6292_YER064C (Saccharomyces paradoxus)
VHR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04001 (Vhr1) IPR007147 6292_YER064C T350458_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VHR2
M00917_2.00 		Saccharomyces cerevisiae
NRTGACTCAN
NTGAGTCAYN		 PBM
Gordan et al.(2011)
Vhr2 		0.934 0.934
VHR1
M08640_2.00 		Saccharomyces cerevisiae
TCANNNNNNNNTGATT
AATCANNNNNNNNTGA		 Misc
DeBoer et al.(2011)
YIL056W_1325 		0.802 0.802
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
6292_YER064C VHR1 22 112

Links

Other VHR1 family TFs
Other Saccharomyces paradoxus TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
10921_YIL056W Saccharomyces mikatae 10921_YIL056W I 0.802
11035_YIL056W Saccharomyces paradoxus 11035_YIL056W I 0.802
11559_YIL056W Saccharomyces bayanus 11559_YIL056W I 0.802
6651_YER064C Saccharomyces mikatae 6651_YER064C I 0.967
7027_YER064C Saccharomyces bayanus 7027_YER064C I 0.956
AACERI_AaceriADL067C Saccharomycetaceae sp ashbya aceri AACERI_AaceriADL067C I 0.780
AGOS_ADL067C Ashbya gossypii AGOS_ADL067C I 0.780
CAGL0J03014g Candida glabrata CAGL0J03014g I 0.780
Ecym_4329 Eremothecium cymbalariae Ecym_4329 I 0.769
KAFR_0I01770 Kazachstania africana KAFR_0I01770 I 0.714
KAFR_0L00930 Kazachstania africana KAFR_0L00930 I 0.791
KLLA0_C08151g Kluyveromyces lactis KLLA0_C08151g I 0.758
KLTH0A04444g Lachancea thermotolerans KLTH0A04444g I 0.725
KLTH0A04444g Kluyveromyces thermotolerans KLTH0A04444g I 0.725
KNAG_0L01530 Kazachstania naganishii KNAG_0L01530 I 0.769
Kpol_1066p52 Vanderwaltozyma polyspora Kpol_1066p52 I 0.802
LALA0_S01e02388g Lachancea lanzarotensis LALA0_S01e02388g I 0.714
NCAS_0A13540 Naumovozyma castellii NCAS_0A13540 I 0.725
NCAS_0E03320 Naumovozyma castellii NCAS_0E03320 I 0.813
NDAI_0A02490 Naumovozyma dairenensis NDAI_0A02490 I 0.736
NDAI_0E04810 Naumovozyma dairenensis NDAI_0E04810 I 0.802
SAKL0F08734g Lachancea kluyveri SAKL0F08734g I 0.791
Scas_Contig701.7 Saccharomyces castellii Scas_Contig701.7 I 0.813
Scas_Contig704.29 Saccharomyces castellii Scas_Contig704.29 I 0.725
SKUD_176205 Saccharomyces kudriavzevii SKUD_176205 I 0.923
SU7_1620 Saccharomyces arboricola SU7_1620 I 0.802
TBLA_0C04650 Tetrapisispora blattae TBLA_0C04650 I 0.802
TDEL_0H01980 Torulaspora delbrueckii TDEL_0H01980 I 0.780
TPHA_0J00900 Tetrapisispora phaffii TPHA_0J00900 I 0.780
VHR2 Saccharomyces cerevisiae YER064C D 0.934
VHR1 Saccharomyces cerevisiae YIL056W D 0.802
ZBAI_00133 Zygosaccharomyces bailii ZBAI_00133 I 0.780
ZBAI_05302 Zygosaccharomyces bailii ZBAI_05302 I 0.791
ZYRO0C08250g Zygosaccharomyces rouxii ZYRO0C08250g I 0.791