CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr10G09730_001
(
Musa acuminata
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03634 (TCP)
IPR005333
GSMUA_Achr10G09730_001
T343947_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr10P09730_001
TCP
27
90
GRGGRVRANSNSSSGTSSSRSTSEHHQPQHHFGHHHHQQQKQQGNSSIPSSLELVPLKNRAGPS
GSMUA_Achr10P09730_001
TCP
149
175
RSSKDRHTKVDGRGRRIRMPAICAARQ
GSMUA_Achr10P09730_001
TCP
173
320
ARQAEPAIIATTGTGTIPANFSTLNISLRSSGSSLSAPPSKSAPLSFHALALAHHRPDFEQVTDPGMSHAAAMLGLQGGGSSGGGDSADTYLRKRFREDLFKDEQPEGSGGAGPSSPSSASKSMRAGSGLQLHQRSQQQEAAAAAAAA
Links
Other
TCP
family TFs
Other
Musa acuminata
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCP8
Arabidopsis thaliana
AT1G58100
D
0.831
Bra018126
Brassica rapa
Bra018126
N
0.904
Carubv10010909m.g
Capsella rubella
Carubv10010909m.g
N
0.844
ORUFI02G26600
Oryza rufipogon
ORUFI02G26600
N
0.855
Sb08g004610
Sorghum bicolor
Sb08g004610
N
0.867