CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MYCTH_2302011
(
Myceliophthora thermophila
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
MYCTH_2302011
T375314_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
tah-3
M02601_2.00
Neurospora crassa
NYCGKRHN
NDYMCGRN
PBM
Weirauch et al.(2014)
pTH8887
0.594
0.897
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AEO56754
Zinc cluster
18
56
KGCDTCKRRHIRCDENFPQCRNCTKHKIRCPYNDVPVPE
Links
Other
Zinc cluster
family TFs
Other
Myceliophthora thermophila
TFs
70 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00017p00086440
Amborella trichopoda
AMTR_s00017p00086440
I
0.000
Aquca_017_00778
Aquilegia coerulea
Aquca_017_00778
I
0.000
STOP1
Arabidopsis thaliana
AT1G34370
D
0.000
BGIOSGA004888
Oryza indica
BGIOSGA004888
I
0.000
Bo8g027000
Brassica oleracea
Bo8g027000
I
0.000
Bostr.1040s0032
Boechera stricta
Bostr.1040s0032
I
0.000
Bra040971
Brassica rapa
Bra040971
I
0.000
BRADI2G56320
Brachypodium distachyon
BRADI2G56320
I
0.000
Cagra.12398s0002
Capsella grandiflora
Cagra.12398s0002
I
0.000
Carubv10008876m.g
Capsella rubella
Carubv10008876m.g
I
0.000
cassava22193.valid.m1
Manihot esculenta
cassava22193.valid.m1
I
0.000
cassava24483.valid.m1
Manihot esculenta
cassava24483.valid.m1
I
0.000
Ca_04300
Cicer arietinum
Ca_04300
I
0.000
Ciclev10000850m.g
Citrus clementina
Ciclev10000850m.g
I
0.000
Cla016623
Citrullus lanatus
Cla016623
I
0.000
Cucsa.079940
Cucumis sativus
Cucsa.079940
I
0.000
Eucgr.F02627
Eucalyptus grandis
Eucgr.F02627
I
0.000
F775_04088
Aegilops tauschii
F775_04088
I
0.000
STOP1
Arabidopsis lyrata
fgenesh2_kg.1__3547__AT1G34370.2
I
0.000
gene27486-v1.0-hybrid
Fragaria vesca
gene27486-v1.0-hybrid
I
0.000
GLYMA10G35940
Glycine max
GLYMA10G35940
I
0.000
GLYMA16G27280
Glycine max
GLYMA16G27280
I
0.000
GLYMA20G31650
Glycine max
GLYMA20G31650
I
0.000
Gorai.006G131700
Gossypium raimondii
Gorai.006G131700
I
0.000
GRMZM2G075956
Zea mays
GRMZM2G075956
I
0.000
GRMZM2G129428
Zea mays
GRMZM2G129428
I
0.000
GSMUA_Achr10G15970_001
Musa acuminata
GSMUA_Achr10G15970_001
I
0.000
GSMUA_Achr5G01170_001
Musa acuminata
GSMUA_Achr5G01170_001
I
0.000
LPERR01G33350
Leersia perrieri
LPERR01G33350
I
0.000
Lus10009435.g
Linum usitatissimum
Lus10009435.g
I
0.000
MDP0000141403
Malus domestica
MDP0000141403
I
0.000
MDP0000199559
Malus domestica
MDP0000199559
I
0.000
MDP0000453148
Malus domestica
MDP0000453148
I
0.000
MDP0000551046
Malus domestica
MDP0000551046
I
0.000
MDP0000807856
Malus domestica
MDP0000807856
I
0.000
mgf000060m
Mimulus guttatus
mgf000060m
I
0.000
MLOC_10987
Hordeum vulgare
MLOC_10987
I
0.000
OB01G47470
Oryza brachyantha
OB01G47470
I
0.000
OBART01G38810
Oryza barthii
OBART01G38810
I
0.000
OLONG_020555
Oryza longistaminata
OLONG_020555
I
0.000
ONIVA01G43630
Oryza nivara
ONIVA01G43630
I
0.000
OPUNC01G37530
Oryza punctata
OPUNC01G37530
I
0.000
orange1.1g009831m.g
Citrus sinensis
orange1.1g009831m.g
I
0.000
ORGLA01G0326400
Oryza glaberrima
ORGLA01G0326400
I
0.000
ORUFI01G42150
Oryza rufipogon
ORUFI01G42150
I
0.000
OS01G0871200
Oryza sativa
OS01G0871200
I
0.000
Pavir.J06328
Panicum virgatum
Pavir.J06328
I
0.000
Pavir.J12018
Panicum virgatum
Pavir.J12018
I
0.000
Pavir.J14096
Panicum virgatum
Pavir.J14096
I
0.000
PGSC0003DMG400009234
Solanum tuberosum
PGSC0003DMG400009234
I
0.000
PK23301.1
Cannabis sativa
PK23301.1
I
0.000
Pm022201
Prunus mume
Pm022201
I
0.000
POPTR_0019s11520
Populus trichocarpa
POPTR_0019s11520
I
0.000
PRUPE_ppa004510mg
Prunus persica
PRUPE_ppa004510mg
I
0.000
SapurV1A.0287s0150
Salix purpurea
SapurV1A.0287s0150
I
0.000
SapurV1A.2334s0030
Salix purpurea
SapurV1A.2334s0030
I
0.000
Sb03g041170
Sorghum bicolor
Sb03g041170
I
0.000
Si001053m.g
Setaria italica
Si001053m.g
I
0.000
Solyc11g017140.1
Solanum lycopersicum
Solyc11g017140.1
I
0.000
TCM_036719
Theobroma cacao
TCM_036719
I
0.000
Thhalv10007411m.g
Eutrema salsugineum
Thhalv10007411m.g
I
0.000
TRAES3BF044200110CFD_g
Triticum aestivum
TRAES3BF044200110CFD_g
I
0.000
Traes_3AL_00FAACD5D
Triticum aestivum
Traes_3AL_00FAACD5D
I
0.000
Traes_3DL_0284E68CC1
Triticum aestivum
Traes_3DL_0284E68CC1
I
0.000
TRIUR3_13796
Triticum urartu
TRIUR3_13796
I
0.000
STOP1
Vitis vinifera
VIT_18s0072g00840
I
0.000