CpipJ_CPIJ007784 (Culex pipiens)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00907 (T-box) IPR001699 CpipJ_CPIJ007784 T339225_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
org-1
M03988_2.00 		Drosophila melanogaster
DRGTGTBAD
HTVACACYH		 SELEX
Nitta et al.(2015)
org-1_1 		0.755 0.753
org-1
M03989_2.00 		Drosophila melanogaster
TRACACYTARGTGTGA
TCACACYTARGTGTYA		 SELEX
Nitta et al.(2015)
org-1_2 		0.755 0.753
Tbx1
M00832_2.00 		Mus musculus
NRGTGTGAANN
NNTTCACACYN		 PBM
Weirauch et al.(2013)
pTH3822 		0.744 0.703
TBX1
M03570_2.00 		Homo sapiens
ARGTGTKAAAWHARGTGTGA
TCACACYTDWTTTMACACYT		 SELEX
Jolma et al.(2013)
TBX1_1 		0.744 0.703
TBX1
M03571_2.00 		Homo sapiens
AGGTGTGAWWTTCACACCT
AGGTGTGAAWWTCACACCT		 SELEX
Jolma et al.(2013)
TBX1_2 		0.744 0.703
TBX1
M03572_2.00 		Homo sapiens
AGGTGTGA
TCACACCT		 SELEX
Jolma et al.(2013)
TBX1_3 		0.744 0.703
TBX1
M03573_2.00 		Homo sapiens
YYTCACACMTYWRAGGTGTGAAA
TTTCACACCTYWRAKGTGTGARR		 SELEX
Jolma et al.(2013)
TBX1_4 		0.744 0.703
TBX1
M03574_2.00 		Homo sapiens
YTCACACCTDKAGGTGTGAA
TTCACACCTMHAGGTGTGAR		 SELEX
Jolma et al.(2013)
TBX1_5 		0.744 0.703
TBX1
M05821_2.00 		Homo sapiens
BDRGGTGTGARV
BYTCACACCYHV		 SELEX
Yin et al.(2017)
TBX1_eDBD_HT-SELEX 		0.744 0.703
Tbx1
M11386_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX1_07 		0.744 0.703
TBX1
M05822_2.00 		Homo sapiens
DNWGGTGTGARN
NYTCACACCWNH		 SELEX
Yin et al.(2017)
TBX1_eDBD_Methyl-HT-SELEX 		0.744 0.703
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CpipJ_CPIJ007784-RA T-box 181 371

Links

Other T-box family TFs
Other Culex pipiens TFs

115 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_011_00061 Aquilegia coerulea Aquca_011_00061 N 0.000
Aquca_021_00065 Aquilegia coerulea Aquca_021_00065 N 0.000
cassava38785.m1 Manihot esculenta cassava38785.m1 N 0.000
Cla012038 Citrullus lanatus Cla012038 N 0.000
Cucsa.087900 Cucumis sativus Cucsa.087900 N 0.000
gene01356-v1.0-hybrid Fragaria vesca gene01356-v1.0-hybrid N 0.000
GLYMA19G26735 Glycine max GLYMA19G26735 N 0.000
GRMZM2G342217 Zea mays GRMZM2G342217 N 0.000
Lus10041540.g Linum usitatissimum Lus10041540.g N 0.000
MTR_7g027190 Medicago truncatula MTR_7g027190 N 0.000
ONIVA11G13990 Oryza nivara ONIVA11G13990 N 0.000
Pm016121 Prunus mume Pm016121 N 0.000
Si027708m.g Setaria italica Si027708m.g N 0.000
TCM_017269 Theobroma cacao TCM_017269 N 0.000