CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_7DL_F849918EA
(
Triticum aestivum
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03106 (WRKY)
IPR003657
Traes_7DL_F849918EA
T355054_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY60
M02551_2.00
Arabidopsis thaliana
NYGGTCAAMNN
NNKTTGACCRN
PBM
Weirauch et al.(2014)
pTH7379
0.860
0.814
WRKY18
M02560_2.00
Arabidopsis thaliana
NNRGTCAANN
NNTTGACYNN
PBM
Weirauch et al.(2014)
pTH7360
0.858
0.831
WRKY18
M00900_2.00
Arabidopsis thaliana
NVGTCNN
NNGACBN
PBM
Franco-Zorrilla et al.(2014)
WRKY18
0.858
0.831
WRKY18
M07416_2.00
Arabidopsis thaliana
NNHRGTCAASR
YSTTGACYDNN
Dap-seq
OMalley et al.(2016)
WRKY18_col_a
0.858
0.831
WRKY18
M07417_2.00
Arabidopsis thaliana
NNNHWAGTCAANR
YNTTGACTWDNNN
Dap-seq
OMalley et al.(2016)
WRKY18_colamp_a
0.858
0.831
WRKY18
M11465_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRKY18_Q2
0.858
0.831
WRKY40
M02548_2.00
Arabidopsis thaliana
NRGTCAWN
NWTGACYN
PBM
Weirauch et al.(2014)
pTH8398
0.857
0.797
WRKY40
M07379_2.00
Arabidopsis thaliana
NNNAAAGTCAAVR
YBTTGACTTTNNN
Dap-seq
OMalley et al.(2016)
WRKY40_colamp_a
0.857
0.797
WRKY40
M07380_2.00
Arabidopsis thaliana
NNVAAAGTCAAVRNH
DNYBTTGACTTTBNN
Dap-seq
OMalley et al.(2016)
WRKY40_col
0.857
0.797
WRKY40
M08180_2.00
Arabidopsis thaliana
NNAGTCAANN
NNTTGACTNN
ChIP-seq
Mathelier et al.(2014)
MA1085.2
0.857
0.797
WRKY6
M07377_2.00
Arabidopsis thaliana
DNNNHNDHNHNRGTCAACG
CGTTGACYNDNDHNDNNNH
Dap-seq
OMalley et al.(2016)
WRKY6_col_a
0.811
0.627
WRKY6
M07378_2.00
Arabidopsis thaliana
NNHNWRGTCAACKNH
DNMGTTGACYWNDNN
Dap-seq
OMalley et al.(2016)
WRKY6_colamp_a
0.811
0.627
WRKY31
M07408_2.00
Arabidopsis thaliana
NNNNHNNNNNDRGTCAACG
CGTTGACYHNNNNNDNNNN
Dap-seq
OMalley et al.(2016)
WRKY31_col_a
0.809
0.627
WRKY31
M07409_2.00
Arabidopsis thaliana
NHWRGTCAACKNH
DNMGTTGACYWDN
Dap-seq
OMalley et al.(2016)
WRKY31_colamp_a
0.809
0.627
WRKY42
M07404_2.00
Arabidopsis thaliana
NDWRGTCAACDNNNNDNNHNN
NNDNNHNNNNHGTTGACYWHN
Dap-seq
OMalley et al.(2016)
WRKY42_col_a
0.809
0.627
WRKY42
M07405_2.00
Arabidopsis thaliana
HNDNNNWRGTCAACKNHNDD
HHNDNMGTTGACYWNNNHND
Dap-seq
OMalley et al.(2016)
WRKY42_colamp_a
0.809
0.627
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_7DL_F849918EA.2
WRKY
62
120
KDGYQWRKYGQKVTKDNPCPRAYFRCSFAPSCHVKKKVQRSAEDKAVLVATYDGDHNHA
Links
Other
WRKY
family TFs
Other
Triticum aestivum
TFs
686 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29929.m004752
Ricinus communis
29929.m004752
I
0.000
Aquca_011_00344
Aquilegia coerulea
Aquca_011_00344
I
0.000
Aquca_056_00105
Aquilegia coerulea
Aquca_056_00105
I
0.000
ARR11
Arabidopsis thaliana
AT1G67710
D
0.000
BGIOSGA000304
Oryza indica
BGIOSGA000304
I
0.000
Bo6g098710
Brassica oleracea
Bo6g098710
I
0.000
Bostr.26833s0442
Boechera stricta
Bostr.26833s0442
I
0.000
Bostr.26959s0139
Boechera stricta
Bostr.26959s0139
I
0.000
Bra004076
Brassica rapa
Bra004076
I
0.000
Bra004245
Brassica rapa
Bra004245
I
0.000
BRADI2G58020
Brachypodium distachyon
BRADI2G58020
I
0.000
Cagra.0891s0003
Capsella grandiflora
Cagra.0891s0003
I
0.000
Cagra.2261s0012
Capsella grandiflora
Cagra.2261s0012
I
0.000
Carubv10020133m.g
Capsella rubella
Carubv10020133m.g
I
0.000
Carubv10026052m.g
Capsella rubella
Carubv10026052m.g
I
0.000
cassava13981.valid.m1
Manihot esculenta
cassava13981.valid.m1
I
0.000
cassava29171.valid.m1
Manihot esculenta
cassava29171.valid.m1
I
0.000
Ca_11309
Cicer arietinum
Ca_11309
I
0.000
Ciclev10031052m.g
Citrus clementina
Ciclev10031052m.g
I
0.000
Cla023064
Citrullus lanatus
Cla023064
I
0.000
Cucsa.394720
Cucumis sativus
Cucsa.394720
I
0.000
Eucgr.H04693
Eucalyptus grandis
Eucgr.H04693
I
0.000
Eucgr.H04694
Eucalyptus grandis
Eucgr.H04694
I
0.000
evm.TU.supercontig_86.17
Carica papaya
evm.TU.supercontig_86.17
I
0.000
F775_27736
Aegilops tauschii
F775_27736
I
0.000
GLYMA05G27670
Glycine max
GLYMA05G27670
I
0.000
GLYMA08G10650
Glycine max
GLYMA08G10650
I
0.000
GLYMA11G37480
Glycine max
GLYMA11G37480
I
0.000
GLYMA18G01434
Glycine max
GLYMA18G01434
I
0.000
Gorai.005G173300
Gossypium raimondii
Gorai.005G173300
I
0.000
GRMZM2G100318
Zea mays
GRMZM2G100318
I
0.000
GRMZM2G177220
Zea mays
GRMZM2G177220
I
0.000
GSMUA_Achr3G14630_001
Musa acuminata
GSMUA_Achr3G14630_001
I
0.000
GSMUA_Achr8G32070_001
Musa acuminata
GSMUA_Achr8G32070_001
I
0.000
LjSGA_022114.1
Lotus japonicus
LjSGA_022114.1
I
0.000
LPERR01G35510
Leersia perrieri
LPERR01G35510
I
0.000
Lus10006446.g
Linum usitatissimum
Lus10006446.g
I
0.000
Lus10011389.g
Linum usitatissimum
Lus10011389.g
I
0.000
MDP0000305167
Malus domestica
MDP0000305167
I
0.000
MDP0000307383
Malus domestica
MDP0000307383
I
0.000
MDP0000320381
Malus domestica
MDP0000320381
I
0.000
mgf000016m
Mimulus guttatus
mgf000016m
I
0.000
mgf004388m
Mimulus guttatus
mgf004388m
I
0.000
mgf013006m
Mimulus guttatus
mgf013006m
I
0.000
MLOC_23250
Hordeum vulgare
MLOC_23250
I
0.000
MTR_3g086100
Medicago truncatula
MTR_3g086100
I
0.000
MTR_8g079940
Medicago truncatula
MTR_8g079940
I
0.000
OB01G49660
Oryza brachyantha
OB01G49660
I
0.000
OBART01G40940
Oryza barthii
OBART01G40940
I
0.000
OGLUM01G45120
Oryza glumaepatula
OGLUM01G45120
I
0.000
OLONG_004141
Oryza longistaminata
OLONG_004141
I
0.000
OMERI01G37950
Oryza meridionalis
OMERI01G37950
I
0.000
ONIVA01G45980
Oryza nivara
ONIVA01G45980
I
0.000
OPUNC01G39740
Oryza punctata
OPUNC01G39740
I
0.000
orange1.1g007940m.g
Citrus sinensis
orange1.1g007940m.g
I
0.000
ORGLA01G0348700
Oryza glaberrima
ORGLA01G0348700
I
0.000
ORUFI01G44260
Oryza rufipogon
ORUFI01G44260
I
0.000
RR26
Oryza sativa
OS01G0904700
I
0.000
Pavir.Ea03527
Panicum virgatum
Pavir.Ea03527
I
0.000
Pavir.J23046
Panicum virgatum
Pavir.J23046
I
0.000
PDK_20s1379531g004
Phoenix dactylifera
PDK_20s1379531g004
I
0.000
PGSC0003DMG400011980
Solanum tuberosum
PGSC0003DMG400011980
I
0.000
PK07924.1
Cannabis sativa
PK07924.1
D
0.000
Pm006838
Prunus mume
Pm006838
I
0.000
POPTR_0006s20220
Populus trichocarpa
POPTR_0006s20220
I
0.000
POPTR_0008s18130
Populus trichocarpa
POPTR_0008s18130
I
0.000
POPTR_0010s06290
Populus trichocarpa
POPTR_0010s06290
I
0.000
POPTR_0018s11960
Populus trichocarpa
POPTR_0018s11960
I
0.000
PRUPE_ppa002679mg
Prunus persica
PRUPE_ppa002679mg
I
0.000
SapurV1A.0100s0230
Salix purpurea
SapurV1A.0100s0230
I
0.000
SapurV1A.0152s0010
Salix purpurea
SapurV1A.0152s0010
I
0.000
SapurV1A.0206s0280
Salix purpurea
SapurV1A.0206s0280
I
0.000
SapurV1A.0347s0250
Salix purpurea
SapurV1A.0347s0250
I
0.000
SapurV1A.0629s0180
Salix purpurea
SapurV1A.0629s0180
I
0.000
Sb03g043080
Sorghum bicolor
Sb03g043080
I
0.000
ARR11
Arabidopsis lyrata
scaffold_201596.1
I
0.000
Si000815m.g
Setaria italica
Si000815m.g
I
0.000
Solyc05g014260.2
Solanum lycopersicum
Solyc05g014260.2
I
0.000
TCM_010701
Theobroma cacao
TCM_010701
I
0.000
Thhalv10018396m.g
Eutrema salsugineum
Thhalv10018396m.g
I
0.000
TRAES3BF094200030CFD_g
Triticum aestivum
TRAES3BF094200030CFD_g
I
0.000
TRAES3BF107400040CFD_g
Triticum aestivum
TRAES3BF107400040CFD_g
I
0.000
Traes_3AL_9D2735F60
Triticum aestivum
Traes_3AL_9D2735F60
I
0.000
Traes_3B_D9F27151E
Triticum aestivum
Traes_3B_D9F27151E
I
0.000
Traes_3DL_D82CA7827
Triticum aestivum
Traes_3DL_D82CA7827
I
0.000
ARR11
Vitis vinifera
VIT_01s0010g02230
I
0.000
VIT_17s0000g10100
Vitis vinifera
VIT_17s0000g10100
I
0.000