CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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F443_17630
(
Phytophthora parasitica
)
TBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00352 (TBP)
IPR000814
F443_17630
T342463_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ETI36189
TBP
19
101
QLHIKNFVCSANLGMRFDLTNLLVKSHRRAELVPKKNCILMKLHNPKATAMLFANGKLVCTGAETEEAIKNVARRFTQVIQKM
ETI36189
TBP
110
193
DFKIQNVVGTCDLGFRVLVEALAFAHSDRCTYEPELYPALIYRLEKPQVKVLVFVSGKVVFTDSKEPRELYAACEAIFPILSQF
Links
Other
TBP
family TFs
Other
Phytophthora parasitica
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ALNC14_065670
Albugo laibachii
ALNC14_065670
N
0.713
estExt_fgenesh1_pg.C_110148
Phytophthora capsici
estExt_fgenesh1_pg.C_110148
N
0.982
fgenesh_scip_prom.28083.6999
Phytophthora lateralis
fgenesh_scip_prom.28083.6999
N
0.940
HpaG807837
Hyaloperonospora arabidopsidis
HpaG807837
N
0.874
maker-pag1_scaffold_59-fgenesh-gene-0.7
Pythium aphanidermatum
maker-pag1_scaffold_59-fgenesh-gene-0.7
N
0.707
maker-pir_contig_233-fgenesh-gene-0.3
Pythium irregulare
maker-pir_contig_233-fgenesh-gene-0.3
N
0.838
maker-piw_contig_55-fgenesh-gene-0.12
Pythium iwayamai
maker-piw_contig_55-fgenesh-gene-0.12
N
0.795
maker-pve_contig_691-snap-gene-0.13
Pythium vexans
maker-pve_contig_691-snap-gene-0.13
N
0.760
Phyra84970
Phytophthora ramorum
Phyra84970
N
0.964
Physo129327
Phytophthora sojae
Physo129327
N
0.957
PITG_12304
Phytophthora infestans
PITG_12304
N
0.947
PYU1_G010143
Pythium ultimum
PYU1_G010143
N
0.814