OBART03G28150 (Oryza barthii)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 OBART03G28150 T342753_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.862 0.862
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.862 0.862
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.862 0.862
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.838 0.838
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.838 0.838
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.838 0.838
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.838 0.838
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.838 0.838
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.838 0.838
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.838 0.838
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.838 0.838
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.838 0.838
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.838 0.838
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART03G28150.1 TBP 25 107
OBART03G28150.1 TBP 115 198
OBART03G28150.2 TBP 25 107
OBART03G28150.2 TBP 115 198

Links

Other TBP family TFs
Other Oryza barthii TFs

766 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
THAP11 Anolis carolinensis ENSACAG00000001520 I 0.000
ENSAMEG00000017547 Ailuropoda melanoleuca ENSAMEG00000017547 I 0.000
ENSAMXG00000025848 Astyanax mexicanus ENSAMXG00000025848 I 0.000
THAP11 Bos taurus ENSBTAG00000006411 I 0.000
ENSBTAP00000008406-D1 Bos grunniens ENSBTAP00000008406-D1 I 0.000
THAP11 Canis familiaris ENSCAFG00000020344 I 0.000
THAP11 Choloepus hoffmanni ENSCHOG00000008297 I 0.000
THAP11 Cavia porcellus ENSCPOG00000001016 I 0.000
ENSCSAG00000018473 Chlorocebus sabaeus ENSCSAG00000018473 I 0.000
thap11 Danio rerio ENSDARG00000036055 I 0.000
THAP11 Dasypus novemcinctus ENSDNOG00000009718 I 0.000
ENSFALG00000007023 Ficedula albicollis ENSFALG00000007023 I 0.000
THAP11 Felis catus ENSFCAG00000012850 I 0.000
THAP11 Homo sapiens ENSG00000168286 D 0.000
thap11 Gasterosteus aculeatus ENSGACG00000015879 I 0.000
THAP11 Gorilla gorilla ENSGGOG00000013846 I 0.000
ENSLACG00000016376 Latimeria chalumnae ENSLACG00000016376 I 0.000
ENSLOCG00000017596 Lepisosteus oculatus ENSLOCG00000017596 I 0.000
THAP11 Microcebus murinus ENSMICG00000012247 I 0.000
THAP11 Myotis lucifugus ENSMLUG00000005845 I 0.000
THAP11 Macaca mulatta ENSMMUG00000013240 I 0.000
THAP11 Monodelphis domestica ENSMODG00000005522 I 0.000
ENSMPUG00000019895 Mustela putorius furo ENSMPUG00000019895 I 0.000
Thap11 Mus musculus ENSMUSG00000036442 D 0.000
THAP11 Ornithorhynchus anatinus ENSOANG00000006140 I 0.000
ENSOARG00000010537 Ovis aries ENSOARG00000010537 I 0.000
THAP11 Oryctolagus cuniculus ENSOCUG00000009342 I 0.000
THAP11 Otolemur garnettii ENSOGAG00000034339 I 0.000
ENSONIG00000021394 Oreochromis niloticus ENSONIG00000021394 I 0.000
thap11 Oryzias latipes ENSORLG00000008903 I 0.000
ENSPANG00000011972 Papio anubis ENSPANG00000011972 I 0.000
ENSPFOG00000020599 Poecilia formosa ENSPFOG00000020599 I 0.000
THAP11 Pan troglodytes ENSPTRG00000008247 I 0.000
THAP11 Pteropus vampyrus ENSPVAG00000016604 I 0.000
Thap11 Rattus norvegicus ENSRNOG00000019109 I 0.000
THAP11 Sorex araneus ENSSARG00000013268 I 0.000
THAP11 Sus scrofa ENSSSCG00000002769 I 0.000
ENSSTOG00000021807 Ictidomys tridecemlineatus ENSSTOG00000021807 I 0.000
thap11 Tetraodon nigroviridis ENSTNIG00000009306 I 0.000
ENSXMAG00000019795 Xiphophorus maculatus ENSXMAG00000019795 I 0.000
Myotis_brandtii_Thap11_10015084 Myotis brandtii Myotis_brandtii_Thap11_10015084 I 0.000
Pvit_14747 Pogona vitticeps Pvit_14747 I 0.000
thap11 Xenopus tropicalis XB-GENE-5954792 I 0.000
thap11.L Xenopus laevis XB-GENE-5954813 I 0.000