SCHCODRAFT_81516 (Schizophyllum commune)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 SCHCODRAFT_81516 T342878_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.886 0.886
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.886 0.886
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.886 0.886
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.814 0.814
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.814 0.814
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.814 0.814
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.814 0.814
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.814 0.814
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.814 0.814
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.814 0.814
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.814 0.814
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.814 0.814
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.814 0.814
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ01317 TBP 110 192
EFJ01317 TBP 200 283

Links

Other TBP family TFs
Other Schizophyllum commune TFs

760 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29814.m000736 Ricinus communis 29814.m000736 I 0.000
AC213884.3_FG002 Zea mays AC213884.3_FG002 N 0.000
MYB25 Arabidopsis lyrata Al_scaffold_0004_2572 I 0.000
Aquca_007_00776 Aquilegia coerulea Aquca_007_00776 I 0.000
Aquca_045_00169 Aquilegia coerulea Aquca_045_00169 I 0.000
Aquca_083_00054 Aquilegia coerulea Aquca_083_00054 I 0.000
F3A4.140 Arabidopsis thaliana AT3G50060 D 0.000
MYB44 Arabidopsis thaliana AT5G67300 D 0.000
BGIOSGA018238 Oryza indica BGIOSGA018238 I 0.000
BGIOSGA018239 Oryza indica BGIOSGA018239 I 0.000
Bo2g167960 Brassica oleracea Bo2g167960 I 0.000
Bo7g063830 Brassica oleracea Bo7g063830 I 0.000
Bo7g099180 Brassica oleracea Bo7g099180 I 0.000
Bo8g079430 Brassica oleracea Bo8g079430 I 0.000
Bostr.0568s0154 Boechera stricta Bostr.0568s0154 I 0.000
Bostr.6864s0236 Boechera stricta Bostr.6864s0236 I 0.000
Bra012149 Brassica rapa Bra012149 I 0.000
Bra012910 Brassica rapa Bra012910 I 0.000
Bra036048 Brassica rapa Bra036048 I 0.000
BRADI2G28910 Brachypodium distachyon BRADI2G28910 N 0.000
Cagra.0342s0017 Capsella grandiflora Cagra.0342s0017 I 0.000
Cagra.1549s0005 Capsella grandiflora Cagra.1549s0005 I 0.000
Carubv10019440m.g Capsella rubella Carubv10019440m.g I 0.000
Carubv10027659m.g Capsella rubella Carubv10027659m.g I 0.000
cassava41257.m1 Manihot esculenta cassava41257.m1 I 0.000
cassava47374.m1 Manihot esculenta cassava47374.m1 I 0.000
Ca_12468 Cicer arietinum Ca_12468 I 0.000
chr2.CM0002.110.nc Lotus japonicus chr2.CM0002.110.nc I 0.000
Cla004431 Citrullus lanatus Cla004431 I 0.000
Cla020946 Citrullus lanatus Cla020946 I 0.000
Cla022947 Citrullus lanatus Cla022947 I 0.000
CM0528.210.nd Lotus japonicus CM0528.210.nd I 0.000
Cucsa.368410 Cucumis sativus Cucsa.368410 I 0.000
Cucsa.395890 Cucumis sativus Cucsa.395890 I 0.000
Eucgr.E02958 Eucalyptus grandis Eucgr.E02958 I 0.000
Eucgr.F00002 Eucalyptus grandis Eucgr.F00002 I 0.000
MYB77 Arabidopsis lyrata fgenesh2_kg.5__1356__AT3G50060.1 I 0.000
gene21001-v1.0-hybrid Fragaria vesca gene21001-v1.0-hybrid I 0.000
GLYMA05G21220 Glycine max GLYMA05G21220 I 0.000
GLYMA14G09540 Glycine max GLYMA14G09540 I 0.000
GLYMA17G35620 Glycine max GLYMA17G35620 I 0.000
Gorai.002G009300 Gossypium raimondii Gorai.002G009300 I 0.000
Gorai.005G234900 Gossypium raimondii Gorai.005G234900 I 0.000
Gorai.010G023500 Gossypium raimondii Gorai.010G023500 I 0.000
Gorai.012G149000 Gossypium raimondii Gorai.012G149000 I 0.000
GRMZM2G145444 Zea mays GRMZM2G145444 I 0.000
GRMZM2G369799 Zea mays GRMZM2G369799 I 0.000
GSMUA_Achr1G26140_001 Musa acuminata GSMUA_Achr1G26140_001 I 0.000
GSMUA_Achr3G13070_001 Musa acuminata GSMUA_Achr3G13070_001 I 0.000
GSMUA_Achr3G28230_001 Musa acuminata GSMUA_Achr3G28230_001 I 0.000
GSMUA_Achr4G09450_001 Musa acuminata GSMUA_Achr4G09450_001 I 0.000
GSMUA_Achr4G20150_001 Musa acuminata GSMUA_Achr4G20150_001 I 0.000
GSMUA_Achr9G22600_001 Musa acuminata GSMUA_Achr9G22600_001 I 0.000
GSMUA_AchrUn_randomG01280_001 Musa acuminata GSMUA_AchrUn_randomG01280_001 I 0.000
LPERR02G05810 Leersia perrieri LPERR02G05810 I 0.000
LPERR05G10150 Leersia perrieri LPERR05G10150 I 0.000
Lus10007503.g Linum usitatissimum Lus10007503.g I 0.000
Lus10010238.g Linum usitatissimum Lus10010238.g I 0.000
Lus10014103.g Linum usitatissimum Lus10014103.g I 0.000
Lus10028979.g Linum usitatissimum Lus10028979.g I 0.000
Lus10040940.g Linum usitatissimum Lus10040940.g I 0.000
MDP0000187872 Malus domestica MDP0000187872 I 0.000
mgf014089m Mimulus guttatus mgf014089m I 0.000
mgf020432m Mimulus guttatus mgf020432m I 0.000
mgf023922m Mimulus guttatus mgf023922m I 0.000
MLOC_26177 Hordeum vulgare MLOC_26177 N 0.000
MTR_4g094982 Medicago truncatula MTR_4g094982 I 0.000
OGLUM05G13590 Oryza glumaepatula OGLUM05G13590 I 0.000
ONIVA05G13470 Oryza nivara ONIVA05G13470 I 0.000
OPUNC05G11020 Oryza punctata OPUNC05G11020 I 0.000
ORGLA05G0109400 Oryza glaberrima ORGLA05G0109400 I 0.000
ORUFI05G13850 Oryza rufipogon ORUFI05G13850 I 0.000
Pavir.Ab00649 Panicum virgatum Pavir.Ab00649 I 0.000
Pavir.Ca02945 Panicum virgatum Pavir.Ca02945 I 0.000
Pavir.Cb00156 Panicum virgatum Pavir.Cb00156 I 0.000
Pavir.J23512 Panicum virgatum Pavir.J23512 I 0.000
Pavir.J33236 Panicum virgatum Pavir.J33236 I 0.000
PGSC0003DMG400003316 Solanum tuberosum PGSC0003DMG400003316 I 0.000
PK17282.1 Cannabis sativa PK17282.1 I 0.000
POPTR_0005s18620 Populus trichocarpa POPTR_0005s18620 I 0.000
POPTR_0008s07100 Populus trichocarpa POPTR_0008s07100 I 0.000
POPTR_0009s09890 Populus trichocarpa POPTR_0009s09890 I 0.000
SapurV1A.0650s0070 Salix purpurea SapurV1A.0650s0070 I 0.000
Sb04g005940 Sorghum bicolor Sb04g005940 I 0.000
Sb09g016570 Sorghum bicolor Sb09g016570 I 0.000
ATMYBR1 Arabidopsis lyrata scaffold_803378.1 I 0.000
Si017917m.g Setaria italica Si017917m.g I 0.000
Si024344m.g Setaria italica Si024344m.g I 0.000
Solyc04g078420.1 Solanum lycopersicum Solyc04g078420.1 I 0.000
TCM_007138 Theobroma cacao TCM_007138 I 0.000
TCM_042474 Theobroma cacao TCM_042474 I 0.000
Thhalv10004676m.g Eutrema salsugineum Thhalv10004676m.g I 0.000
Thhalv10010581m.g Eutrema salsugineum Thhalv10010581m.g I 0.000
VIT_13s0067g01360 Vitis vinifera VIT_13s0067g01360 I 0.000