PGSC0003DMG400026626 (Solanum tuberosum)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 PGSC0003DMG400026626 T344273_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.905 0.331
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.902 0.325
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.899 0.325
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.899 0.325
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.899 0.325
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.898 0.331
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.854 0.312
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.842 0.312
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.842 0.312
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.827 0.261
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.827 0.261
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400068477 TCP 101 449
PGSC0003DMT400068478 TCP 101 418

Links

Other TCP family TFs
Other Solanum tuberosum TFs

319 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R003860 Calypte anna Aan_R003860 I
Alligator_sinensis_CCG009150.1 Alligator sinensis Alligator_sinensis_CCG009150.1 I
Cmyd_10002066 Chelonia mydas Cmyd_10002066 I
Cmyd_10021444 Chelonia mydas Cmyd_10021444 I
NFATC1 Anolis carolinensis ENSACAG00000000941 I
NFATC4 Anolis carolinensis ENSACAG00000009230 I
NFATC3 Anolis carolinensis ENSACAG00000009839 I
ENSAMEG00000008086 Ailuropoda melanoleuca ENSAMEG00000008086 I
ENSAMEG00000015941 Ailuropoda melanoleuca ENSAMEG00000015941 I
ENSAMXG00000005881 Astyanax mexicanus ENSAMXG00000005881 I
ENSAMXG00000011048 Astyanax mexicanus ENSAMXG00000011048 I
ENSAPLG00000013017 Anas platyrhynchos ENSAPLG00000013017 I
NFATC1 Bos taurus ENSBTAG00000000656 I
NFATC3 Bos taurus ENSBTAG00000004368 I
NFATC4 Bos taurus ENSBTAG00000006366 I
NFATC2 Bos taurus ENSBTAG00000018270 I
NFATC4 Canis familiaris ENSCAFG00000012375 I
NFATC3 Canis familiaris ENSCAFG00000020324 I
NFATC4 Callithrix jacchus ENSCJAG00000006414 I
NFATC3 Callithrix jacchus ENSCJAG00000015726 I
NFATC1 Callithrix jacchus ENSCJAG00000023446 I
NFATC1 Cavia porcellus ENSCPOG00000003999 I
NFATC4 Cavia porcellus ENSCPOG00000014418 I
ENSCSAG00000004060 Chlorocebus sabaeus ENSCSAG00000004060 I
ENSCSAG00000015857 Chlorocebus sabaeus ENSCSAG00000015857 I
nfatc1 Danio rerio ENSDARG00000036168 I
nfatc3b Danio rerio ENSDARG00000051729 I
nfatc3a Danio rerio ENSDARG00000076297 I
NFATC4 Dasypus novemcinctus ENSDNOG00000003323 I
NFATC3 Dasypus novemcinctus ENSDNOG00000018583 I
NFATC4 Equus caballus ENSECAG00000010992 I
NFATC3 Equus caballus ENSECAG00000014089 I
NFATC1 Equus caballus ENSECAG00000019813 I
NFATC4 Erinaceus europaeus ENSEEUG00000012781 I
NFATC4 Echinops telfairi ENSETEG00000018556 I
ENSFALG00000007757 Ficedula albicollis ENSFALG00000007757 I
ENSFALG00000013042 Ficedula albicollis ENSFALG00000013042 I
ENSFALG00000013333 Ficedula albicollis ENSFALG00000013333 I
NFATC4 Felis catus ENSFCAG00000005602 I
NFATC3 Felis catus ENSFCAG00000030997 I
NFATC3 Homo sapiens ENSG00000072736 D
NFATC4 Homo sapiens ENSG00000100968 D
NFATC1 Homo sapiens ENSG00000131196 D
NFATC1 Gasterosteus aculeatus ENSGACG00000005481 I
nfatc3a Gasterosteus aculeatus ENSGACG00000016365 I
NFATC3 Gallus gallus ENSGALG00000003396 I
ENSGALG00000012654 Gallus gallus ENSGALG00000012654 I
NFATC4 Gorilla gorilla ENSGGOG00000008797 I
ENSGMOG00000017004 Gadus morhua ENSGMOG00000017004 I
ENSLACG00000001332 Latimeria chalumnae ENSLACG00000001332 I
ENSLACG00000008030 Latimeria chalumnae ENSLACG00000008030 I
NFATC1 Loxodonta africana ENSLAFG00000008297 I
NFATC4 Loxodonta africana ENSLAFG00000014579 I
NFATC3 Loxodonta africana ENSLAFG00000014599 I
ENSLOCG00000007875 Lepisosteus oculatus ENSLOCG00000007875 I
ENSLOCG00000008087 Lepisosteus oculatus ENSLOCG00000008087 I
NFATC1 Meleagris gallopavo ENSMGAG00000002215 D
NFATC3 Meleagris gallopavo ENSMGAG00000003992 I
NFATC3 Myotis lucifugus ENSMLUG00000005918 I
NFATC4 Myotis lucifugus ENSMLUG00000011274 I
NFATC2 Myotis lucifugus ENSMLUG00000014668 I
NFATC3 Macaca mulatta ENSMMUG00000021843 I
NFATC4 Monodelphis domestica ENSMODG00000002992 I
ENSMPUG00000005665 Mustela putorius furo ENSMPUG00000005665 I
ENSMPUG00000006942 Mustela putorius furo ENSMPUG00000006942 I
Nfatc4 Mus musculus ENSMUSG00000023411 D
Nfatc3 Mus musculus ENSMUSG00000031902 D
Nfatc1 Mus musculus ENSMUSG00000033016 D
ENSNLEG00000005116 Nomascus leucogenys ENSNLEG00000005116 I
ENSNLEG00000015487 Nomascus leucogenys ENSNLEG00000015487 I
ENSOARG00000003342 Ovis aries ENSOARG00000003342 I
ENSOARG00000014239 Ovis aries ENSOARG00000014239 I
ENSOARG00000019084 Ovis aries ENSOARG00000019084 I
NFATC3 Oryctolagus cuniculus ENSOCUG00000010052 I
NFATC2 Oryctolagus cuniculus ENSOCUG00000012556 I
NFATC4 Oryctolagus cuniculus ENSOCUG00000015145 I
NFATC4 Otolemur garnettii ENSOGAG00000006090 I
NFATC1 Otolemur garnettii ENSOGAG00000008159 I
NFATC2 Otolemur garnettii ENSOGAG00000013787 I
NFATC3 Otolemur garnettii ENSOGAG00000032524 I
ENSONIG00000002481 Oreochromis niloticus ENSONIG00000002481 I
ENSONIG00000007307 Oreochromis niloticus ENSONIG00000007307 I
NFATC1 Ochotona princeps ENSOPRG00000008019 I
NFATC4 Ochotona princeps ENSOPRG00000016715 I
nfatc1 Oryzias latipes ENSORLG00000008055 I
nfatc3a Oryzias latipes ENSORLG00000011964 I
ENSP00000300659 Macaca fascicularis ENSP00000300659 I
ENSP00000300659-D1 Bos grunniens ENSP00000300659-D1 I
ENSP00000388910 Macaca fascicularis ENSP00000388910 I
ENSP00000388910-D1 Bos grunniens ENSP00000388910-D1 I
ENSPANG00000018698 Papio anubis ENSPANG00000018698 I
ENSPANG00000020004 Papio anubis ENSPANG00000020004 I
ENSPCAG00000002972 Procavia capensis ENSPCAG00000002972 I
NFATC3 Procavia capensis ENSPCAG00000005143 I
ENSPFOG00000006116 Poecilia formosa ENSPFOG00000006116 I
ENSPFOG00000019133 Poecilia formosa ENSPFOG00000019133 I
ENSPPYG00000005704 Pongo abelii ENSPPYG00000005704 I
ENSPPYG00000007483 Pongo abelii ENSPPYG00000007483 I
ENSPSIG00000011711 Pelodiscus sinensis ENSPSIG00000011711 I
NFATC4 Pan troglodytes ENSPTRG00000006218 I
NFATC3 Pan troglodytes ENSPTRG00000008260 I
NFATC2 Pteropus vampyrus ENSPVAG00000003626 I
NFATC4 Pteropus vampyrus ENSPVAG00000007042 I
NFATC3 Pteropus vampyrus ENSPVAG00000016625 I
Nfatc1 Rattus norvegicus ENSRNOG00000017146 I
Nfatc4 Rattus norvegicus ENSRNOG00000020482 I
Nfatc3 Rattus norvegicus ENSRNOG00000054264 I
ENSSHAG00000006860 Sarcophilus harrisii ENSSHAG00000006860 I
ENSSHAG00000010150 Sarcophilus harrisii ENSSHAG00000010150 I
NFATC4 Sus scrofa ENSSSCG00000001986 I
ENSSTOG00000002871 Ictidomys tridecemlineatus ENSSTOG00000002871 I
ENSSTOG00000008168 Ictidomys tridecemlineatus ENSSTOG00000008168 I
ENSSTOG00000022700 Ictidomys tridecemlineatus ENSSTOG00000022700 I
NFATC1 Taeniopygia guttata ENSTGUG00000006621 I
NFATC3 Taeniopygia guttata ENSTGUG00000007006 I
nfatc3a Tetraodon nigroviridis ENSTNIG00000011351 I
nfatc3a Takifugu rubripes ENSTRUG00000007833 I
ENSTSYG00000010321 Tarsius syrichta ENSTSYG00000010321 I
NFATC4 Tursiops truncatus ENSTTRG00000008642 I
NFATC3 Tursiops truncatus ENSTTRG00000014611 I
NFATC1 Tursiops truncatus ENSTTRG00000016530 I
NFATC3 Vicugna pacos ENSVPAG00000002581 I
ENSXMAG00000009087 Xiphophorus maculatus ENSXMAG00000009087 I
ENSXMAG00000017348 Xiphophorus maculatus ENSXMAG00000017348 I
Gfo_R000615 Geospiza fortis Gfo_R000615 I
Gfo_R015940 Geospiza fortis Gfo_R015940 I
Myotis_brandtii_Nfatc4_10003693 Myotis brandtii Myotis_brandtii_Nfatc4_10003693 I
Pvit_04251 Pogona vitticeps Pvit_04251 I
Pvit_05133 Pogona vitticeps Pvit_05133 I
Pvit_07799 Pogona vitticeps Pvit_07799 I
Tal_R012379 Tyto alba Tal_R012379 I
nfatc3 Xenopus tropicalis XB-GENE-493918 I
nfatc3.S Xenopus laevis XB-GENE-866300 I
nfatc4 Xenopus tropicalis XB-GENE-876539 I