gene13547-v1.0-hybrid (Fragaria vesca)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 gene13547-v1.0-hybrid T356210_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY70
M07399_2.00 		Arabidopsis thaliana
HAAAGTCAACGNN
NNCGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY70_col 		0.836 0.661
WRKY46
M07395_2.00 		Arabidopsis thaliana
VAAAGTCAAMG
CKTTGACTTTB		 Dap-seq
OMalley et al.(2016)
WRKY46_col_a 		0.814 0.593
WRKY46
M07396_2.00 		Arabidopsis thaliana
HRAAGTCAACG
CGTTGACTTYD		 Dap-seq
OMalley et al.(2016)
WRKY46_colamp_a 		0.814 0.593
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna13547.1-v1.0-hybrid WRKY 148 208

Links

Other WRKY family TFs
Other Fragaria vesca TFs

228 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_002_00170 Aquilegia coerulea Aquca_002_00170 I 0.000
Aquca_025_00333 Aquilegia coerulea Aquca_025_00333 I 0.000
GL1 Arabidopsis thaliana AT3G27920 I 0.000
WER Arabidopsis thaliana AT5G14750 D 0.000
MYB23 Arabidopsis thaliana AT5G40330 D 0.000
Bo2g012170 Brassica oleracea Bo2g012170 I 0.000
Bo7g090950 Brassica oleracea Bo7g090950 I 0.000
Bo9g165670 Brassica oleracea Bo9g165670 I 0.000
Bostr.0556s0467 Boechera stricta Bostr.0556s0467 I 0.000
Bostr.1460s0063 Boechera stricta Bostr.1460s0063 I 0.000
Bostr.2902s0211 Boechera stricta Bostr.2902s0211 I 0.000
Bostr.7200s0005 Boechera stricta Bostr.7200s0005 I 0.000
Bra008740 Brassica rapa Bra008740 I 0.000
Bra023486 Brassica rapa Bra023486 I 0.000
Bra025311 Brassica rapa Bra025311 I 0.000
Bra025589 Brassica rapa Bra025589 I 0.000
Bra039065 Brassica rapa Bra039065 I 0.000
Cagra.3160s0003 Capsella grandiflora Cagra.3160s0003 I 0.000
Cagra.3166s0078 Capsella grandiflora Cagra.3166s0078 I 0.000
Cagra.4961s0006 Capsella grandiflora Cagra.4961s0006 I 0.000
Carubv10001990m.g Capsella rubella Carubv10001990m.g I 0.000
Carubv10005698m.g Capsella rubella Carubv10005698m.g I 0.000
cassava26193.m1 Manihot esculenta cassava26193.m1 I 0.000
cassava27350.m1 Manihot esculenta cassava27350.m1 I 0.000
Ciclev10017556m.g Citrus clementina Ciclev10017556m.g I 0.000
Ciclev10032713m.g Citrus clementina Ciclev10032713m.g I 0.000
Eucgr.B00373 Eucalyptus grandis Eucgr.B00373 I 0.000
Eucgr.I01791 Eucalyptus grandis Eucgr.I01791 I 0.000
Eucgr.J02212 Eucalyptus grandis Eucgr.J02212 I 0.000
evm.TU.supercontig_124.57 Carica papaya evm.TU.supercontig_124.57 I 0.000
evm.TU.supercontig_46.32 Carica papaya evm.TU.supercontig_46.32 I 0.000
GL1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5000559 I 0.000
WER Arabidopsis lyrata fgenesh2_kg.6__1454__AT5G14750.1 I 0.000
gene31098-v1.0-hybrid Fragaria vesca gene31098-v1.0-hybrid I 0.000
Gorai.007G001800 Gossypium raimondii Gorai.007G001800 I 0.000
Gorai.012G061800 Gossypium raimondii Gorai.012G061800 I 0.000
LjT16O05.150.nd Lotus japonicus LjT16O05.150.nd I 0.000
MDP0000164048 Malus domestica MDP0000164048 I 0.000
MDP0000199965 Malus domestica MDP0000199965 I 0.000
MDP0000537324 Malus domestica MDP0000537324 I 0.000
MDP0000578193 Malus domestica MDP0000578193 I 0.000
MDP0000650225 Malus domestica MDP0000650225 I 0.000
mgf023205m Mimulus guttatus mgf023205m I 0.000
orange1.1g047269m.g Citrus sinensis orange1.1g047269m.g I 0.000
Pm006678 Prunus mume Pm006678 I 0.000
Pm024725 Prunus mume Pm024725 I 0.000
POPTR_0012s08190 Populus trichocarpa POPTR_0012s08190 I 0.000
POPTR_0015s08680 Populus trichocarpa POPTR_0015s08680 I 0.000
PRUPE_ppa010908mg Prunus persica PRUPE_ppa010908mg I 0.000
PRUPE_ppa014884mg Prunus persica PRUPE_ppa014884mg I 0.000
SapurV1A.1178s0050 Salix purpurea SapurV1A.1178s0050 I 0.000
SapurV1A.1404s0020 Salix purpurea SapurV1A.1404s0020 I 0.000
TCM_010360 Theobroma cacao TCM_010360 I 0.000
TCM_012057 Theobroma cacao TCM_012057 I 0.000
TCM_016886 Theobroma cacao TCM_016886 I 0.000
Thhalv10005428m.g Eutrema salsugineum Thhalv10005428m.g I 0.000
Thhalv10014715m.g Eutrema salsugineum Thhalv10014715m.g I 0.000
Thhalv10028340m.g Eutrema salsugineum Thhalv10028340m.g I 0.000
VIT_01s0127g00730 Vitis vinifera VIT_01s0127g00730 I 0.000
VIT_14s0066g01220 Vitis vinifera VIT_14s0066g01220 I 0.000
VIT_17s0000g08480 Vitis vinifera VIT_17s0000g08480 I 0.000