TB1 (Oryza sativa)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 OS03G0706500 T344233_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TB1
M01312_2.00		 Oryza sativa
GGSCCCCCYM
KRGGGGGSCC		 PBM
Lambert et al.(2019)
pTH8740		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK12240.1
M01314_2.00 		Cannabis sativa
GGGSCCMS
SKGGSCCC		 PBM
Lambert et al.(2019)
pTH10180 		0.842 0.389
For this family, TFs with SR scores > 0.822 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01312_2.00 TCP 52 210

DNA Binding Domains

Protein ID Domain From To Sequence
OS03T0706500-01 TCP 113 271

Links

Other TCP family TFs
Other Oryza sativa TFs

95 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29738.m001041 Ricinus communis 29738.m001041 I 0.823
30174.m008721 Ricinus communis 30174.m008721 I 0.834
AC190734.2_FG003 Zea mays AC190734.2_FG003 I 0.918
AC233950.1_FG002 Zea mays AC233950.1_FG002 I 0.941
Aquca_002_01093 Aquilegia coerulea Aquca_002_01093 I 0.836
BRC1 Arabidopsis thaliana AT3G18550 I 0.828
BGIOSGA013417 Oryza indica BGIOSGA013417 I 0.983
BGIOSGA028717 Oryza indica BGIOSGA028717 I 0.830
BGIOSGA030744 Oryza indica BGIOSGA030744 I 0.842
Bo1g117490 Brassica oleracea Bo1g117490 I 0.828
Bo3g071560 Brassica oleracea Bo3g071560 I 0.838
Bostr.19424s0807 Boechera stricta Bostr.19424s0807 I 0.836
Bostr.26959s0184 Boechera stricta Bostr.26959s0184 I 0.830
Bra001710 Brassica rapa Bra001710 I 0.825
Bra037579 Brassica rapa Bra037579 I 0.828
BRADI1G11060 Brachypodium distachyon BRADI1G11060 I 0.938
BRADI4G29980 Brachypodium distachyon BRADI4G29980 I 0.860
Cagra.1125s0016 Capsella grandiflora Cagra.1125s0016 I 0.824
Cagra.1681s0023 Capsella grandiflora Cagra.1681s0023 I 0.838
Carubv10013748m.g Capsella rubella Carubv10013748m.g I 0.838
Carubv10020555m.g Capsella rubella Carubv10020555m.g I 0.830
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.843
Cucsa.280880 Cucumis sativus Cucsa.280880 I 0.823
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.847
evm.TU.supercontig_179.29 Carica papaya evm.TU.supercontig_179.29 I 0.843
F775_01923 Aegilops tauschii F775_01923 I 0.839
GLYMA04G22407 Glycine max GLYMA04G22407 I 0.826
Gorai.001G200400 Gossypium raimondii Gorai.001G200400 I 0.828
GRMZM2G031905 Zea mays GRMZM2G031905 I 0.834
GRMZM2G055024 Zea mays GRMZM2G055024 I 0.832
GRMZM2G060319 Zea mays GRMZM2G060319 I 0.826
GRMZM2G062711 Zea mays GRMZM2G062711 I 0.825
GRMZM2G064628 Zea mays GRMZM2G064628 I 0.827
GRMZM2G110242 Zea mays GRMZM2G110242 I 0.857
GRMZM2G166687 Zea mays GRMZM2G166687 I 0.836
GSMUA_Achr10G25520_001 Musa acuminata GSMUA_Achr10G25520_001 I 0.843
GSMUA_Achr2G21050_001 Musa acuminata GSMUA_Achr2G21050_001 I 0.853
GSMUA_Achr2G22480_001 Musa acuminata GSMUA_Achr2G22480_001 I 0.844
LPERR03G25950 Leersia perrieri LPERR03G25950 I 0.957
LPERR08G12880 Leersia perrieri LPERR08G12880 I 0.842
LPERR09G06870 Leersia perrieri LPERR09G06870 I 0.829
mgf024687m Mimulus guttatus mgf024687m I 0.822
MLOC_4614 Hordeum vulgare MLOC_4614 I 0.838
MLOC_58142 Hordeum vulgare MLOC_58142 I 0.845
MLOC_70116 Hordeum vulgare MLOC_70116 I 0.935
OB03G38320 Oryza brachyantha OB03G38320 I 0.912
OBART03G31290 Oryza barthii OBART03G31290 I 0.974
OBART09G10040 Oryza barthii OBART09G10040 I 0.842
OGLUM03G31540 Oryza glumaepatula OGLUM03G31540 I 0.982
OGLUM08G16380 Oryza glumaepatula OGLUM08G16380 I 0.830
OGLUM09G10300 Oryza glumaepatula OGLUM09G10300 I 0.842
OLONG_002570 Oryza longistaminata OLONG_002570 I 0.597
OMERI03G27910 Oryza meridionalis OMERI03G27910 I 0.971
OMERI08G12900 Oryza meridionalis OMERI08G12900 I 0.839
OMERI09G07770 Oryza meridionalis OMERI09G07770 I 0.869
ONIVA03G32600 Oryza nivara ONIVA03G32600 I 0.983
ONIVA08G16720 Oryza nivara ONIVA08G16720 I 0.826
ONIVA09G09540 Oryza nivara ONIVA09G09540 I 0.842
OPUNC03G28490 Oryza punctata OPUNC03G28490 I 0.961
OPUNC08G13710 Oryza punctata OPUNC08G13710 I 0.845
OPUNC09G08520 Oryza punctata OPUNC09G08520 I 0.838
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.843
ORGLA03G0289500 Oryza glaberrima ORGLA03G0289500 I 0.974
ORGLA08G0137200 Oryza glaberrima ORGLA08G0137200 I 0.826
ORUFI03G32570 Oryza rufipogon ORUFI03G32570 I 0.983
ORUFI08G17540 Oryza rufipogon ORUFI08G17540 I 0.830
ORUFI09G10660 Oryza rufipogon ORUFI09G10660 I 0.842
OS08G0432300 Oryza sativa OS08G0432300 I 0.830
OS09G0410500 Oryza sativa OS09G0410500 I 0.842
Pavir.Ba01820 Panicum virgatum Pavir.Ba01820 I 0.836
Pavir.Bb02154 Panicum virgatum Pavir.Bb02154 I 0.829
Pavir.Fa00870 Panicum virgatum Pavir.Fa00870 I 0.869
Pavir.Fb01590 Panicum virgatum Pavir.Fb01590 I 0.857
Pavir.Ia00838 Panicum virgatum Pavir.Ia00838 I 0.949
Pavir.Ib04362 Panicum virgatum Pavir.Ib04362 I 0.945
PK12240.1 Cannabis sativa PK12240.1 D 0.842
Pm030202 Prunus mume Pm030202 I 0.855
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.855
SapurV1A.0682s0140 Salix purpurea SapurV1A.0682s0140 I 0.835
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I 0.822
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I 0.822
Sb01g010690 Sorghum bicolor Sb01g010690 I 0.943
Sb02g024450 Sorghum bicolor Sb02g024450 I 0.844
Sb07g021140 Sorghum bicolor Sb07g021140 I 0.852
Si015230m.g Setaria italica Si015230m.g I 0.850
Si033183m.g Setaria italica Si033183m.g I 0.840
Si038692m.g Setaria italica Si038692m.g I 0.938
TCM_012252 Theobroma cacao TCM_012252 I 0.833
Traes_4AL_75D069945 Triticum aestivum Traes_4AL_75D069945 I 0.940
Traes_4BS_DC076554D Triticum aestivum Traes_4BS_DC076554D I 0.939
Traes_4DS_59A46B69A Triticum aestivum Traes_4DS_59A46B69A I 0.940
Traes_5BL_19F383CC71 Triticum aestivum Traes_5BL_19F383CC71 I 0.838
Traes_5DL_46A3B0DAB1 Triticum aestivum Traes_5DL_46A3B0DAB1 I 0.863
TRIUR3_20728 Triticum urartu TRIUR3_20728 I 0.854
TRIUR3_31795 Triticum urartu TRIUR3_31795 I 0.940