CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MYCTH_2303722
(
Myceliophthora thermophila
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
MYCTH_2303722
T375318_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
vad-3
M02614_2.00
Neurospora crassa
NNNCGGCANWT
AWNTGCCGNNN
PBM
Weirauch et al.(2014)
pTH7811
0.683
1.000
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AEO57500
Zinc cluster
199
237
LACIACRRKKIRCSGEKPACKHCLRSRIPCVYKVTARKA
Links
Other
Zinc cluster
family TFs
Other
Myceliophthora thermophila
TFs
152 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SUF4
Arabidopsis thaliana
AT1G30970
N
Bo2g121020
Brassica oleracea
Bo2g121020
N
Bo5g065610
Brassica oleracea
Bo5g065610
N
Bostr.15697s0404
Boechera stricta
Bostr.15697s0404
N
Bra023153
Brassica rapa
Bra023153
N
Bra039880
Brassica rapa
Bra039880
N
SUF4
Arabidopsis lyrata
fgenesh2_kg.1__3297__AT1G30970.1
N
GRMZM2G081812
Zea mays
GRMZM2G081812
N
maker-pag1_scaffold_112-snap-gene-0.15
Pythium aphanidermatum
maker-pag1_scaffold_112-snap-gene-0.15
N
Pavir.Ba01662
Panicum virgatum
Pavir.Ba01662
N
Pavir.J03264
Panicum virgatum
Pavir.J03264
N
PK05604.1
Cannabis sativa
PK05604.1
N
Sb02g032810
Sorghum bicolor
Sb02g032810
N
Si030356m.g
Setaria italica
Si030356m.g
N
Solyc02g032120.2
Solanum lycopersicum
Solyc02g032120.2
N
Thhalv10008022m.g
Eutrema salsugineum
Thhalv10008022m.g
N