CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm003015
(
Prunus mume
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03106 (WRKY)
IPR003657
Pm003015
T355336_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY70
M07399_2.00
Arabidopsis thaliana
HAAAGTCAACGNN
NNCGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY70_col
0.832
0.678
WRKY46
M07395_2.00
Arabidopsis thaliana
VAAAGTCAAMG
CKTTGACTTTB
Dap-seq
OMalley et al.(2016)
WRKY46_col_a
0.812
0.610
WRKY46
M07396_2.00
Arabidopsis thaliana
HRAAGTCAACG
CGTTGACTTYD
Dap-seq
OMalley et al.(2016)
WRKY46_colamp_a
0.812
0.610
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm003015
WRKY
169
229
EDGHAWRKYGQKLILNAKHPRNYFRCTHKFDQACQATKHVQQVEDDPPLFRTTYYGNHTCR
Links
Other
WRKY
family TFs
Other
Prunus mume
TFs
228 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29729.m002369
Ricinus communis
29729.m002369
I
0.838
29915.m000479
Ricinus communis
29915.m000479
I
0.865
AC205562.3_FG002
Zea mays
AC205562.3_FG002
I
0.816
AMTR_s00077p00103580
Amborella trichopoda
AMTR_s00077p00103580
I
0.815
Aquca_013_00135
Aquilegia coerulea
Aquca_013_00135
I
0.808
Aquca_027_00037
Aquilegia coerulea
Aquca_027_00037
I
0.844
Aquca_030_00182
Aquilegia coerulea
Aquca_030_00182
I
0.809
WRKY46
Arabidopsis thaliana
AT2G46400
D
0.812
WRKY70
Arabidopsis thaliana
AT3G56400
D
0.832
BGIOSGA012571
Oryza indica
BGIOSGA012571
I
0.809
BGIOSGA019621
Oryza indica
BGIOSGA019621
I
0.821
BGIOSGA030535
Oryza indica
BGIOSGA030535
I
0.817
BGIOSGA040489
Oryza indica
BGIOSGA040489
I
0.821
Bo00913s010
Brassica oleracea
Bo00913s010
I
0.817
Bo3g035140
Brassica oleracea
Bo3g035140
I
0.808
Bo4g012750
Brassica oleracea
Bo4g012750
I
0.810
Bo4g190390
Brassica oleracea
Bo4g190390
I
0.815
Bo6g071110
Brassica oleracea
Bo6g071110
I
0.829
Bo8g090820
Brassica oleracea
Bo8g090820
I
0.829
Bostr.20505s0112
Boechera stricta
Bostr.20505s0112
I
0.829
Bostr.25993s0129
Boechera stricta
Bostr.25993s0129
I
0.810
Bostr.26959s0259
Boechera stricta
Bostr.26959s0259
I
0.809
Bra000203
Brassica rapa
Bra000203
I
0.808
Bra000423
Brassica rapa
Bra000423
I
0.811
Bra003239
Brassica rapa
Bra003239
I
0.824
Bra004586
Brassica rapa
Bra004586
I
0.808
Bra007243
Brassica rapa
Bra007243
I
0.826
Bra014692
Brassica rapa
Bra014692
I
0.817
Bra016974
Brassica rapa
Bra016974
I
0.815
Bra020196
Brassica rapa
Bra020196
I
0.811
BRADI1G63220
Brachypodium distachyon
BRADI1G63220
I
0.812
BRADI2G30695
Brachypodium distachyon
BRADI2G30695
I
0.817
BRADI2G44270
Brachypodium distachyon
BRADI2G44270
I
0.812
BRADI2G45480
Brachypodium distachyon
BRADI2G45480
I
0.814
BRADI3G34850
Brachypodium distachyon
BRADI3G34850
I
0.824
BRADI4G28280
Brachypodium distachyon
BRADI4G28280
I
0.818
BRADI4G44370
Brachypodium distachyon
BRADI4G44370
N
0.818
Cagra.0925s0056
Capsella grandiflora
Cagra.0925s0056
I
0.821
Carubv10017349m.g
Capsella rubella
Carubv10017349m.g
I
0.825
cassava23183.valid.m1
Manihot esculenta
cassava23183.valid.m1
I
0.835
cassava25180.valid.m1
Manihot esculenta
cassava25180.valid.m1
I
0.860
cassava36286.valid.m1
Manihot esculenta
cassava36286.valid.m1
I
0.876
cassava43790.valid.m1
Manihot esculenta
cassava43790.valid.m1
I
0.847
cassava7524.valid.m1
Manihot esculenta
cassava7524.valid.m1
I
0.832
cassava7525.valid.m1
Manihot esculenta
cassava7525.valid.m1
I
0.832
Ca_03952
Cicer arietinum
Ca_03952
I
0.812
Ca_09495
Cicer arietinum
Ca_09495
I
0.832
Ca_12915
Cicer arietinum
Ca_12915
I
0.822
Ca_18932
Cicer arietinum
Ca_18932
I
0.832
Ciclev10012055m.g
Citrus clementina
Ciclev10012055m.g
I
0.861
Ciclev10032192m.g
Citrus clementina
Ciclev10032192m.g
I
0.836
Ciclev10033384m.g
Citrus clementina
Ciclev10033384m.g
I
0.815
Cla007424
Citrullus lanatus
Cla007424
I
0.822
Cla015244
Citrullus lanatus
Cla015244
I
0.810
Cla018337
Citrullus lanatus
Cla018337
I
0.854
Cucsa.078810
Cucumis sativus
Cucsa.078810
I
0.812
Cucsa.143830
Cucumis sativus
Cucsa.143830
I
0.809
Cucsa.177060
Cucumis sativus
Cucsa.177060
I
0.856
Eucgr.G03144
Eucalyptus grandis
Eucgr.G03144
I
0.808
Eucgr.G03145
Eucalyptus grandis
Eucgr.G03145
I
0.829
Eucgr.J00106
Eucalyptus grandis
Eucgr.J00106
I
0.849
Eucgr.K01289
Eucalyptus grandis
Eucgr.K01289
I
0.832
evm.TU.supercontig_19.44
Carica papaya
evm.TU.supercontig_19.44
I
0.828
evm.TU.supercontig_86.64
Carica papaya
evm.TU.supercontig_86.64
I
0.838
evm.TU.supercontig_86.65
Carica papaya
evm.TU.supercontig_86.65
I
0.836
F775_02479
Aegilops tauschii
F775_02479
N
0.814
F775_25840
Aegilops tauschii
F775_25840
I
0.824
F775_25856
Aegilops tauschii
F775_25856
I
0.812
F775_30853
Aegilops tauschii
F775_30853
I
0.816
WRKY46
Arabidopsis lyrata
fgenesh2_kg.4__2854__AT2G46400.1
I
0.809
WRKY70
Arabidopsis lyrata
fgenesh2_kg.5__2072__AT3G56400.1
I
0.835
gene13546-v1.0-hybrid
Fragaria vesca
gene13546-v1.0-hybrid
I
0.860
gene13547-v1.0-hybrid
Fragaria vesca
gene13547-v1.0-hybrid
I
0.857
gene13549-v1.0-hybrid
Fragaria vesca
gene13549-v1.0-hybrid
I
0.861
gene13554-v1.0-hybrid
Fragaria vesca
gene13554-v1.0-hybrid
I
0.861
gene21365-v1.0-hybrid
Fragaria vesca
gene21365-v1.0-hybrid
I
0.822
GLYMA03G00460
Glycine max
GLYMA03G00460
I
0.829
GLYMA04G40130
Glycine max
GLYMA04G40130
I
0.819
GLYMA05G29921
Glycine max
GLYMA05G29921
I
0.808
GLYMA06G14720
Glycine max
GLYMA06G14720
I
0.819
GLYMA09G41050
Glycine max
GLYMA09G41050
I
0.846
GLYMA13G34240
Glycine max
GLYMA13G34240
I
0.831
GLYMA13G34251
Glycine max
GLYMA13G34251
I
0.817
GLYMA13G34281
Glycine max
GLYMA13G34281
I
0.826
GLYMA14G36430
Glycine max
GLYMA14G36430
I
0.810
GLYMA16G34590
Glycine max
GLYMA16G34590
I
0.835
GLYMA18G44560
Glycine max
GLYMA18G44560
I
0.837
Gorai.005G003900
Gossypium raimondii
Gorai.005G003900
I
0.843
Gorai.009G292600
Gossypium raimondii
Gorai.009G292600
I
0.828
Gorai.010G219200
Gossypium raimondii
Gorai.010G219200
I
0.830
Gorai.012G013900
Gossypium raimondii
Gorai.012G013900
I
0.818
Gorai.013G008300
Gossypium raimondii
Gorai.013G008300
I
0.825
GRMZM2G004060
Zea mays
GRMZM2G004060
I
0.811
GRMZM2G025895
Zea mays
GRMZM2G025895
I
0.824
GRMZM2G061408
Zea mays
GRMZM2G061408
I
0.824
GRMZM2G139815
Zea mays
GRMZM2G139815
I
0.815
GRMZM2G163418
Zea mays
GRMZM2G163418
I
0.822
GRMZM2G324999
Zea mays
GRMZM2G324999
I
0.812
GRMZM2G411766
Zea mays
GRMZM2G411766
I
0.809
GSMUA_Achr5G07490_001
Musa acuminata
GSMUA_Achr5G07490_001
I
0.815
LPERR01G21480
Leersia perrieri
LPERR01G21480
I
0.811
LPERR03G14340
Leersia perrieri
LPERR03G14340
I
0.815
LPERR05G09130
Leersia perrieri
LPERR05G09130
I
0.817
LPERR08G11030
Leersia perrieri
LPERR08G11030
I
0.817
LPERR09G04330
Leersia perrieri
LPERR09G04330
I
0.819
Lus10012870.g
Linum usitatissimum
Lus10012870.g
I
0.813
Lus10025133.g
Linum usitatissimum
Lus10025133.g
I
0.816
Lus10025216.g
Linum usitatissimum
Lus10025216.g
I
0.820
Lus10029021.g
Linum usitatissimum
Lus10029021.g
I
0.813
Lus10030517.g
Linum usitatissimum
Lus10030517.g
I
0.816
MDP0000146360
Malus domestica
MDP0000146360
I
0.808
MDP0000175240
Malus domestica
MDP0000175240
I
0.834
MDP0000299114
Malus domestica
MDP0000299114
I
0.808
MDP0000578301
Malus domestica
MDP0000578301
I
0.820
MDP0000754989
Malus domestica
MDP0000754989
I
0.851
mgf002542m
Mimulus guttatus
mgf002542m
I
0.844
mgf009193m
Mimulus guttatus
mgf009193m
I
0.860
MLOC_44455
Hordeum vulgare
MLOC_44455
I
0.811
MLOC_45055
Hordeum vulgare
MLOC_45055
I
0.816
MLOC_66134
Hordeum vulgare
MLOC_66134
I
0.811
MLOC_71897
Hordeum vulgare
MLOC_71897
I
0.822
MTR_0002s1250
Medicago truncatula
MTR_0002s1250
I
0.814
MTR_2g075610
Medicago truncatula
MTR_2g075610
I
0.818
MTR_2g075680
Medicago truncatula
MTR_2g075680
I
0.831
MTR_2g075690
Medicago truncatula
MTR_2g075690
I
0.834
MTR_2g075750
Medicago truncatula
MTR_2g075750
I
0.818
MTR_3g090860
Medicago truncatula
MTR_3g090860
I
0.814
MTR_7g073380
Medicago truncatula
MTR_7g073380
I
0.837
MTR_7g073430
Medicago truncatula
MTR_7g073430
I
0.826
MTR_8g005750
Medicago truncatula
MTR_8g005750
I
0.829
MTR_8g032510
Medicago truncatula
MTR_8g032510
N
0.810
OB0086G10030
Oryza brachyantha
OB0086G10030
I
0.814
OB03G26140
Oryza brachyantha
OB03G26140
I
0.819
OB09G14040
Oryza brachyantha
OB09G14040
I
0.816
OBART03G16400
Oryza barthii
OBART03G16400
I
0.809
OBART05G11710
Oryza barthii
OBART05G11710
I
0.821
OBART09G06020
Oryza barthii
OBART09G06020
I
0.815
OGLUM03G16780
Oryza glumaepatula
OGLUM03G16780
I
0.809
OGLUM05G12430
Oryza glumaepatula
OGLUM05G12430
I
0.821
OGLUM07G10380
Oryza glumaepatula
OGLUM07G10380
I
0.821
OGLUM09G06630
Oryza glumaepatula
OGLUM09G06630
I
0.815
OLONG_024544
Oryza longistaminata
OLONG_024544
I
0.809
OMERI03G14670
Oryza meridionalis
OMERI03G14670
I
0.809
OMERI05G10380
Oryza meridionalis
OMERI05G10380
I
0.821
OMERI08G11390
Oryza meridionalis
OMERI08G11390
I
0.821
OMERI09G04750
Oryza meridionalis
OMERI09G04750
I
0.815
ONIVA03G17390
Oryza nivara
ONIVA03G17390
I
0.809
ONIVA05G12100
Oryza nivara
ONIVA05G12100
I
0.821
ONIVA08G13920
Oryza nivara
ONIVA08G13920
I
0.821
ONIVA09G05410
Oryza nivara
ONIVA09G05410
I
0.817
OPUNC05G10020
Oryza punctata
OPUNC05G10020
I
0.821
OPUNC09G05480
Oryza punctata
OPUNC09G05480
I
0.811
orange1.1g018407m.g
Citrus sinensis
orange1.1g018407m.g
I
0.815
orange1.1g020291m.g
Citrus sinensis
orange1.1g020291m.g
I
0.861
orange1.1g021598m.g
Citrus sinensis
orange1.1g021598m.g
I
0.836
ORGLA05G0099400
Oryza glaberrima
ORGLA05G0099400
I
0.821
ORGLA08G0116200
Oryza glaberrima
ORGLA08G0116200
I
0.821
ORUFI03G16960
Oryza rufipogon
ORUFI03G16960
I
0.809
ORUFI05G12710
Oryza rufipogon
ORUFI05G12710
I
0.821
ORUFI08G15010
Oryza rufipogon
ORUFI08G15010
I
0.821
ORUFI09G06720
Oryza rufipogon
ORUFI09G06720
I
0.818
OS03G0335200
Oryza sativa
OS03G0335200
I
0.809
OS05G0322900
Oryza sativa
OS05G0322900
I
0.821
OS08G0386200
Oryza sativa
OS08G0386200
I
0.821
OS09G0334500
Oryza sativa
OS09G0334500
I
0.818
Pavir.Ba02544
Panicum virgatum
Pavir.Ba02544
I
0.809
Pavir.Ba02545
Panicum virgatum
Pavir.Ba02545
I
0.823
Pavir.Bb02088
Panicum virgatum
Pavir.Bb02088
I
0.823
Pavir.Ca02012
Panicum virgatum
Pavir.Ca02012
I
0.824
Pavir.Cb01173
Panicum virgatum
Pavir.Cb01173
I
0.824
Pavir.Fa01520
Panicum virgatum
Pavir.Fa01520
I
0.823
Pavir.Gb01556
Panicum virgatum
Pavir.Gb01556
I
0.814
Pavir.Ib01568
Panicum virgatum
Pavir.Ib01568
I
0.809
Pavir.J03334
Panicum virgatum
Pavir.J03334
I
0.808
Pavir.J05812
Panicum virgatum
Pavir.J05812
I
0.808
Pavir.J37854
Panicum virgatum
Pavir.J37854
I
0.823
PDK_20s1519811g002
Phoenix dactylifera
PDK_20s1519811g002
I
0.808
PDK_20s1571901g001
Phoenix dactylifera
PDK_20s1571901g001
I
0.812
PGSC0003DMG400008391
Solanum tuberosum
PGSC0003DMG400008391
I
0.851
PGSC0003DMG400020608
Solanum tuberosum
PGSC0003DMG400020608
I
0.821
PGSC0003DMG400027582
Solanum tuberosum
PGSC0003DMG400027582
I
0.835
PGSC0003DMG400029207
Solanum tuberosum
PGSC0003DMG400029207
I
0.839
PGSC0003DMG402033880
Solanum tuberosum
PGSC0003DMG402033880
N
0.814
PK03324.1
Cannabis sativa
PK03324.1
I
0.852
PK10616.1
Cannabis sativa
PK10616.1
I
0.822
PK21378.1
Cannabis sativa
PK21378.1
I
0.818
Pm003013
Prunus mume
Pm003013
I
0.880
Pm003014
Prunus mume
Pm003014
I
0.859
Pm019286
Prunus mume
Pm019286
I
0.818
POPTR_0006s10950
Populus trichocarpa
POPTR_0006s10950
I
0.858
POPTR_0013s09470
Populus trichocarpa
POPTR_0013s09470
I
0.827
POPTR_0016s14490
Populus trichocarpa
POPTR_0016s14490
I
0.861
PRUPE_ppa008573mg
Prunus persica
PRUPE_ppa008573mg
I
0.808
PRUPE_ppa020736mg
Prunus persica
PRUPE_ppa020736mg
I
0.859
PRUPE_ppa025912mg
Prunus persica
PRUPE_ppa025912mg
I
0.892
PRUPE_ppa026125mg
Prunus persica
PRUPE_ppa026125mg
I
0.817
PRUPE_ppa026704mg
Prunus persica
PRUPE_ppa026704mg
I
0.878
SapurV1A.0065s0580
Salix purpurea
SapurV1A.0065s0580
I
0.859
SapurV1A.0356s0010
Salix purpurea
SapurV1A.0356s0010
I
0.850
SapurV1A.0914s0120
Salix purpurea
SapurV1A.0914s0120
I
0.850
Sb02g022280
Sorghum bicolor
Sb02g022280
I
0.819
Sb02g022290
Sorghum bicolor
Sb02g022290
I
0.818
Sb06g013835
Sorghum bicolor
Sb06g013835
I
0.812
Sb07g019400
Sorghum bicolor
Sb07g019400
I
0.817
Sb08g005080
Sorghum bicolor
Sb08g005080
I
0.811
Si012735m.g
Setaria italica
Si012735m.g
I
0.816
Si015433m.g
Setaria italica
Si015433m.g
I
0.822
Si022702m.g
Setaria italica
Si022702m.g
I
0.824
Si030528m.g
Setaria italica
Si030528m.g
I
0.813
Si030531m.g
Setaria italica
Si030531m.g
I
0.811
Si036565m.g
Setaria italica
Si036565m.g
I
0.812
Solyc03g095770.2
Solanum lycopersicum
Solyc03g095770.2
I
0.819
Solyc05g050330.2
Solanum lycopersicum
Solyc05g050330.2
I
0.819
Solyc09g015770.2
Solanum lycopersicum
Solyc09g015770.2
I
0.839
TCM_019689
Theobroma cacao
TCM_019689
I
0.861
TCM_045556
Theobroma cacao
TCM_045556
I
0.837
Thhalv10006146m.g
Eutrema salsugineum
Thhalv10006146m.g
I
0.830
TRAES3BF051200110CFD_g
Triticum aestivum
TRAES3BF051200110CFD_g
I
0.812
Traes_2AS_6269D889E
Triticum aestivum
Traes_2AS_6269D889E
I
0.821
Traes_2BS_B65714572
Triticum aestivum
Traes_2BS_B65714572
I
0.823
Traes_3AL_6E92D4E1F
Triticum aestivum
Traes_3AL_6E92D4E1F
I
0.814
Traes_5BL_0A3D332A8
Triticum aestivum
Traes_5BL_0A3D332A8
I
0.816
Traes_5DL_C93641E43
Triticum aestivum
Traes_5DL_C93641E43
I
0.816
TRIUR3_26571
Triticum urartu
TRIUR3_26571
N
0.814
TRIUR3_29889
Triticum urartu
TRIUR3_29889
I
0.814
TRIUR3_30416
Triticum urartu
TRIUR3_30416
I
0.816
VIT_08s0058g01390
Vitis vinifera
VIT_08s0058g01390
I
0.834
VIT_13s0067g03140
Vitis vinifera
VIT_13s0067g03140
I
0.814