CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OS05G0571200
(
Oryza sativa
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03106 (WRKY)
IPR003657
OS05G0571200
T354208_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY53
M01090_2.00
Arabidopsis thaliana
RGTCAACNN
NNGTTGACY
PBM
Sullivan et al.(2014)
pTH8245
0.834
0.712
WRKY70
M07399_2.00
Arabidopsis thaliana
HAAAGTCAACGNN
NNCGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY70_col
0.834
0.610
WRKY30
M02563_2.00
Arabidopsis thaliana
RGTCAACNNN
NNNGTTGACY
PBM
Weirauch et al.(2014)
pTH7611
0.825
0.661
WRKY30
M07422_2.00
Arabidopsis thaliana
DAAGTCAACGN
NCGTTGACTTH
Dap-seq
OMalley et al.(2016)
WRKY30_col_a
0.825
0.661
WRKY30
M07423_2.00
Arabidopsis thaliana
NNAAGTCAACGNH
DNCGTTGACTTNN
Dap-seq
OMalley et al.(2016)
WRKY30_colamp_a
0.825
0.661
WRKY55
M07392_2.00
Arabidopsis thaliana
HWAGTCAACGNH
DNCGTTGACTWD
Dap-seq
OMalley et al.(2016)
WRKY55_col_a
0.815
0.627
WRKY46
M07395_2.00
Arabidopsis thaliana
VAAAGTCAAMG
CKTTGACTTTB
Dap-seq
OMalley et al.(2016)
WRKY46_col_a
0.812
0.678
WRKY46
M07396_2.00
Arabidopsis thaliana
HRAAGTCAACG
CGTTGACTTYD
Dap-seq
OMalley et al.(2016)
WRKY46_colamp_a
0.812
0.678
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OS05T0571200-01
WRKY
106
166
DDGLSWRKYGQKDILGAKYPRAYFRCTHRHTQGCNATKQVQRADGDPLLFDVVYLGDHTCG
Links
Other
WRKY
family TFs
Other
Oryza sativa
TFs
531 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TVAG_004330
Trichomonas vaginalis
TVAG_004330
N
0.000
TVAG_030270
Trichomonas vaginalis
TVAG_030270
N
0.000
TVAG_037370
Trichomonas vaginalis
TVAG_037370
N
0.000
TVAG_065540
Trichomonas vaginalis
TVAG_065540
N
0.000
TVAG_078220
Trichomonas vaginalis
TVAG_078220
N
0.000
TVAG_131780
Trichomonas vaginalis
TVAG_131780
N
0.000
TVAG_133720
Trichomonas vaginalis
TVAG_133720
N
0.000
TVAG_152850
Trichomonas vaginalis
TVAG_152850
N
0.000
TVAG_230320
Trichomonas vaginalis
TVAG_230320
N
0.000
TVAG_231870
Trichomonas vaginalis
TVAG_231870
N
0.000
TVAG_255040
Trichomonas vaginalis
TVAG_255040
N
0.000
TVAG_269580
Trichomonas vaginalis
TVAG_269580
N
0.000
TVAG_300040
Trichomonas vaginalis
TVAG_300040
N
0.000
TVAG_317130
Trichomonas vaginalis
TVAG_317130
N
0.000
TVAG_331810
Trichomonas vaginalis
TVAG_331810
N
0.000
TVAG_353210
Trichomonas vaginalis
TVAG_353210
N
0.000
TVAG_356990
Trichomonas vaginalis
TVAG_356990
N
0.000
TVAG_361810
Trichomonas vaginalis
TVAG_361810
N
0.000
TVAG_364890
Trichomonas vaginalis
TVAG_364890
N
0.000
TVAG_366530
Trichomonas vaginalis
TVAG_366530
N
0.000
TVAG_366770
Trichomonas vaginalis
TVAG_366770
N
0.000
TVAG_367290
Trichomonas vaginalis
TVAG_367290
N
0.000
TVAG_375400
Trichomonas vaginalis
TVAG_375400
N
0.000
TVAG_377090
Trichomonas vaginalis
TVAG_377090
N
0.000
TVAG_418100
Trichomonas vaginalis
TVAG_418100
N
0.000
TVAG_433330
Trichomonas vaginalis
TVAG_433330
N
0.000
TVAG_438970
Trichomonas vaginalis
TVAG_438970
N
0.000
TVAG_454650
Trichomonas vaginalis
TVAG_454650
N
0.000
TVAG_458610
Trichomonas vaginalis
TVAG_458610
N
0.000
TVAG_469490
Trichomonas vaginalis
TVAG_469490
N
0.000
TVAG_484220
Trichomonas vaginalis
TVAG_484220
N
0.000
TVAG_513300
Trichomonas vaginalis
TVAG_513300
N
0.000
TVAG_514390
Trichomonas vaginalis
TVAG_514390
N
0.000
TVAG_517040
Trichomonas vaginalis
TVAG_517040
N
0.000
TVAG_520380
Trichomonas vaginalis
TVAG_520380
N
0.000
TVAG_527500
Trichomonas vaginalis
TVAG_527500
N
0.000
TVAG_534250
Trichomonas vaginalis
TVAG_534250
N
0.000
TVAG_536150
Trichomonas vaginalis
TVAG_536150
N
0.000
TVAG_552960
Trichomonas vaginalis
TVAG_552960
N
0.000
TVAG_565490
Trichomonas vaginalis
TVAG_565490
N
0.000
TVAG_571520
Trichomonas vaginalis
TVAG_571520
N
0.000
TVAG_579320
Trichomonas vaginalis
TVAG_579320
N
0.000
TVAG_581530
Trichomonas vaginalis
TVAG_581530
N
0.000
TVAG_583570
Trichomonas vaginalis
TVAG_583570
N
0.000
TVAG_586700
Trichomonas vaginalis
TVAG_586700
N
0.000
TVAG_593090
Trichomonas vaginalis
TVAG_593090
N
0.000