Aquca_002_01093 (Aquilegia coerulea)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Aquca_002_01093 T344685_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK12240.1
M01314_2.00 		Cannabis sativa
GGGSCCMS
SKGGSCCC		 PBM
Lambert et al.(2019)
pTH10180 		0.923 0.432
TCP1
M07276_2.00 		Arabidopsis thaliana
RNNNDNHNDNNNDDDNNNRKGGGRCCCACH
DGTGGGYCCCMYNNNHHHNNNHNDNHNNNY		 Dap-seq
OMalley et al.(2016)
TCP1_col_a 		0.845 0.411
PK19717.1
M01318_2.00 		Cannabis sativa
GGGSCCCMC
GKGGGSCCC		 PBM
Lambert et al.(2019)
pTH10142 		0.845 0.459
TB1
M01312_2.00 		Oryza sativa
GGSCCCCCYM
KRGGGGGSCC		 PBM
Lambert et al.(2019)
pTH8740 		0.836 0.432
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aquca_002_01093.1 TCP 82 227

Links

Other TCP family TFs
Other Aquilegia coerulea TFs

137 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00145p00098450 Amborella trichopoda AMTR_s00145p00098450 I
evm.TU.supercontig_92.99 Carica papaya evm.TU.supercontig_92.99 I
F775_14172 Aegilops tauschii F775_14172 I
GLYMA10G06680 Glycine max GLYMA10G06680 N
GSMUA_Achr10G13520_001 Musa acuminata GSMUA_Achr10G13520_001 I
GSMUA_Achr10G14030_001 Musa acuminata GSMUA_Achr10G14030_001 I
GSMUA_Achr5G06530_001 Musa acuminata GSMUA_Achr5G06530_001 I
GSMUA_Achr5G28350_001 Musa acuminata GSMUA_Achr5G28350_001 I
GSMUA_Achr6G14840_001 Musa acuminata GSMUA_Achr6G14840_001 I
GSMUA_Achr6G15370_001 Musa acuminata GSMUA_Achr6G15370_001 I
GSMUA_Achr7G18200_001 Musa acuminata GSMUA_Achr7G18200_001 I
MTR_1g062940 Medicago truncatula MTR_1g062940 N
OB01G54920 Oryza brachyantha OB01G54920 I
Solyc09g008390.1 Solanum lycopersicum Solyc09g008390.1 I
Traes_1BS_B44ECE28C Triticum aestivum Traes_1BS_B44ECE28C I
Traes_1DS_47E2D90AC Triticum aestivum Traes_1DS_47E2D90AC I
Traes_1DS_47E2D90AC1 Triticum aestivum Traes_1DS_47E2D90AC1 I