CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra023211
(
Brassica rapa
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03106 (WRKY)
IPR003657
Bra023211
T352313_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY62
M02561_2.00
Arabidopsis thaliana
TRGTCAAM
KTTGACYA
PBM
Weirauch et al.(2014)
pTH8246
0.869
0.864
WRKY38
M00901_2.00
Arabidopsis thaliana
NNRGTCAACBN
NVGTTGACYNN
PBM
Franco-Zorrilla et al.(2014)
WRKY38
0.847
0.661
WRKY63
M02546_2.00
Arabidopsis thaliana
NGGTCAAN
NTTGACCN
PBM
Weirauch et al.(2014)
pTH8182
0.827
0.644
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra023211.1-P
WRKY
114
174
HDGFLWRKYGQKQIKESDHQRSYYKCAYTNDQKCEAKKQVQMIQNNPPLYSTTYFGRHTCQ
Links
Other
WRKY
family TFs
Other
Brassica rapa
TFs
136 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACEP14857
Atta cephalotes
ACEP14857
I
0.000
ACYPI31510
Acyrthosiphon pisum
ACYPI31510
I
0.000
AFAF020264
Anopheles farauti
AFAF020264
I
0.000
AMAM003778
Anopheles maculatus
AMAM003778
I
0.000
CapteG130298
Capitella teleta
CapteG130298
I
0.000
Cmyd_10014184
Chelonia mydas
Cmyd_10014184
I
0.000
csin103932
Clonorchis sinensis
csin103932
N
0.000
ENSAMEG00000015014
Ailuropoda melanoleuca
ENSAMEG00000015014
I
0.000
ENSBTAG00000003540
Bos taurus
ENSBTAG00000003540
I
0.000
ST18
Homo sapiens
ENSG00000147488
I
0.000
MYT1L
Homo sapiens
ENSG00000186487
I
0.000
ENSLACG00000008399
Latimeria chalumnae
ENSLACG00000008399
I
0.000
MYT1L
Macaca mulatta
ENSMMUG00000009310
I
0.000
ENSTGUG00000014218
Taeniopygia guttata
ENSTGUG00000014218
I
0.000
HelroG85268
Helobdella robusta
HelroG85268
I
0.000
ISCW018799
Ixodes scapularis
ISCW018799
I
0.000
Minc05804
Meloidogyne incognita
Minc05804
I
0.000
Ocbimv22028295m.g
Octopus bimaculoides
Ocbimv22028295m.g
I
0.000
SMU15028607
Schmidtea mediterranea
SMU15028607
I
0.000