Cagra.15225s0001 (Capsella grandiflora)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Cagra.15225s0001 T355896_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY63
M02546_2.00 		Arabidopsis thaliana
NGGTCAAN
NTTGACCN		 PBM
Weirauch et al.(2014)
pTH8182 		0.875 0.847
WRKY38
M00901_2.00 		Arabidopsis thaliana
NNRGTCAACBN
NVGTTGACYNN		 PBM
Franco-Zorrilla et al.(2014)
WRKY38 		0.853 0.695
WRKY62
M02561_2.00 		Arabidopsis thaliana
TRGTCAAM
KTTGACYA		 PBM
Weirauch et al.(2014)
pTH8246 		0.847 0.627
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.15225s0001.1.p WRKY 106 166

Links

Other WRKY family TFs
Other Capsella grandiflora TFs

140 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA021487 Oryza indica BGIOSGA021487 N 0.000
mgf016587m Mimulus guttatus mgf016587m N 0.000
OB06G19370 Oryza brachyantha OB06G19370 N 0.000
OBART06G10160 Oryza barthii OBART06G10160 N 0.000
OGLUM06G11040 Oryza glumaepatula OGLUM06G11040 N 0.000
OMERI06G11830 Oryza meridionalis OMERI06G11830 N 0.000
ONIVA06G11770 Oryza nivara ONIVA06G11770 N 0.000
OPUNC06G09770 Oryza punctata OPUNC06G09770 N 0.000
ORGLA06G0095900 Oryza glaberrima ORGLA06G0095900 N 0.000
TGAL3 Oryza sativa OS06G0265400 N 0.000