Carubv10022162m.g (Capsella rubella)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Carubv10022162m.g T355982_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY63
M02546_2.00 		Arabidopsis thaliana
NGGTCAAN
NTTGACCN		 PBM
Weirauch et al.(2014)
pTH8182 		0.853 0.773
WRKY38
M00901_2.00 		Arabidopsis thaliana
NNRGTCAACBN
NVGTTGACYNN		 PBM
Franco-Zorrilla et al.(2014)
WRKY38 		0.835 0.614
WRKY62
M02561_2.00 		Arabidopsis thaliana
TRGTCAAM
KTTGACYA		 PBM
Weirauch et al.(2014)
pTH8246 		0.827 0.591
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10022162m WRKY 98 143

Links

Other WRKY family TFs
Other Capsella rubella TFs

121 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29005.m000265 Ricinus communis 29005.m000265 N 0.000
Ca_14339 Cicer arietinum Ca_14339 N 0.000
evm.TU.supercontig_29.114 Carica papaya evm.TU.supercontig_29.114 N 0.000
LjT29P04.60.nd Lotus japonicus LjT29P04.60.nd N 0.000
LjT39N06.120.nd Lotus japonicus LjT39N06.120.nd N 0.000
mgf023707m Mimulus guttatus mgf023707m N 0.000
MTR_5g078140 Medicago truncatula MTR_5g078140 I 0.000
Pavir.Fa00215 Panicum virgatum Pavir.Fa00215 N 0.000
SapurV1A.0531s0010 Salix purpurea SapurV1A.0531s0010 N 0.000
SELMODRAFT_39496 Selaginella moellendorffii SELMODRAFT_39496 N 0.000
SELMODRAFT_39499 Selaginella moellendorffii SELMODRAFT_39499 N 0.000
Si032487m.g Setaria italica Si032487m.g N 0.000
Traes_6DL_D1B5EA05F Triticum aestivum Traes_6DL_D1B5EA05F N 0.000