CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_01960
(
Verticillium albo atrum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
VDBG_01960
T357955_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HCBG_05620
M02579_2.00
Histoplasma capsulatum
NNNCGGNHNN
NNDNCCGNNN
PBM
Weirauch et al.(2014)
pTH8594
0.569
0.675
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_01960T0
Zinc cluster
189
232
IACRYCRKRKIRCSGYQSAPGGKCVNCSRMNQECIFQPVSSSSS
Links
Other
Zinc cluster
family TFs
Other
Verticillium albo atrum
TFs
91 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AOL_s00004g648
Arthrobotrys oligospora
AOL_s00004g648
I
0.569
ARB_01992
Arthroderma benhamiae
ARB_01992
I
0.569
AUEXF2481DRAFT_8523
Aureobasidium subglaciale
AUEXF2481DRAFT_8523
I
0.593
BBA_07683
Beauveria bassiana
BBA_07683
I
0.642
BDDG_07136
Blastomyces dermatitidis
BDDG_07136
I
0.569
BGHDH14_bgh05211
Blumeria graminis
BGHDH14_bgh05211
I
0.569
ACLA_098160
Aspergillus clavatus
CADACLAG00009206
I
0.569
CADAFLAG00008794
Aspergillus flavus
CADAFLAG00008794
I
0.569
AFUA_6G02330
Aspergillus fumigatus
CADAFUAG00000640
I
0.569
CADANGAG00010285
Aspergillus niger
CADANGAG00010285
I
0.569
ATEG_07219
Aspergillus terreus
CADATEAG00001089
I
0.569
NFIA_048590
Neosartorya fischeri
CADNFIAG00005471
I
0.569
CCM_06477
Cordyceps militaris
CCM_06477
I
0.642
CFIO01_13219
Colletotrichum fioriniae
CFIO01_13219
I
0.683
CGGC5_3218
Colletotrichum gloeosporioides
CGGC5_3218
I
0.683
CH063_09116
Colletotrichum higginsianum
CH063_09116
I
0.683
CHGG_06618
Chaetomium globosum
CHGG_06618
I
0.572
CIMG_05854
Coccidioides immitis
CIMG_05854
I
0.539
Cob_13124
Colletotrichum orbiculare
Cob_13124
I
0.683
CPC735_024740
Coccidioides posadasii
CPC735_024740
I
0.539
CSUB01_08239
Colletotrichum sublineola
CSUB01_08239
I
0.683
CTHT_0011610
Chaetomium thermophilum
CTHT_0011610
I
0.572
DOTSEDRAFT_68063
Dothistroma septosporum
DOTSEDRAFT_68063
I
0.546
DRE_07643
Drechslerella stenobrocha
DRE_07643
I
0.617
estExt_fgenesh1_pg.C_chr_40524
Mycosphaerella graminicola
estExt_fgenesh1_pg.C_chr_40524
I
0.546
EURHEDRAFT_452525
Aspergillus ruber
EURHEDRAFT_452525
I
0.569
EV44_g6223
Erysiphe necator
EV44_g6223
I
0.569
e_gw1.2.1505.1
Nectria haematococca
e_gw1.2.1505.1
I
0.642
FFUJ_05647
Fusarium fujikuroi
FFUJ_05647
I
0.642
fgenesh1_pm.00855_#_114
Aspergillus carbonarius
fgenesh1_pm.00855_#_114
I
0.569
FGRRES_08924
Fusarium graminearum
FGRRES_08924
I
0.633
FOXG_03656
Fusarium oxysporum
FOXG_03656
I
0.642
FOXG_12523
Fusarium oxysporum
FOXG_12523
I
0.620
FOXG_14016
Fusarium oxysporum
FOXG_14016
I
0.620
FPSE_08907
Fusarium pseudograminearum
FPSE_08907
I
0.633
FVEG_02531
Fusarium verticillioides
FVEG_02531
I
0.642
GGTG_04916
Gaeumannomyces graminis
GGTG_04916
I
0.599
GLRG_04619
Colletotrichum graminicola
GLRG_04619
I
0.683
GMDG_06896
Pseudogymnoascus destructans
GMDG_06896
I
0.569
GSTUM_00012177001
Tuber melanosporum
GSTUM_00012177001
I
0.569
H072_5617
Dactylellina haptotyla
H072_5617
I
0.569
H101_06341
Trichophyton interdigitale
H101_06341
I
0.569
H102_07503
Trichophyton rubrum
H102_07503
I
0.569
H105_07531
Trichophyton soudanense
H105_07531
I
0.569
HCBG_05620
Histoplasma capsulatum
HCBG_05620
D
0.569
M437DRAFT_72508
Aureobasidium melanogenum
M437DRAFT_72508
I
0.593
M438DRAFT_354465
Aureobasidium pullulans
M438DRAFT_354465
I
0.593
MAJ_08136
Metarhizium majus
MAJ_08136
I
0.642
MANI_021400
Metarhizium anisopliae
MANI_021400
I
0.642
MAPG_10394
Magnaporthe poae
MAPG_10394
I
0.599
MBR_06549
Metarhizium brunneum
MBR_06549
I
0.642
MCYG_00576
Microsporum canis
MCYG_00576
I
0.569
MCYG_00576
Arthroderma otae
MCYG_00576
I
0.569
MGU_10186
Metarhizium guizhouense
MGU_10186
I
0.642
MGYG_01386
Microsporum gypseum
MGYG_01386
I
0.569
MPH_04742
Macrophomina phaseolina
MPH_04742
I
0.546
MYCFIDRAFT_89500
Pseudocercospora fijiensis
MYCFIDRAFT_89500
I
0.546
Mycgr3G109237
Zymoseptoria tritici
Mycgr3G109237
I
0.546
MYCTH_2310857
Myceliophthora thermophila
MYCTH_2310857
I
0.572
NechaG36533
Fusarium solani
NechaG36533
I
0.642
OIDMADRAFT_116523
Oidiodendron maius
OIDMADRAFT_116523
I
0.569
PABG_06482
Paracoccidioides brasiliensis
PABG_06482
I
0.569
PDE_03379
Penicillium oxalicum
PDE_03379
I
0.539
PDIP_61980
Penicillium digitatum
PDIP_61980
I
0.547
PEX1_027650
Penicillium expansum
PEX1_027650
I
0.547
PFICI_02807
Pestalotiopsis fici
PFICI_02807
I
0.568
PITC_053720
Penicillium italicum
PITC_053720
I
0.547
PMAA_018530
Penicillium marneffei
PMAA_018530
I
0.569
PMAA_018530
Talaromyces marneffei
PMAA_018530
I
0.569
PODANS_1_20900
Podospora anserina
PODANS_1_20900
I
0.572
PV09_00253
Verruconis gallopava
PV09_00253
I
0.546
PVAR5_6560
Byssochlamys spectabilis
PVAR5_6560
I
0.569
SAPIO_CDS5089
Scedosporium apiospermum
SAPIO_CDS5089
I
0.650
SEPMUDRAFT_146422
Sphaerulina musiva
SEPMUDRAFT_146422
I
0.546
synt_with_mycgr.1__94
Mycosphaerella fijiensis
synt_with_mycgr.1__94
I
0.546
TEQG_05447
Trichophyton equinum
TEQG_05447
I
0.569
TESG_05799
Trichophyton tonsurans
TESG_05799
I
0.569
THITE_2111441
Thielavia terrestris
THITE_2111441
I
0.572
TRIATDRAFT_35002
Trichoderma atroviride
TRIATDRAFT_35002
I
0.642
TRIREDRAFT_76872
Trichoderma reesei
TRIREDRAFT_76872
I
0.642
TRIVIDRAFT_126611
Trichoderma virens
TRIVIDRAFT_126611
I
0.642
TSTA_026540
Talaromyces stipitatus
TSTA_026540
I
0.569
U727_00433250161
Penicillium solitum
U727_00433250161
I
0.547
UCRNP2_2338
Neofusicoccum parvum
UCRNP2_2338
I
0.546
UV8b_4663
Ustilaginoidea virens
UV8b_4663
I
0.642
V499_05047
Pseudogymnoascus pannorum
V499_05047
I
0.569
VDAG_10326
Verticillium dahliae
VDAG_10326
I
0.683
VDBG_01960
Verticillium alfalfae
VDBG_01960
I
0.683
W97_05539
Coniosporium apollinis
W97_05539
I
0.546
X797_010723
Metarhizium robertsii
X797_010723
I
0.642
YALI0_F15037g
Yarrowia lipolytica
YALI0_F15037g
I
0.571