CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CMQ_6311
(
Grosmannia clavigera
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
CMQ_6311
T364222_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU01243
M02588_2.00
Neurospora crassa
NNNSCGN
NCGSNNN
PBM
Weirauch et al.(2014)
pTH8917
0.544
0.939
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFX01369
Zinc cluster
874
909
RCQRCRKSKKGCDRQRPCGRCRDAGIPAELCISEDE
Links
Other
Zinc cluster
family TFs
Other
Grosmannia clavigera
TFs
130 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA021813
Oryza indica
BGIOSGA021813
N
F775_23221
Aegilops tauschii
F775_23221
N
LPERR06G04380
Leersia perrieri
LPERR06G04380
N
LPERR10G06550
Leersia perrieri
LPERR10G06550
N
MLOC_10707
Hordeum vulgare
MLOC_10707
N
OB06G14480
Oryza brachyantha
OB06G14480
N
OBART06G04880
Oryza barthii
OBART06G04880
N
ONIVA06G15050
Oryza nivara
ONIVA06G15050
N
OPUNC06G04630
Oryza punctata
OPUNC06G04630
N
ORGLA06G0044400
Oryza glaberrima
ORGLA06G0044400
N
Pavir.Ca01208
Panicum virgatum
Pavir.Ca01208
N
Traes_1AL_FF8F7A939
Triticum aestivum
Traes_1AL_FF8F7A939
N