TBX19 (Vicugna pacos)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 ENSVPAG00000000446 T340592_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TBX19
M03562_2.00 		Homo sapiens
NDTVRCACVTANGTGYKANN
NNTMRCACNTABGTGYBAHN		 SELEX
Jolma et al.(2013)
TBX19_1 		0.912 0.983
TBX19
M05803_2.00 		Homo sapiens
NAGGTGYBAHWDTMRCACNTN
NANGTGYKAHWDTVRCACCTN		 SELEX
Yin et al.(2017)
TBX19_eDBD_HT-SELEX 		0.912 0.983
TBX19
M05804_2.00 		Homo sapiens
NANGTGYKAHWDTVRCACSTN
NASGTGYBAHWDTMRCACNTN		 SELEX
Yin et al.(2017)
TBX19_eDBD_Methyl-HT-SELEX 		0.912 0.983
T
M05809_2.00 		Homo sapiens
NANGTGYGAHWWNTVRCACCTN
NAGGTGYBANWWDTCRCACNTN		 SELEX
Yin et al.(2017)
T_eDBD_HT-SELEX_1 		0.868 0.830
T
M05810_2.00 		Homo sapiens
DTCRCAYVTABGTGYGAH
DTCRCACVTABRTGYGAH		 SELEX
Yin et al.(2017)
T_eDBD_HT-SELEX_2 		0.868 0.830
T
M09427_2.00 		Homo sapiens
BYNVCANNNVDGTGWKARDN
NHYTMWCACHBNNNTGBNRV		 Misc
Kulakovskiy et al.(2013)
BRAC_HUMAN.H11MO.0.A 		0.868 0.830
T
M09431_2.00 		Mus musculus
VVNRAWTTSACASNYHDVTGBNMAN
NTKNVCABHDRNSTGTSAAWTYNBB		 Misc
Kulakovskiy et al.(2013)
BRAC_MOUSE.H11MO.0.B 		0.868 0.830
T
M09651_2.00 		Mus musculus
NYTVDCASNNNNSTGHBARNN
NNYTVDCASNNNNSTGHBARN		 Misc
Heinz et al.(2010)
Mesoendoderm-Brachyury_GSE54963 		0.868 0.830
T
M11384_2.00 		Homo sapiens
MKHBTSACACSTAGGTGTGAAATK
MATTTCACACCTASGTGTSAVDMK		 Transfac
Matys et al.(2006)
V$BRACH_01 		0.868 0.830
T
M05811_2.00 		Homo sapiens
NABGTGYGAHWWNTVRCACSTN
NASGTGYBANWWDTCRCACVTN		 SELEX
Yin et al.(2017)
T_eDBD_Methyl-HT-SELEX_1 		0.868 0.830
T
M05812_2.00 		Homo sapiens
DTMRCAYVTABGTGYKAH
DTMRCACVTABRTGYKAH		 SELEX
Yin et al.(2017)
T_eDBD_Methyl-HT-SELEX_2 		0.868 0.830
byn
M03984_2.00 		Drosophila melanogaster
ABGTGYGADDD
HHHTCRCACVT		 SELEX
Nitta et al.(2015)
byn_1 		0.816 0.750
byn
M03985_2.00 		Drosophila melanogaster
DNGTGYBAHWWDTVRCACNH
DNGTGYBAHWWDTVRCACNH		 SELEX
Nitta et al.(2015)
byn_2 		0.816 0.750
byn
M03986_2.00 		Drosophila melanogaster
RDGTGYGADNDNDNNNNNNDRDGTGYGADD
HHTCRCACHYHNNNNNNHNHNHTCRCACHY		 SELEX
Nitta et al.(2015)
byn_3 		0.816 0.750
byn
M03987_2.00 		Drosophila melanogaster
NNTMRCAYNWWNRTGYKAHN
NDTMRCAYNWWNRTGYKANN		 SELEX
Nitta et al.(2015)
byn_4 		0.816 0.750
byn
M06453_2.00 		Drosophila melanogaster
ADGTGCDA
THGCACHT		 B1H
Zhu et al.(2011)
byn_FlyReg_FBgn0011723 		0.816 0.750
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSVPAP00000000417 T-box 43 218

Links

Other T-box family TFs
Other Vicugna pacos TFs

177 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R009070 Calypte anna Aan_R009070 I
Aan_R013218 Calypte anna Aan_R013218 I
Afo_R007963 Aptenodytes forsteri Afo_R007963 I
Alligator_sinensis_CCG007971.1 Alligator sinensis Alligator_sinensis_CCG007971.1 I
Alligator_sinensis_CCG012315.1 Alligator sinensis Alligator_sinensis_CCG012315.1 I
Cmyd_10007930 Chelonia mydas Cmyd_10007930 I
Cmyd_10008393 Chelonia mydas Cmyd_10008393 I
SREBF2 Anolis carolinensis ENSACAG00000004146 I
ENSAMEG00000005129 Ailuropoda melanoleuca ENSAMEG00000005129 I
ENSAMEG00000015506 Ailuropoda melanoleuca ENSAMEG00000015506 I
ENSAMXG00000008028 Astyanax mexicanus ENSAMXG00000008028 I
ENSAMXG00000009016 Astyanax mexicanus ENSAMXG00000009016 I
ENSAPLG00000003145 Anas platyrhynchos ENSAPLG00000003145 I
SREBF1 Bos taurus ENSBTAG00000007884 I
SREBF2 Bos taurus ENSBTAG00000014265 I
ENSBTAP00000018956-D1 Bos grunniens ENSBTAP00000018956-D1 I
SREBF2 Canis familiaris ENSCAFG00000001013 I
SREBF1 Canis familiaris ENSCAFG00000018436 I
ENSCJAG00000002378 Callithrix jacchus ENSCJAG00000002378 I
SREBF1 Callithrix jacchus ENSCJAG00000008953 I
SREBF1 Cavia porcellus ENSCPOG00000002439 I
SREBF2 Cavia porcellus ENSCPOG00000013199 I
ENSCSAG00000005734 Chlorocebus sabaeus ENSCSAG00000005734 I
ENSCSAG00000008412 Chlorocebus sabaeus ENSCSAG00000008412 I
srebf2 Danio rerio ENSDARG00000063438 I
srebf1 Danio rerio ENSDARG00000067607 I
SREBF2 Dasypus novemcinctus ENSDNOG00000048031 I
Srebf2 Dipodomys ordii ENSDORG00000000691 I
Srebf1 Dipodomys ordii ENSDORG00000012333 I
SREBF1 Equus caballus ENSECAG00000019802 I
SREBF2 Equus caballus ENSECAG00000024608 I
SREBF2 Erinaceus europaeus ENSEEUG00000003437 I
SREBF2 Echinops telfairi ENSETEG00000000459 I
SREBF1 Echinops telfairi ENSETEG00000004179 I
ENSFALG00000011811 Ficedula albicollis ENSFALG00000011811 I
ENSFALG00000013762 Ficedula albicollis ENSFALG00000013762 I
SREBF1 Felis catus ENSFCAG00000001983 I
SREBF2 Felis catus ENSFCAG00000014289 I
SREBF1 Homo sapiens ENSG00000072310 D
SREBF2 Homo sapiens ENSG00000198911 D
srebf2 Gasterosteus aculeatus ENSGACG00000007259 I
srebf1 Gasterosteus aculeatus ENSGACG00000012064 I
ENSGALG00000011916 Gallus gallus ENSGALG00000011916 I
SREBF1 Gallus gallus ENSGALG00000027188 I
SREBF1 Gorilla gorilla ENSGGOG00000002713 I
SREBF2 Gorilla gorilla ENSGGOG00000012065 I
ENSGMOG00000006325 Gadus morhua ENSGMOG00000006325 I
ENSLACG00000013149 Latimeria chalumnae ENSLACG00000013149 I
SREBF2 Loxodonta africana ENSLAFG00000005791 I
SREBF1 Loxodonta africana ENSLAFG00000021644 I
ENSLOCG00000008766 Lepisosteus oculatus ENSLOCG00000008766 I
ENSLOCG00000011887 Lepisosteus oculatus ENSLOCG00000011887 I
ENSMEUG00000001306 Macropus eugenii ENSMEUG00000001306 I
ENSMEUG00000011986 Macropus eugenii ENSMEUG00000011986 I
SREBF2 Meleagris gallopavo ENSMGAG00000012074 I
SREBF2 Microcebus murinus ENSMICG00000000913 I
SREBF1 Microcebus murinus ENSMICG00000012535 I
SREBF2 Myotis lucifugus ENSMLUG00000002549 I
SREBF2 Macaca mulatta ENSMMUG00000003357 I
SREBF1 Macaca mulatta ENSMMUG00000023375 I
SREBF1 Monodelphis domestica ENSMODG00000014074 I
SREBF2 Monodelphis domestica ENSMODG00000016612 I
ENSMPUG00000000024 Mustela putorius furo ENSMPUG00000000024 I
ENSMPUG00000016372 Mustela putorius furo ENSMPUG00000016372 I
Srebf1 Mus musculus ENSMUSG00000020538 D
Srebf2 Mus musculus ENSMUSG00000022463 D
ENSNLEG00000013625 Nomascus leucogenys ENSNLEG00000013625 I
SREBF1 Ornithorhynchus anatinus ENSOANG00000012278 I
ENSOARG00000001504 Ovis aries ENSOARG00000001504 I
ENSOARG00000018717 Ovis aries ENSOARG00000018717 I
SREBF2 Oryctolagus cuniculus ENSOCUG00000003178 I
SREBF1 Otolemur garnettii ENSOGAG00000002910 I
SREBF2 Otolemur garnettii ENSOGAG00000014736 I
ENSONIG00000002304 Oreochromis niloticus ENSONIG00000002304 I
ENSONIG00000008375 Oreochromis niloticus ENSONIG00000008375 I
SREBF1 Ochotona princeps ENSOPRG00000015069 I
srebf1 Oryzias latipes ENSORLG00000009437 I
srebf2 Oryzias latipes ENSORLG00000014672 I
ENSP00000348069 Macaca fascicularis ENSP00000348069 I
ENSP00000354476 Macaca fascicularis ENSP00000354476 I
ENSPANG00000008691 Papio anubis ENSPANG00000008691 I
ENSPANG00000023675 Papio anubis ENSPANG00000023675 I
SREBF2 Procavia capensis ENSPCAG00000006497 I
SREBF1 Procavia capensis ENSPCAG00000014903 I
ENSPFOG00000000475 Poecilia formosa ENSPFOG00000000475 I
ENSPFOG00000010306 Poecilia formosa ENSPFOG00000010306 I
ENSPMAG00000001400 Petromyzon marinus ENSPMAG00000001400 I
ENSPPYG00000008037 Pongo abelii ENSPPYG00000008037 I
ENSPPYG00000011880 Pongo abelii ENSPPYG00000011880 I
ENSPSIG00000014746 Pelodiscus sinensis ENSPSIG00000014746 I
SREBF2 Pan troglodytes ENSPTRG00000014439 I
SREBF2 Pteropus vampyrus ENSPVAG00000001177 I
SREBF1 Pteropus vampyrus ENSPVAG00000005765 I
Srebf1 Rattus norvegicus ENSRNOG00000003463 I
Srebf2 Rattus norvegicus ENSRNOG00000007400 I
ENSSARG00000006597 Sorex araneus ENSSARG00000006597 I
ENSSHAG00000011682 Sarcophilus harrisii ENSSHAG00000011682 I
ENSSHAG00000018607 Sarcophilus harrisii ENSSHAG00000018607 I
ENSSSCG00000023124 Sus scrofa ENSSSCG00000023124 I
SREBF2 Sus scrofa ENSSSCG00000026092 I
ENSSTOG00000012916 Ictidomys tridecemlineatus ENSSTOG00000012916 I
ENSSTOG00000014939 Ictidomys tridecemlineatus ENSSTOG00000014939 I
SREBF2 Tupaia belangeri ENSTBEG00000016542 I
SREBF1 Taeniopygia guttata ENSTGUG00000007313 I
ENSTGUG00000009772 Taeniopygia guttata ENSTGUG00000009772 I
srebf2 Tetraodon nigroviridis ENSTNIG00000010835 I
srebf1 Tetraodon nigroviridis ENSTNIG00000011957 I
srebf2 Takifugu rubripes ENSTRUG00000007413 I
SREBF2 Tursiops truncatus ENSTTRG00000017350 I
ENSXMAG00000003080 Xiphophorus maculatus ENSXMAG00000003080 I
ENSXMAG00000014774 Xiphophorus maculatus ENSXMAG00000014774 I
SREBP Drosophila pseudoobscura FBgn0081122 I
SREBP Drosophila ananassae FBgn0100584 I
SREBP Drosophila erecta FBgn0108291 I
SREBP Drosophila grimshawi FBgn0122129 I
SREBP Drosophila persimilis FBgn0153336 I
SREBP Drosophila sechellia FBgn0174544 I
SREBP Drosophila simulans FBgn0186498 I
SREBP Drosophila virilis FBgn0198580 I
SREBP Drosophila willistoni FBgn0219495 I
SREBP Drosophila yakuba FBgn0236960 I
HLH106 Drosophila melanogaster FBgn0261283 D
Gfo_R004756 Geospiza fortis Gfo_R004756 I
Gfo_R006283 Geospiza fortis Gfo_R006283 I
HHAL003331-PA Halyomorpha halys HHAL003331-PA I
LotgiG224211 Lottia gigantea LotgiG224211 I
Myotis_brandtii_SREBF1_10023215 Myotis brandtii Myotis_brandtii_SREBF1_10023215 I
Myotis_brandtii_SREBF2_10014539 Myotis brandtii Myotis_brandtii_SREBF2_10014539 I
NV10553 Nasonia vitripennis NV10553 I
Ogr11708 Ophisaurus gracilis Ogr11708 I
Ogr14454 Ophisaurus gracilis Ogr14454 I
Pvit_05020 Pogona vitticeps Pvit_05020 I
Pvit_18605 Pogona vitticeps Pvit_18605 I
RPRC014734 Rhodnius prolixus RPRC014734 I
Sakowv30028178m.g Saccoglossus kowalevskii Sakowv30028178m.g I
Tal_R010023 Tyto alba Tal_R010023 I
TC007163 Tribolium castaneum TC007163 I
tetur08g03870 Tetranychus urticae tetur08g03870 I
srebf2 Xenopus tropicalis XB-GENE-1011360 I
srebf2.L Xenopus laevis XB-GENE-1011364 I
srebf1 Xenopus tropicalis XB-GENE-987572 I
XP_002944649 Xenopus tropicalis XP_002944649 I
YQE_07365 Dendroctonus ponderosae YQE_07365 I