Solyc03g113120.2 (Solanum lycopersicum)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 Solyc03g113120.2 T354765_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY6
M07377_2.00 		Arabidopsis thaliana
DNNNHNDHNHNRGTCAACG
CGTTGACYNDNDHNDNNNH		 Dap-seq
OMalley et al.(2016)
WRKY6_col_a 		0.873 0.847
WRKY6
M07378_2.00 		Arabidopsis thaliana
NNHNWRGTCAACKNH
DNMGTTGACYWNDNN		 Dap-seq
OMalley et al.(2016)
WRKY6_colamp_a 		0.873 0.847
WRKY31
M07408_2.00 		Arabidopsis thaliana
NNNNHNNNNNDRGTCAACG
CGTTGACYHNNNNNDNNNN		 Dap-seq
OMalley et al.(2016)
WRKY31_col_a 		0.871 0.847
WRKY31
M07409_2.00 		Arabidopsis thaliana
NHWRGTCAACKNH
DNMGTTGACYWDN		 Dap-seq
OMalley et al.(2016)
WRKY31_colamp_a 		0.871 0.847
WRKY42
M07404_2.00 		Arabidopsis thaliana
NDWRGTCAACDNNNNDNNHNN
NNDNNHNNNNHGTTGACYWHN		 Dap-seq
OMalley et al.(2016)
WRKY42_col_a 		0.869 0.831
WRKY42
M07405_2.00 		Arabidopsis thaliana
HNDNNNWRGTCAACKNHNDD
HHNDNMGTTGACYWNNNHND		 Dap-seq
OMalley et al.(2016)
WRKY42_colamp_a 		0.869 0.831
WRKY47
M00732_2.00 		Arabidopsis thaliana
NNRGTCAACKN
NMGTTGACYNN		 PBM
Chang et al.(2013)
pTH7913 		0.867 0.831
WRKY47
M07402_2.00 		Arabidopsis thaliana
WRGTCAAMGNHVDK
MHBDNCKTTGACYW		 Dap-seq
OMalley et al.(2016)
WRKY47_col_a 		0.867 0.831
WRKY47
M07403_2.00 		Arabidopsis thaliana
NNNHWRGTCAACKNHNNNN
NNNNDNMGTTGACYWDNNN		 Dap-seq
OMalley et al.(2016)
WRKY47_colamp_a 		0.867 0.831
WRKY60
M02551_2.00 		Arabidopsis thaliana
NYGGTCAAMNN
NNKTTGACCRN		 PBM
Weirauch et al.(2014)
pTH7379 		0.820 0.627
WRKY40
M02548_2.00 		Arabidopsis thaliana
NRGTCAWN
NWTGACYN		 PBM
Weirauch et al.(2014)
pTH8398 		0.820 0.610
WRKY40
M07379_2.00 		Arabidopsis thaliana
NNNAAAGTCAAVR
YBTTGACTTTNNN		 Dap-seq
OMalley et al.(2016)
WRKY40_colamp_a 		0.820 0.610
WRKY40
M07380_2.00 		Arabidopsis thaliana
NNVAAAGTCAAVRNH
DNYBTTGACTTTBNN		 Dap-seq
OMalley et al.(2016)
WRKY40_col 		0.820 0.610
WRKY40
M08180_2.00 		Arabidopsis thaliana
NNAGTCAANN
NNTTGACTNN		 ChIP-seq
Mathelier et al.(2014)
MA1085.2 		0.820 0.610
WRKY18
M02560_2.00 		Arabidopsis thaliana
NNRGTCAANN
NNTTGACYNN		 PBM
Weirauch et al.(2014)
pTH7360 		0.816 0.644
WRKY18
M00900_2.00 		Arabidopsis thaliana
NVGTCNN
NNGACBN		 PBM
Franco-Zorrilla et al.(2014)
WRKY18 		0.816 0.644
WRKY18
M07416_2.00 		Arabidopsis thaliana
NNHRGTCAASR
YSTTGACYDNN		 Dap-seq
OMalley et al.(2016)
WRKY18_col_a 		0.816 0.644
WRKY18
M07417_2.00 		Arabidopsis thaliana
NNNHWAGTCAANR
YNTTGACTWDNNN		 Dap-seq
OMalley et al.(2016)
WRKY18_colamp_a 		0.816 0.644
WRKY18
M11465_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRKY18_Q2 		0.816 0.644
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc03g113120.2.1 WRKY 236 294

Links

Other WRKY family TFs
Other Solanum lycopersicum TFs

773 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R003668 Calypte anna Aan_R003668 I 0.000
Afo_R008251 Aptenodytes forsteri Afo_R008251 I 0.000
Alligator_sinensis_CCG014066.1 Alligator sinensis Alligator_sinensis_CCG014066.1 I 0.000
Brh_R001493 Buceros rhinoceros Brh_R001493 I 0.000
Cmyd_10009615 Chelonia mydas Cmyd_10009615 I 0.000
ZNF148 Anolis carolinensis ENSACAG00000010047 I 0.000
ENSAMEG00000004258 Ailuropoda melanoleuca ENSAMEG00000004258 I 0.000
ENSAMXG00000006043 Astyanax mexicanus ENSAMXG00000006043 I 0.000
ENSAPLG00000008859 Anas platyrhynchos ENSAPLG00000008859 I 0.000
ZNF148 Bos taurus ENSBTAG00000040031 I 0.000
ZNF148 Canis familiaris ENSCAFG00000012574 I 0.000
ZNF281 Choloepus hoffmanni ENSCHOG00000004074 I 0.000
ZNF281 Callithrix jacchus ENSCJAG00000005104 I 0.000
ZNF148 Callithrix jacchus ENSCJAG00000006741 I 0.000
ENSCSAG00000000250 Chlorocebus sabaeus ENSCSAG00000000250 I 0.000
znf148 Danio rerio ENSDARG00000055106 I 0.000
ZNF148 Dasypus novemcinctus ENSDNOG00000000280 I 0.000
ZNF281 Dasypus novemcinctus ENSDNOG00000016981 I 0.000
Zfp281 Dipodomys ordii ENSDORG00000002833 I 0.000
ENSDORG00000003955 Dipodomys ordii ENSDORG00000003955 I 0.000
ZNF148 Equus caballus ENSECAG00000013557 I 0.000
ZNF281 Equus caballus ENSECAG00000024354 I 0.000
ZNF281 Erinaceus europaeus ENSEEUG00000011443 I 0.000
ZNF148 Echinops telfairi ENSETEG00000002856 I 0.000
ENSFALG00000013520 Ficedula albicollis ENSFALG00000013520 I 0.000
ZNF148 Felis catus ENSFCAG00000026852 I 0.000
ZNF281 Felis catus ENSFCAG00000028447 I 0.000
ZNF281 Homo sapiens ENSG00000162702 D 0.000
ZNF148 Homo sapiens ENSG00000163848 D 0.000
ZNF148 Gallus gallus ENSGALG00000012049 I 0.000
ZNF281 Gorilla gorilla ENSGGOG00000010349 I 0.000
ENSLACG00000006364 Latimeria chalumnae ENSLACG00000006364 I 0.000
ENSLACG00000014572 Latimeria chalumnae ENSLACG00000014572 I 0.000
ZNF148 Loxodonta africana ENSLAFG00000016025 I 0.000
ENSLOCG00000002769 Lepisosteus oculatus ENSLOCG00000002769 I 0.000
ENSMEUG00000011709 Macropus eugenii ENSMEUG00000011709 I 0.000
ZNF281 Microcebus murinus ENSMICG00000001070 I 0.000
ZNF148 Macaca mulatta ENSMMUG00000001169 I 0.000
ZNF281 Macaca mulatta ENSMMUG00000007334 I 0.000
ZNF281 Monodelphis domestica ENSMODG00000012840 I 0.000
ZNF148 Monodelphis domestica ENSMODG00000018374 I 0.000
ENSMPUG00000004162 Mustela putorius furo ENSMPUG00000004162 I 0.000
ENSMPUG00000019246 Mustela putorius furo ENSMPUG00000019246 I 0.000
Zfp148 Mus musculus ENSMUSG00000022811 I 0.000
Zfp281 Mus musculus ENSMUSG00000041483 D 0.000
ENSNLEG00000000773 Nomascus leucogenys ENSNLEG00000000773 I 0.000
ENSNLEG00000018067 Nomascus leucogenys ENSNLEG00000018067 I 0.000
ENSOARG00000020237 Ovis aries ENSOARG00000020237 I 0.000
ZNF281 Oryctolagus cuniculus ENSOCUG00000010120 I 0.000
ZNF281 Otolemur garnettii ENSOGAG00000010366 I 0.000
ZNF148 Otolemur garnettii ENSOGAG00000013652 I 0.000
ENSONIG00000004240 Oreochromis niloticus ENSONIG00000004240 I 0.000
ENSP00000356322 Macaca fascicularis ENSP00000356322 I 0.000
ENSP00000420448 Macaca fascicularis ENSP00000420448 I 0.000
ENSP00000420448-D1 Bos grunniens ENSP00000420448-D1 I 0.000
ENSPANG00000004284 Papio anubis ENSPANG00000004284 I 0.000
ENSPANG00000017386 Papio anubis ENSPANG00000017386 I 0.000
ENSPFOG00000004115 Poecilia formosa ENSPFOG00000004115 I 0.000
ENSPPYG00000013462 Pongo abelii ENSPPYG00000013462 I 0.000
ENSPSIG00000003614 Pelodiscus sinensis ENSPSIG00000003614 I 0.000
ZNF281 Pan troglodytes ENSPTRG00000015318 I 0.000
ZNF148 Pteropus vampyrus ENSPVAG00000006133 I 0.000
Zfp148 Rattus norvegicus ENSRNOG00000001789 I 0.000
Zfp281 Rattus norvegicus ENSRNOG00000058643 I 0.000
ZNF148 Sorex araneus ENSSARG00000007257 I 0.000
ENSSHAG00000013855 Sarcophilus harrisii ENSSHAG00000013855 I 0.000
ZNF281 Sus scrofa ENSSSCG00000010911 I 0.000
ZNF148 Sus scrofa ENSSSCG00000011858 I 0.000
ENSSTOG00000027082 Ictidomys tridecemlineatus ENSSTOG00000027082 I 0.000
ZNF148 Tupaia belangeri ENSTBEG00000008435 I 0.000
ZNF148 Taeniopygia guttata ENSTGUG00000004010 I 0.000
znf148 Takifugu rubripes ENSTRUG00000006270 I 0.000
ENSTSYG00000007604 Tarsius syrichta ENSTSYG00000007604 I 0.000
ZNF281 Tursiops truncatus ENSTTRG00000004326 I 0.000
ZNF148 Tursiops truncatus ENSTTRG00000014714 I 0.000
Gfo_R001184 Geospiza fortis Gfo_R001184 I 0.000
Pvit_03082 Pogona vitticeps Pvit_03082 I 0.000
Tal_R010256 Tyto alba Tal_R010256 I 0.000
znf281 Xenopus tropicalis XB-GENE-5933312 I 0.000
znf148 Xenopus tropicalis XB-GENE-996852 I 0.000