CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cob_13124
(
Colletotrichum orbiculare
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
Cob_13124
T364555_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HCBG_05620
M02579_2.00
Histoplasma capsulatum
NNNCGGNHNN
NNDNCCGNNN
PBM
Weirauch et al.(2014)
pTH8594
0.569
0.675
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENH77706
Zinc cluster
163
206
IACRYCRKRKIRCSGYQSAPGGKCVNCSRMNQECIFQPVSSSSS
Links
Other
Zinc cluster
family TFs
Other
Colletotrichum orbiculare
TFs
91 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
16480_YMR213W
Saccharomyces paradoxus
16480_YMR213W
N
17212_YMR213W
Saccharomyces mikatae
17212_YMR213W
N
19101_YMR213W
Saccharomyces bayanus
19101_YMR213W
N
CAGL0F03751g
Candida glabrata
CAGL0F03751g
N
KAFR_0B03230
Kazachstania africana
KAFR_0B03230
N
KLTH0D12452g
Lachancea thermotolerans
KLTH0D12452g
N
KLTH0D12452g
Kluyveromyces thermotolerans
KLTH0D12452g
N
Kwal_9014
Kluyveromyces waltii
Kwal_9014
N
LALA0_S01e04984g
Lachancea lanzarotensis
LALA0_S01e04984g
N
NCAS_0C01050
Naumovozyma castellii
NCAS_0C01050
N
NDAI_0K01050
Naumovozyma dairenensis
NDAI_0K01050
N
SAKL0H05302g
Lachancea kluyveri
SAKL0H05302g
N
TDEL_0B03810
Torulaspora delbrueckii
TDEL_0B03810
N
TPHA_0G01400
Tetrapisispora phaffii
TPHA_0G01400
N
ZBAI_00661
Zygosaccharomyces bailii
ZBAI_00661
N
ZYRO0F09526g
Zygosaccharomyces rouxii
ZYRO0F09526g
N