Thhalv10015295m.g (Eutrema salsugineum)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Thhalv10015295m.g T357022_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY38
M00901_2.00 		Arabidopsis thaliana
NNRGTCAACBN
NVGTTGACYNN		 PBM
Franco-Zorrilla et al.(2014)
WRKY38 		0.858 0.881
WRKY63
M02546_2.00 		Arabidopsis thaliana
NGGTCAAN
NTTGACCN		 PBM
Weirauch et al.(2014)
pTH8182 		0.846 0.712
WRKY62
M02561_2.00 		Arabidopsis thaliana
TRGTCAAM
KTTGACYA		 PBM
Weirauch et al.(2014)
pTH8246 		0.840 0.661
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10015295m WRKY 39 99

Links

Other WRKY family TFs
Other Eutrema salsugineum TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Al_scaffold_0002_1233 Arabidopsis lyrata Al_scaffold_0002_1233 I 0.854
WRKY62 Arabidopsis lyrata Al_scaffold_0006_13 I 0.840
WRKY67 Arabidopsis thaliana AT1G66550 I 0.850
WRKY64 Arabidopsis thaliana AT1G66560 I 0.849
WRKY63 Arabidopsis thaliana AT1G66600 D 0.846
WRKY66 Arabidopsis thaliana AT1G80590 I 0.854
WRKY62 Arabidopsis thaliana AT5G01900 D 0.840
WRKY38 Arabidopsis thaliana AT5G22570 D 0.858
BGIOSGA017556 Oryza indica BGIOSGA017556 I 0.810
Bo01002s040 Brassica oleracea Bo01002s040 I 0.855
Bo2g024040 Brassica oleracea Bo2g024040 I 0.868
Bo2g095820 Brassica oleracea Bo2g095820 I 0.828
Bo5g068250 Brassica oleracea Bo5g068250 I 0.842
Bostr.20129s0455 Boechera stricta Bostr.20129s0455 I 0.830
Bostr.25463s0359 Boechera stricta Bostr.25463s0359 I 0.832
Bostr.26527s0018 Boechera stricta Bostr.26527s0018 I 0.874
Bostr.26959s0259 Boechera stricta Bostr.26959s0259 I 0.819
Bostr.26959s0261 Boechera stricta Bostr.26959s0261 I 0.836
Bostr.26959s0262 Boechera stricta Bostr.26959s0262 I 0.856
Bostr.5022s0087 Boechera stricta Bostr.5022s0087 I 0.825
Bostr.6251s0160 Boechera stricta Bostr.6251s0160 I 0.842
Bra002421 Brassica rapa Bra002421 I 0.855
Bra008454 Brassica rapa Bra008454 I 0.832
Bra008456 Brassica rapa Bra008456 I 0.818
Bra008459 Brassica rapa Bra008459 I 0.828
Bra020196 Brassica rapa Bra020196 I 0.869
Bra020197 Brassica rapa Bra020197 I 0.868
Bra023211 Brassica rapa Bra023211 I 0.842
Bra028918 Brassica rapa Bra028918 I 0.841
Cagra.0255s0014 Capsella grandiflora Cagra.0255s0014 I 0.845
Cagra.15225s0001 Capsella grandiflora Cagra.15225s0001 I 0.858
Cagra.20277s0001 Capsella grandiflora Cagra.20277s0001 I 0.811
Cagra.8153s0001 Capsella grandiflora Cagra.8153s0001 I 0.866
Carubv10002472m.g Capsella rubella Carubv10002472m.g I 0.866
Carubv10012720m.g Capsella rubella Carubv10012720m.g I 0.845
Carubv10021420m.g Capsella rubella Carubv10021420m.g I 0.858
Carubv10021860m.g Capsella rubella Carubv10021860m.g I 0.840
Carubv10021899m.g Capsella rubella Carubv10021899m.g I 0.836
Carubv10022120m.g Capsella rubella Carubv10022120m.g I 0.828
Carubv10022162m.g Capsella rubella Carubv10022162m.g I 0.838
Ca_18932 Cicer arietinum Ca_18932 I 0.820
Cucsa.177060 Cucumis sativus Cucsa.177060 I 0.809
Eucgr.K01289 Eucalyptus grandis Eucgr.K01289 I 0.812
evm.TU.supercontig_86.64 Carica papaya evm.TU.supercontig_86.64 I 0.816
evm.TU.supercontig_86.65 Carica papaya evm.TU.supercontig_86.65 I 0.813
WRKY67 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000969 I 0.847
gene13547-v1.0-hybrid Fragaria vesca gene13547-v1.0-hybrid I 0.808
GSMUA_Achr8G25110_001 Musa acuminata GSMUA_Achr8G25110_001 I 0.818
LPERR05G06630 Leersia perrieri LPERR05G06630 I 0.813
LPERR05G16170 Leersia perrieri LPERR05G16170 I 0.808
mgf002542m Mimulus guttatus mgf002542m I 0.812
mgf009193m Mimulus guttatus mgf009193m I 0.810
MTR_8g005750 Medicago truncatula MTR_8g005750 I 0.818
OB05G17240 Oryza brachyantha OB05G17240 I 0.817
OBART05G08130 Oryza barthii OBART05G08130 I 0.810
OGLUM05G08540 Oryza glumaepatula OGLUM05G08540 I 0.810
OLONG_019907 Oryza longistaminata OLONG_019907 I 0.810
ONIVA05G08650 Oryza nivara ONIVA05G08650 I 0.810
OPUNC05G07410 Oryza punctata OPUNC05G07410 I 0.810
ORGLA05G0070000 Oryza glaberrima ORGLA05G0070000 I 0.810
ORUFI05G08750 Oryza rufipogon ORUFI05G08750 I 0.810
Pavir.Ca00459 Panicum virgatum Pavir.Ca00459 I 0.816
Pm003014 Prunus mume Pm003014 I 0.810
PRUPE_ppa020736mg Prunus persica PRUPE_ppa020736mg I 0.810
WRKY38 Arabidopsis lyrata scaffold_602308.1 I 0.858
Thhalv10000686m.g Eutrema salsugineum Thhalv10000686m.g I 0.828
Thhalv10014700m.g Eutrema salsugineum Thhalv10014700m.g I 0.840
Thhalv10029232m.g Eutrema salsugineum Thhalv10029232m.g I 0.824
VIT_08s0058g01390 Vitis vinifera VIT_08s0058g01390 I 0.813