Carubv10027178m.g (Capsella rubella)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Carubv10027178m.g T356005_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY51
M02568_2.00 		Arabidopsis thaliana
NNRGTCAANN
NNTTGACYNN		 PBM
Weirauch et al.(2014)
pTH7478 		0.877 0.966
PK25870.1
M01325_2.00 		Cannabis sativa
NRGTCAAM
KTTGACYN		 PBM
Lambert et al.(2019)
pTH10156 		0.862 0.862
WRKY50
M07424_2.00 		Arabidopsis thaliana
NNAAAAGTCAAMN
NKTTGACTTTTNN		 Dap-seq
OMalley et al.(2016)
WRKY50_col_a 		0.823 0.724
WRKY50
M07425_2.00 		Arabidopsis thaliana
NWAAGTCAANN
NNTTGACTTWN		 Dap-seq
OMalley et al.(2016)
WRKY50_colamp_a 		0.823 0.724
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10027178m WRKY 110 167

Links

Other WRKY family TFs
Other Capsella rubella TFs

248 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29738.m001050 Ricinus communis 29738.m001050 I 0.000
AMTR_s00007p00238950 Amborella trichopoda AMTR_s00007p00238950 I 0.000
Aquca_002_01106 Aquilegia coerulea Aquca_002_01106 I 0.000
Aquca_026_00225 Aquilegia coerulea Aquca_026_00225 I 0.000
RAV1 Arabidopsis thaliana AT1G13260 D 0.000
RAV2 Arabidopsis thaliana AT1G68840 D 0.000
ARF14 Arabidopsis thaliana AT3G25730 D 0.000
BGIOSGA002747 Oryza indica BGIOSGA002747 I 0.000
BGIOSGA002748 Oryza indica BGIOSGA002748 I 0.000
BGIOSGA002753 Oryza indica BGIOSGA002753 I 0.000
BGIOSGA020315 Oryza indica BGIOSGA020315 I 0.000
Bo2g061320 Brassica oleracea Bo2g061320 I 0.000
Bo2g138650 Brassica oleracea Bo2g138650 I 0.000
Bo3g138550 Brassica oleracea Bo3g138550 I 0.000
Bo5g015210 Brassica oleracea Bo5g015210 I 0.000
Bo5g043120 Brassica oleracea Bo5g043120 I 0.000
Bostr.0556s0243 Boechera stricta Bostr.0556s0243 I 0.000
Bostr.10273s0485 Boechera stricta Bostr.10273s0485 I 0.000
Bostr.12659s0398 Boechera stricta Bostr.12659s0398 I 0.000
Bostr.13671s0120 Boechera stricta Bostr.13671s0120 I 0.000
Bra011002 Brassica rapa Bra011002 I 0.000
Bra019821 Brassica rapa Bra019821 I 0.000
Bra024735 Brassica rapa Bra024735 I 0.000
Bra026509 Brassica rapa Bra026509 I 0.000
Bra026917 Brassica rapa Bra026917 I 0.000
Bra038346 Brassica rapa Bra038346 I 0.000
BRADI2G02710 Brachypodium distachyon BRADI2G02710 I 0.000
BRADI2G02720 Brachypodium distachyon BRADI2G02720 I 0.000
BRADI2G17610 Brachypodium distachyon BRADI2G17610 I 0.000
BRADI2G47220 Brachypodium distachyon BRADI2G47220 I 0.000
Cagra.1157s0007 Capsella grandiflora Cagra.1157s0007 I 0.000
Cagra.3501s0173 Capsella grandiflora Cagra.3501s0173 I 0.000
Carubv10009612m.g Capsella rubella Carubv10009612m.g I 0.000
Carubv10019207m.g Capsella rubella Carubv10019207m.g I 0.000
Carubv10020536m.g Capsella rubella Carubv10020536m.g I 0.000
cassava12324.valid.m1 Manihot esculenta cassava12324.valid.m1 I 0.000
cassava43329.valid.m1 Manihot esculenta cassava43329.valid.m1 I 0.000
Ca_08436 Cicer arietinum Ca_08436 I 0.000
Ca_24123 Cicer arietinum Ca_24123 I 0.000
Ciclev10012300m.g Citrus clementina Ciclev10012300m.g I 0.000
Ciclev10031846m.g Citrus clementina Ciclev10031846m.g I 0.000
Cla000872 Citrullus lanatus Cla000872 I 0.000
Cla020675 Citrullus lanatus Cla020675 I 0.000
Cucsa.147340 Cucumis sativus Cucsa.147340 I 0.000
Cucsa.283870 Cucumis sativus Cucsa.283870 I 0.000
Eucgr.B03048 Eucalyptus grandis Eucgr.B03048 I 0.000
F775_20035 Aegilops tauschii F775_20035 N 0.000
RAV2 Arabidopsis lyrata fgenesh2_kg.2__1141__AT1G68840.1 I 0.000
EDF3 Arabidopsis lyrata fgenesh2_kg.5__327__AT3G25730.1 I 0.000
gene03871-v1.0-hybrid Fragaria vesca gene03871-v1.0-hybrid I 0.000
GLYMA01G22260 Glycine max GLYMA01G22260 I 0.000
GLYMA02G11060 Glycine max GLYMA02G11060 I 0.000
GLYMA10G34760 Glycine max GLYMA10G34760 I 0.000
GLYMA20G32730 Glycine max GLYMA20G32730 I 0.000
Gorai.005G138100 Gossypium raimondii Gorai.005G138100 I 0.000
Gorai.008G185900 Gossypium raimondii Gorai.008G185900 I 0.000
Gorai.013G080000 Gossypium raimondii Gorai.013G080000 I 0.000
GRMZM2G059939 Zea mays GRMZM2G059939 I 0.000
GRMZM2G159592 Zea mays GRMZM2G159592 I 0.000
GRMZM2G169654 Zea mays GRMZM2G169654 I 0.000
GSMUA_Achr1G05400_001 Musa acuminata GSMUA_Achr1G05400_001 I 0.000
GSMUA_Achr1G21250_001 Musa acuminata GSMUA_Achr1G21250_001 I 0.000
GSMUA_Achr2G22560_001 Musa acuminata GSMUA_Achr2G22560_001 I 0.000
GSMUA_Achr3G21100_001 Musa acuminata GSMUA_Achr3G21100_001 I 0.000
GSMUA_Achr4G06710_001 Musa acuminata GSMUA_Achr4G06710_001 I 0.000
GSMUA_Achr5G09950_001 Musa acuminata GSMUA_Achr5G09950_001 I 0.000
GSMUA_Achr6G01420_001 Musa acuminata GSMUA_Achr6G01420_001 I 0.000
GSMUA_Achr8G18260_001 Musa acuminata GSMUA_Achr8G18260_001 I 0.000
LPERR01G02360 Leersia perrieri LPERR01G02360 I 0.000
LPERR01G02380 Leersia perrieri LPERR01G02380 I 0.000
LPERR01G23470 Leersia perrieri LPERR01G23470 I 0.000
LPERR05G20600 Leersia perrieri LPERR05G20600 I 0.000
Lus10021707.g Linum usitatissimum Lus10021707.g I 0.000
Lus10041487.g Linum usitatissimum Lus10041487.g I 0.000
MDP0000128924 Malus domestica MDP0000128924 I 0.000
MDP0000939633 Malus domestica MDP0000939633 I 0.000
mgf019592m Mimulus guttatus mgf019592m I 0.000
MLOC_5512 Hordeum vulgare MLOC_5512 I 0.000
MLOC_56567 Hordeum vulgare MLOC_56567 I 0.000
MLOC_63261 Hordeum vulgare MLOC_63261 I 0.000
MLOC_75135 Hordeum vulgare MLOC_75135 I 0.000
MLOC_7940 Hordeum vulgare MLOC_7940 I 0.000
MTR_1g093600 Medicago truncatula MTR_1g093600 I 0.000
MTR_5g053920 Medicago truncatula MTR_5g053920 I 0.000
OB01G12600 Oryza brachyantha OB01G12600 I 0.000
OBART01G02610 Oryza barthii OBART01G02610 I 0.000
OBART01G27360 Oryza barthii OBART01G27360 I 0.000
OGLUM01G02850 Oryza glumaepatula OGLUM01G02850 I 0.000
OGLUM01G31260 Oryza glumaepatula OGLUM01G31260 I 0.000
OGLUM05G26380 Oryza glumaepatula OGLUM05G26380 I 0.000
OMERI01G02480 Oryza meridionalis OMERI01G02480 I 0.000
OMERI01G02500 Oryza meridionalis OMERI01G02500 I 0.000
OMERI01G25110 Oryza meridionalis OMERI01G25110 I 0.000
OMERI05G22110 Oryza meridionalis OMERI05G22110 I 0.000
ONIVA01G02970 Oryza nivara ONIVA01G02970 I 0.000
ONIVA01G02990 Oryza nivara ONIVA01G02990 I 0.000
ONIVA01G31290 Oryza nivara ONIVA01G31290 I 0.000
ONIVA05G26000 Oryza nivara ONIVA05G26000 I 0.000
OPUNC01G27280 Oryza punctata OPUNC01G27280 I 0.000
OPUNC05G22370 Oryza punctata OPUNC05G22370 I 0.000
orange1.1g017035m.g Citrus sinensis orange1.1g017035m.g I 0.000
orange1.1g021945m.g Citrus sinensis orange1.1g021945m.g I 0.000
ORGLA01G0022400 Oryza glaberrima ORGLA01G0022400 I 0.000
ORGLA01G0022600 Oryza glaberrima ORGLA01G0022600 I 0.000
ORGLA01G0225300 Oryza glaberrima ORGLA01G0225300 I 0.000
ORUFI01G02660 Oryza rufipogon ORUFI01G02660 I 0.000
ORUFI01G02680 Oryza rufipogon ORUFI01G02680 I 0.000
ORUFI01G30390 Oryza rufipogon ORUFI01G30390 I 0.000
OS01G0140700 Oryza sativa OS01G0140700 I 0.000
OS01G0141000 Oryza sativa OS01G0141000 I 0.000
OS01G0693400 Oryza sativa OS01G0693400 I 0.000
OS05G0549800 Oryza sativa OS05G0549800 I 0.000
Pavir.Ca01165 Panicum virgatum Pavir.Ca01165 I 0.000
Pavir.Ca01826 Panicum virgatum Pavir.Ca01826 I 0.000
Pavir.Ea00549 Panicum virgatum Pavir.Ea00549 I 0.000
Pavir.Ea02092 Panicum virgatum Pavir.Ea02092 I 0.000
Pavir.Eb00701 Panicum virgatum Pavir.Eb00701 I 0.000
Pavir.Eb00702 Panicum virgatum Pavir.Eb00702 I 0.000
Pavir.Eb02845 Panicum virgatum Pavir.Eb02845 I 0.000
Pavir.J00384 Panicum virgatum Pavir.J00384 I 0.000
Pavir.J13012 Panicum virgatum Pavir.J13012 I 0.000
Pavir.J23476 Panicum virgatum Pavir.J23476 I 0.000
PGSC0003DMG400000811 Solanum tuberosum PGSC0003DMG400000811 I 0.000
PK15652.1 Cannabis sativa PK15652.1 I 0.000
Pm015500 Prunus mume Pm015500 I 0.000
Pm029015 Prunus mume Pm029015 I 0.000
POPTR_0008s11600 Populus trichocarpa POPTR_0008s11600 I 0.000
POPTR_0010s13930 Populus trichocarpa POPTR_0010s13930 I 0.000
PRUPE_ppa006243mg Prunus persica PRUPE_ppa006243mg I 0.000
SapurV1A.0079s0450 Salix purpurea SapurV1A.0079s0450 I 0.000
SapurV1A.1001s0020 Salix purpurea SapurV1A.1001s0020 I 0.000
SapurV1A.3302s0010 Salix purpurea SapurV1A.3302s0010 I 0.000
Sb03g006590 Sorghum bicolor Sb03g006590 I 0.000
Sb03g031860 Sorghum bicolor Sb03g031860 I 0.000
Sb09g004140 Sorghum bicolor Sb09g004140 N 0.000
Sb09g027530 Sorghum bicolor Sb09g027530 I 0.000
RAV1 Arabidopsis lyrata scaffold_101479.1 I 0.000
TEM1 Arabidopsis lyrata scaffold_102941.1 I 0.000
SELMODRAFT_110104 Selaginella moellendorffii SELMODRAFT_110104 I 0.000
SELMODRAFT_133669 Selaginella moellendorffii SELMODRAFT_133669 I 0.000
Si001909m.g Setaria italica Si001909m.g I 0.000
Si004045m.g Setaria italica Si004045m.g I 0.000
Si024576m.g Setaria italica Si024576m.g I 0.000
Solyc04g007000.1 Solanum lycopersicum Solyc04g007000.1 I 0.000
Solyc05g009790.1 Solanum lycopersicum Solyc05g009790.1 I 0.000
TCM_011862 Theobroma cacao TCM_011862 I 0.000
Thhalv10004508m.g Eutrema salsugineum Thhalv10004508m.g I 0.000
Thhalv10007983m.g Eutrema salsugineum Thhalv10007983m.g I 0.000
Thhalv10010019m.g Eutrema salsugineum Thhalv10010019m.g I 0.000
Thhalv10019566m.g Eutrema salsugineum Thhalv10019566m.g I 0.000
TRAES3BF062600010CFD_g Triticum aestivum TRAES3BF062600010CFD_g I 0.000
TRAES3BF062700040CFD_g Triticum aestivum TRAES3BF062700040CFD_g I 0.000
TRAES3BF098200010CFD_g Triticum aestivum TRAES3BF098200010CFD_g I 0.000
TRAES3BF098300010CFD_g Triticum aestivum TRAES3BF098300010CFD_g I 0.000
TRAES3BF108500010CFD_g Triticum aestivum TRAES3BF108500010CFD_g I 0.000
Traes_3B_90BE2090B Triticum aestivum Traes_3B_90BE2090B I 0.000
Traes_3B_DF7E92499 Triticum aestivum Traes_3B_DF7E92499 I 0.000
Traes_3B_DF7E924991 Triticum aestivum Traes_3B_DF7E924991 I 0.000
TRIUR3_24851 Triticum urartu TRIUR3_24851 I 0.000
TRIUR3_27886 Triticum urartu TRIUR3_27886 I 0.000
VIT_01s0011g03070 Vitis vinifera VIT_01s0011g03070 I 0.000