ACOM032190 (Anopheles coluzzii)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00907 (T-box) IPR001699 ACOM032190 T341373_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
byn
M03984_2.00 		Drosophila melanogaster
ABGTGYGADDD
HHHTCRCACVT		 SELEX
Nitta et al.(2015)
byn_1 		0.876 0.866
byn
M03985_2.00 		Drosophila melanogaster
DNGTGYBAHWWDTVRCACNH
DNGTGYBAHWWDTVRCACNH		 SELEX
Nitta et al.(2015)
byn_2 		0.876 0.866
byn
M03986_2.00 		Drosophila melanogaster
RDGTGYGADNDNDNNNNNNDRDGTGYGADD
HHTCRCACHYHNNNNNNHNHNHTCRCACHY		 SELEX
Nitta et al.(2015)
byn_3 		0.876 0.866
byn
M03987_2.00 		Drosophila melanogaster
NNTMRCAYNWWNRTGYKAHN
NDTMRCAYNWWNRTGYKANN		 SELEX
Nitta et al.(2015)
byn_4 		0.876 0.866
byn
M06453_2.00 		Drosophila melanogaster
ADGTGCDA
THGCACHT		 B1H
Zhu et al.(2011)
byn_FlyReg_FBgn0011723 		0.876 0.866
T
M05809_2.00 		Homo sapiens
NANGTGYGAHWWNTVRCACCTN
NAGGTGYBANWWDTCRCACNTN		 SELEX
Yin et al.(2017)
T_eDBD_HT-SELEX_1 		0.804 0.710
T
M05810_2.00 		Homo sapiens
DTCRCAYVTABGTGYGAH
DTCRCACVTABRTGYGAH		 SELEX
Yin et al.(2017)
T_eDBD_HT-SELEX_2 		0.804 0.710
T
M09427_2.00 		Homo sapiens
BYNVCANNNVDGTGWKARDN
NHYTMWCACHBNNNTGBNRV		 Misc
Kulakovskiy et al.(2013)
BRAC_HUMAN.H11MO.0.A 		0.804 0.710
T
M09431_2.00 		Mus musculus
VVNRAWTTSACASNYHDVTGBNMAN
NTKNVCABHDRNSTGTSAAWTYNBB		 Misc
Kulakovskiy et al.(2013)
BRAC_MOUSE.H11MO.0.B 		0.804 0.710
T
M09651_2.00 		Mus musculus
NYTVDCASNNNNSTGHBARNN
NNYTVDCASNNNNSTGHBARN		 Misc
Heinz et al.(2010)
Mesoendoderm-Brachyury_GSE54963 		0.804 0.710
T
M11384_2.00 		Homo sapiens
MKHBTSACACSTAGGTGTGAAATK
MATTTCACACCTASGTGTSAVDMK		 Transfac
Matys et al.(2006)
V$BRACH_01 		0.804 0.710
T
M05811_2.00 		Homo sapiens
NABGTGYGAHWWNTVRCACSTN
NASGTGYBANWWDTCRCACVTN		 SELEX
Yin et al.(2017)
T_eDBD_Methyl-HT-SELEX_1 		0.804 0.710
T
M05812_2.00 		Homo sapiens
DTMRCAYVTABGTGYKAH
DTMRCACVTABRTGYKAH		 SELEX
Yin et al.(2017)
T_eDBD_Methyl-HT-SELEX_2 		0.804 0.710
TBX19
M03562_2.00 		Homo sapiens
NDTVRCACVTANGTGYKANN
NNTMRCACNTABGTGYBAHN		 SELEX
Jolma et al.(2013)
TBX19_1 		0.799 0.698
TBX19
M05803_2.00 		Homo sapiens
NAGGTGYBAHWDTMRCACNTN
NANGTGYKAHWDTVRCACCTN		 SELEX
Yin et al.(2017)
TBX19_eDBD_HT-SELEX 		0.799 0.698
TBX19
M05804_2.00 		Homo sapiens
NANGTGYKAHWDTVRCACSTN
NASGTGYBAHWDTMRCACNTN		 SELEX
Yin et al.(2017)
TBX19_eDBD_Methyl-HT-SELEX 		0.799 0.698
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACOM032190-PA T-box 74 252

Links

Other T-box family TFs
Other Anopheles coluzzii TFs

162 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28226.m000839 Ricinus communis 28226.m000839 I 0.000
AMTR_s00024p00224180 Amborella trichopoda AMTR_s00024p00224180 I 0.000
AMTR_s00024p00224470 Amborella trichopoda AMTR_s00024p00224470 I 0.000
AMTR_s00024p00224850 Amborella trichopoda AMTR_s00024p00224850 I 0.000
Aquca_009_00493 Aquilegia coerulea Aquca_009_00493 I 0.000
Aquca_076_00099 Aquilegia coerulea Aquca_076_00099 I 0.000
TT2 Arabidopsis thaliana AT5G35550 I 0.000
Bo8g030520 Brassica oleracea Bo8g030520 I 0.000
Bostr.29044s0068 Boechera stricta Bostr.29044s0068 I 0.000
Bra035532 Brassica rapa Bra035532 I 0.000
Cagra.5428s0005 Capsella grandiflora Cagra.5428s0005 I 0.000
Carubv10006684m.g Capsella rubella Carubv10006684m.g I 0.000
cassava2758.m1 Manihot esculenta cassava2758.m1 I 0.000
cassava28702.m1 Manihot esculenta cassava28702.m1 I 0.000
cassava36364.valid.m1 Manihot esculenta cassava36364.valid.m1 I 0.000
cassava36365.valid.m1 Manihot esculenta cassava36365.valid.m1 I 0.000
cassava7672.valid.m1 Manihot esculenta cassava7672.valid.m1 I 0.000
Ca_03154 Cicer arietinum Ca_03154 I 0.000
Ciclev10009286m.g Citrus clementina Ciclev10009286m.g I 0.000
brachyury Ciona intestinalis ENSCING00000000810 I 0.744
ENSCSAVG00000002247 Ciona savignyi ENSCSAVG00000002247 I 0.749
tbx19 Danio rerio ENSDARG00000079187 I 0.744
tb Gasterosteus aculeatus ENSGACG00000005258 I 0.749
ENSGMOG00000017391 Gadus morhua ENSGMOG00000017391 I 0.744
ENSLACG00000011042 Latimeria chalumnae ENSLACG00000011042 I 0.748
ENSLOCG00000010586 Lepisosteus oculatus ENSLOCG00000010586 I 0.769
T Oryctolagus cuniculus ENSOCUG00000000660 I 0.763
ENSPFOG00000006034 Poecilia formosa ENSPFOG00000006034 I 0.760
tbx19 Tetraodon nigroviridis ENSTNIG00000006586 I 0.768
tb Tetraodon nigroviridis ENSTNIG00000016613 I 0.741
tbx19 Takifugu rubripes ENSTRUG00000005718 I 0.764
tb Takifugu rubripes ENSTRUG00000011958 I 0.749
ENSXMAG00000006226 Xiphophorus maculatus ENSXMAG00000006226 I 0.759
estExt_fgenesh2_pg.C_650149 Branchiostoma floridae estExt_fgenesh2_pg.C_650149 I 0.763
estExt_gwp.C_9340008 Branchiostoma floridae estExt_gwp.C_9340008 I 0.763
Eucgr.C00721 Eucalyptus grandis Eucgr.C00721 I 0.000
Eucgr.C00722 Eucalyptus grandis Eucgr.C00722 I 0.000
Eucgr.C00723 Eucalyptus grandis Eucgr.C00723 I 0.000
Eucgr.C00724 Eucalyptus grandis Eucgr.C00724 I 0.000
Eucgr.C00826 Eucalyptus grandis Eucgr.C00826 I 0.000
Eucgr.C02096 Eucalyptus grandis Eucgr.C02096 I 0.000
Eucgr.C03151 Eucalyptus grandis Eucgr.C03151 I 0.000
Eucgr.C03554 Eucalyptus grandis Eucgr.C03554 I 0.000
Eucgr.C03555 Eucalyptus grandis Eucgr.C03555 I 0.000
Eucgr.F03176 Eucalyptus grandis Eucgr.F03176 I 0.000
Eucgr.J02816 Eucalyptus grandis Eucgr.J02816 I 0.000
Eucgr.J02817 Eucalyptus grandis Eucgr.J02817 I 0.000
Eucgr.J02819 Eucalyptus grandis Eucgr.J02819 N 0.000
Eucgr.K01504 Eucalyptus grandis Eucgr.K01504 I 0.000
evm.TU.supercontig_126.33 Carica papaya evm.TU.supercontig_126.33 I 0.000
evm.TU.supercontig_28.71 Carica papaya evm.TU.supercontig_28.71 I 0.000
TT2 Arabidopsis lyrata fgenesh2_kg.7__3049__AT5G35550.1 I 0.000
gene07416-v1.0-hybrid Fragaria vesca gene07416-v1.0-hybrid I 0.000
gene08694-v1.0-hybrid Fragaria vesca gene08694-v1.0-hybrid I 0.000
gene15390-v1.0-hybrid Fragaria vesca gene15390-v1.0-hybrid I 0.000
gene15392-v1.0-hybrid Fragaria vesca gene15392-v1.0-hybrid I 0.000
GLYMA07G04210 Glycine max GLYMA07G04210 I 0.000
GLYMA07G04240 Glycine max GLYMA07G04240 I 0.000
GLYMA10G35050 Glycine max GLYMA10G35050 I 0.000
GLYMA10G35061 Glycine max GLYMA10G35061 I 0.000
GLYMA13G16890 Glycine max GLYMA13G16890 I 0.000
GLYMA16G00920 Glycine max GLYMA16G00920 I 0.000
GLYMA16G00931 Glycine max GLYMA16G00931 I 0.000
GLYMA17G05831 Glycine max GLYMA17G05831 I 0.000
GLYMA20G32500 Glycine max GLYMA20G32500 I 0.000
Gorai.001G015200 Gossypium raimondii Gorai.001G015200 I 0.000
Gorai.001G020400 Gossypium raimondii Gorai.001G020400 I 0.000
Gorai.001G020500 Gossypium raimondii Gorai.001G020500 N 0.000
Gorai.001G020600 Gossypium raimondii Gorai.001G020600 I 0.000
Gorai.003G021100 Gossypium raimondii Gorai.003G021100 I 0.000
Gorai.004G044000 Gossypium raimondii Gorai.004G044000 I 0.000
Gorai.010G087200 Gossypium raimondii Gorai.010G087200 I 0.000
GRMZM2G701063 Zea mays GRMZM2G701063 I 0.000
GSMUA_Achr3G07940_001 Musa acuminata GSMUA_Achr3G07940_001 I 0.000
GSMUA_Achr3G07950_001 Musa acuminata GSMUA_Achr3G07950_001 I 0.000
GSMUA_Achr6G04400_001 Musa acuminata GSMUA_Achr6G04400_001 I 0.000
GSMUA_Achr7G18560_001 Musa acuminata GSMUA_Achr7G18560_001 I 0.000
GSMUA_Achr8G22690_001 Musa acuminata GSMUA_Achr8G22690_001 I 0.000
GSMUA_Achr9G16040_001 Musa acuminata GSMUA_Achr9G16040_001 I 0.000
LjSGA_029658.1 Lotus japonicus LjSGA_029658.1 I 0.000
LjT02E24.110.nc Lotus japonicus LjT02E24.110.nc I 0.000
LjT02E24.130.nc Lotus japonicus LjT02E24.130.nc I 0.000
LjT02E24.60.nc Lotus japonicus LjT02E24.60.nc I 0.000
Lus10000470.g Linum usitatissimum Lus10000470.g I 0.000
Lus10033438.g Linum usitatissimum Lus10033438.g I 0.000
MDP0000031172 Malus domestica MDP0000031172 I 0.000
MDP0000140609 Malus domestica MDP0000140609 I 0.000
MDP0000184538 Malus domestica MDP0000184538 I 0.000
MDP0000210851 Malus domestica MDP0000210851 I 0.000
MDP0000318013 Malus domestica MDP0000318013 I 0.000
MDP0000437717 Malus domestica MDP0000437717 I 0.000
MDP0000887107 Malus domestica MDP0000887107 I 0.000
mgf006108m Mimulus guttatus mgf006108m I 0.000
MTR_3g097450 Medicago truncatula MTR_3g097450 I 0.000
MTR_4g125520 Medicago truncatula MTR_4g125520 I 0.000
MTR_8g020490 Medicago truncatula MTR_8g020490 I 0.000
OB03G30160 Oryza brachyantha OB03G30160 I 0.000
OB06G16110 Oryza brachyantha OB06G16110 I 0.000
orange1.1g025602m.g Citrus sinensis orange1.1g025602m.g I 0.000
orange1.1g036215m.g Citrus sinensis orange1.1g036215m.g I 0.000
ORGLA03G0196700 Oryza glaberrima ORGLA03G0196700 I 0.000
ORGLA06G0059500 Oryza glaberrima ORGLA06G0059500 I 0.000
ORUFI06G06900 Oryza rufipogon ORUFI06G06900 I 0.000
Pavir.Db02046 Panicum virgatum Pavir.Db02046 I 0.000
PDK_20s1554342g001 Phoenix dactylifera PDK_20s1554342g001 I 0.000
PDK_20s1716541g001 Phoenix dactylifera PDK_20s1716541g001 I 0.000
PDK_20s1918041g001 Phoenix dactylifera PDK_20s1918041g001 I 0.000
PK16315.1 Cannabis sativa PK16315.1 I 0.000
Pm005570 Prunus mume Pm005570 I 0.000
Pm005571 Prunus mume Pm005571 I 0.000
Pm005572 Prunus mume Pm005572 I 0.000
Pm013279 Prunus mume Pm013279 I 0.000
Pm027045 Prunus mume Pm027045 I 0.000
Pm027047 Prunus mume Pm027047 I 0.000
Pm027048 Prunus mume Pm027048 I 0.000
Pm029489 Prunus mume Pm029489 I 0.000
POPTR_0006s23810 Populus trichocarpa POPTR_0006s23810 I 0.000
POPTR_0006s23840 Populus trichocarpa POPTR_0006s23840 I 0.000
POPTR_0006s29080 Populus trichocarpa POPTR_0006s29080 I 0.000
POPTR_0013s05310 Populus trichocarpa POPTR_0013s05310 I 0.000
POPTR_0018s03770 Populus trichocarpa POPTR_0018s03770 I 0.000
POPTR_0018s05530 Populus trichocarpa POPTR_0018s05530 I 0.000
PRUPE_ppa010252mg Prunus persica PRUPE_ppa010252mg I 0.000
PRUPE_ppa017136mg Prunus persica PRUPE_ppa017136mg I 0.000
PRUPE_ppa019380mg Prunus persica PRUPE_ppa019380mg I 0.000
PRUPE_ppa022205mg Prunus persica PRUPE_ppa022205mg I 0.000
PRUPE_ppa023768mg Prunus persica PRUPE_ppa023768mg I 0.000
PRUPE_ppa023789mg Prunus persica PRUPE_ppa023789mg I 0.000
PRUPE_ppa023812mg Prunus persica PRUPE_ppa023812mg I 0.000
PRUPE_ppa024074mg Prunus persica PRUPE_ppa024074mg I 0.000
Q2TCH0_PETHY Petunia x hybrida Q2TCH0_PETHY D 0.000
SapurV1A.0263s0400 Salix purpurea SapurV1A.0263s0400 I 0.000
SapurV1A.0710s0050 Salix purpurea SapurV1A.0710s0050 I 0.000
SapurV1A.0710s0070 Salix purpurea SapurV1A.0710s0070 I 0.000
SapurV1A.1276s0060 Salix purpurea SapurV1A.1276s0060 I 0.000
Sb01g032770 Sorghum bicolor Sb01g032770 I 0.000
Sb10g006700 Sorghum bicolor Sb10g006700 I 0.000
Si038905m.g Setaria italica Si038905m.g I 0.000
SNAPOd2T00000418001 Oikopleura dioica SNAPOd2T00000418001 I 0.754
Solyc12g049300.1 Solanum lycopersicum Solyc12g049300.1 I 0.000
TCM_000535 Theobroma cacao TCM_000535 I 0.000
TCM_004509 Theobroma cacao TCM_004509 I 0.000
TCM_010778 Theobroma cacao TCM_010778 I 0.000
TCM_029121 Theobroma cacao TCM_029121 I 0.000
TCM_037376 Theobroma cacao TCM_037376 I 0.000
TCM_037377 Theobroma cacao TCM_037377 I 0.000
TCM_037379 Theobroma cacao TCM_037379 I 0.000
TCM_037555 Theobroma cacao TCM_037555 I 0.000
TCM_037559 Theobroma cacao TCM_037559 I 0.000
Thhalv10003461m.g Eutrema salsugineum Thhalv10003461m.g I 0.000
VIT_04s0008g01800 Vitis vinifera VIT_04s0008g01800 I 0.000
VIT_04s0008g01810 Vitis vinifera VIT_04s0008g01810 I 0.000
VIT_04s0008g01820 Vitis vinifera VIT_04s0008g01820 I 0.000
VIT_04s0008g01830 Vitis vinifera VIT_04s0008g01830 N 0.000
VIT_04s0008g01840 Vitis vinifera VIT_04s0008g01840 I 0.000
VIT_09s0002g01400 Vitis vinifera VIT_09s0002g01400 I 0.000
VIT_09s0002g01410 Vitis vinifera VIT_09s0002g01410 I 0.000
VIT_11s0016g01300 Vitis vinifera VIT_11s0016g01300 I 0.000
VIT_11s0016g01310 Vitis vinifera VIT_11s0016g01310 I 0.000
VIT_11s0016g01320 Vitis vinifera VIT_11s0016g01320 I 0.000
VIT_13s0084g00530 Vitis vinifera VIT_13s0084g00530 I 0.000
XP_002164912.1 Hydra magnipapillata XP_002164912.1 I 0.762