153901
N
0.544
SROB_0000500401
Schistosoma rodhaini
SROB_0000500401
N
0.419
SROB_0001061001
Schistosoma rodhaini
SROB_0001061001
N
0.647
SSLN_0000493501
Schistocephalus solidus
SSLN_0000493501
N
0.537
SSTP_0000371800
Strongyloides stercoralis
SSTP_0000371800
N
0.418
SVE_0494300
Strongyloides venezuelensis
SVE_0494300
N
0.418
T265_12733
Opisthorchis viverrini
T265_12733
N
0.516
TCLT_0000879501
Thelazia callipaeda
TCLT_0000879501
N
0.416
TCNE_0000567001
Toxocara canis
TCNE_0000567001
N
0.416
TELCIR_07111
Teladorsagia circumcincta
TELCIR_07111
N
0.435
tetur02g08260
Tetranychus urticae
tetur02g08260
N
0.453
tetur02g08340
Tetranychus urticae
tetur02g08340
N
0.456
TMUE_s0235000800
Trichuris muris
TMUE_s0235000800
N
0.420
TRE_0000506801
Trichobilharzia regenti
TRE_0000506801
N
0.626
TsM_000088100
Taenia solium
TsM_000088100
N
0.509
TsM_000115400
Taenia solium
TsM_000115400
N
0.550
TTAC_0000194001
Hydatigera taeniaeformis
TTAC_0000194001
N
0.487
TTAC_0000225801
Hydatigera taeniaeformis
TTAC_0000225801
N
0.528
TTRE_0000338301
Trichuris trichiura
TTRE_0000338301
N
0.431
hmg-1.2
Caenorhabditis elegans
WBGene00001972
N
0.417
WBGene00245261
Onchocerca volvulus
WBGene00245261
N
0.416