VHEMI03709 (Torrubiella hemipterigena)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 VHEMI03709 T387712_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU02576
M02597_2.00 		Neurospora crassa
NNNCGGVN
NBCCGNNN		 PBM
Weirauch et al.(2014)
pTH9668 		0.681 0.857
Bcin05g07400
M02571_2.00 		Botrytis cinerea
NNNCGGNN
NNCCGNNN		 PBM
Weirauch et al.(2014)
pTH8348 		0.626 0.829
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CEJ85232 Zinc cluster 61 99
CEJ85234 Zinc cluster 61 99

Links

Other Zinc cluster family TFs
Other Torrubiella hemipterigena TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29738.m001041 Ricinus communis 29738.m001041 I 0.000
30167.m000856 Ricinus communis 30167.m000856 I 0.000
30174.m008721 Ricinus communis 30174.m008721 I 0.000
Aquca_002_01093 Aquilegia coerulea Aquca_002_01093 I 0.000
Aquca_026_00208 Aquilegia coerulea Aquca_026_00208 I 0.000
TCP1 Arabidopsis thaliana AT1G67260 D 0.000
BRC2 Arabidopsis thaliana AT1G68800 I 0.000
Bo2g055640 Brassica oleracea Bo2g055640 I 0.000
Bo2g061250 Brassica oleracea Bo2g061250 I 0.000
Bo6g099040 Brassica oleracea Bo6g099040 I 0.000
Bo6g103670 Brassica oleracea Bo6g103670 I 0.000
Bostr.26959s0002 Boechera stricta Bostr.26959s0002 I 0.000
Bostr.26959s0184 Boechera stricta Bostr.26959s0184 I 0.000
Bra004097 Brassica rapa Bra004097 I 0.000
Bra004212 Brassica rapa Bra004212 I 0.000
Bra034010 Brassica rapa Bra034010 I 0.000
Bra038350 Brassica rapa Bra038350 I 0.000
Cagra.1125s0016 Capsella grandiflora Cagra.1125s0016 I 0.000
Cagra.1157s0001 Capsella grandiflora Cagra.1157s0001 I 0.000
Carubv10020487m.g Capsella rubella Carubv10020487m.g I 0.000
Carubv10020555m.g Capsella rubella Carubv10020555m.g I 0.000
cassava10552.m1 Manihot esculenta cassava10552.m1 I 0.000
cassava16230.m1 Manihot esculenta cassava16230.m1 I 0.000
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.000
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.000
chr1.LjB10L14.10.nc Lotus japonicus chr1.LjB10L14.10.nc I 0.000
chr2.LjB17A04.40.nc Lotus japonicus chr2.LjB17A04.40.nc I 0.000
chr5.CM0357.550.nc Lotus japonicus chr5.CM0357.550.nc I 0.000
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.000
Cla002355 Citrullus lanatus Cla002355 I 0.000
Cla007227 Citrullus lanatus Cla007227 I 0.000
Cla016709 Citrullus lanatus Cla016709 I 0.000
Cla019282 Citrullus lanatus Cla019282 N 0.000
Cucsa.031600 Cucumis sativus Cucsa.031600 I 0.000
Cucsa.238090 Cucumis sativus Cucsa.238090 I 0.000
Cucsa.280880 Cucumis sativus Cucsa.280880 I 0.000
Cucsa.283930 Cucumis sativus Cucsa.283930 I 0.000
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.000
Eucgr.J01466 Eucalyptus grandis Eucgr.J01466 I 0.000
Eucgr.K02654 Eucalyptus grandis Eucgr.K02654 I 0.000
evm.TU.supercontig_13.48 Carica papaya evm.TU.supercontig_13.48 N 0.000
evm.TU.supercontig_1401.1 Carica papaya evm.TU.supercontig_1401.1 I 0.000
evm.TU.supercontig_179.29 Carica papaya evm.TU.supercontig_179.29 I 0.000
TCP1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001059 I 0.000
BRC2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000933 I 0.000
gene03882-v1.0-hybrid Fragaria vesca gene03882-v1.0-hybrid I 0.000
GLYMA04G22407 Glycine max GLYMA04G22407 I 0.000
GLYMA05G07943 Glycine max GLYMA05G07943 I 0.000
GLYMA08G28691 Glycine max GLYMA08G28691 I 0.000
GLYMA10G39141 Glycine max GLYMA10G39141 I 0.000
GLYMA13G07475 Glycine max GLYMA13G07475 I 0.000
GLYMA18G51581 Glycine max GLYMA18G51581 I 0.000
GLYMA19G05921 Glycine max GLYMA19G05921 I 0.000
GLYMA20G28670 Glycine max GLYMA20G28670 I 0.000
Gorai.001G200400 Gossypium raimondii Gorai.001G200400 I 0.000
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I 0.000
Gorai.008G186800 Gossypium raimondii Gorai.008G186800 I 0.000
GSMUA_Achr2G21050_001 Musa acuminata GSMUA_Achr2G21050_001 I 0.000
GSMUA_Achr2G22480_001 Musa acuminata GSMUA_Achr2G22480_001 I 0.000
LPERR08G12880 Leersia perrieri LPERR08G12880 I 0.000
Lus10021713.g Linum usitatissimum Lus10021713.g I 0.000
Lus10035055.g Linum usitatissimum Lus10035055.g I 0.000
MDP0000173048 Malus domestica MDP0000173048 I 0.000
MDP0000219838 Malus domestica MDP0000219838 N 0.000
MDP0000224810 Malus domestica MDP0000224810 N 0.000
MDP0000272980 Malus domestica MDP0000272980 I 0.000
mgf019480m Mimulus guttatus mgf019480m I 0.000
mgf022233m Mimulus guttatus mgf022233m I 0.000
mgf024687m Mimulus guttatus mgf024687m I 0.000
mgf026636m Mimulus guttatus mgf026636m I 0.000
MLOC_4614 Hordeum vulgare MLOC_4614 I 0.000
MTR_1g103380 Medicago truncatula MTR_1g103380 I 0.000
MTR_6g017055 Medicago truncatula MTR_6g017055 I 0.000
MTR_7g018500 Medicago truncatula MTR_7g018500 I 0.000
OPUNC08G13710 Oryza punctata OPUNC08G13710 I 0.000
OPUNC09G08520 Oryza punctata OPUNC09G08520 I 0.000
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.000
orange1.1g039323m.g Citrus sinensis orange1.1g039323m.g I 0.000
ORGLA08G0137200 Oryza glaberrima ORGLA08G0137200 I 0.000
Pavir.Bb02154 Panicum virgatum Pavir.Bb02154 I 0.000
PGSC0003DMG400000823 Solanum tuberosum PGSC0003DMG400000823 I 0.000
PGSC0003DMG400003362 Solanum tuberosum PGSC0003DMG400003362 I 0.000
PGSC0003DMG400004054 Solanum tuberosum PGSC0003DMG400004054 N 0.000
PGSC0003DMG400005705 Solanum tuberosum PGSC0003DMG400005705 I 0.000
PGSC0003DMG400007467 Solanum tuberosum PGSC0003DMG400007467 I 0.000
PK12240.1 Cannabis sativa PK12240.1 D 0.000
PK19717.1 Cannabis sativa PK19717.1 D 0.000
Pm015499 Prunus mume Pm015499 I 0.000
Pm029002 Prunus mume Pm029002 I 0.000
Pm030202 Prunus mume Pm030202 I 0.000
POPTR_0008s11470 Populus trichocarpa POPTR_0008s11470 I 0.000
POPTR_0010s14030 Populus trichocarpa POPTR_0010s14030 I 0.000
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.000
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.000
POPTR_0017s13980 Populus trichocarpa POPTR_0017s13980 I 0.000
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.000
PRUPE_ppa016240mg Prunus persica PRUPE_ppa016240mg I 0.000
PRUPE_ppa027156mg Prunus persica PRUPE_ppa027156mg I 0.000
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I 0.000
SapurV1A.0304s0080 Salix purpurea SapurV1A.0304s0080 I 0.000
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.000
SapurV1A.0682s0140 Salix purpurea SapurV1A.0682s0140 I 0.000
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I 0.000
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I 0.000
Si033183m.g Setaria italica Si033183m.g I 0.000
Solyc03g045030.1 Solanum lycopersicum Solyc03g045030.1 I 0.000
Solyc03g119770.2 Solanum lycopersicum Solyc03g119770.2 I 0.000
Solyc04g006980.1 Solanum lycopersicum Solyc04g006980.1 I 0.000
Solyc05g009900.1 Solanum lycopersicum Solyc05g009900.1 I 0.000
Solyc06g069240.1 Solanum lycopersicum Solyc06g069240.1 N 0.000
TCM_011874 Theobroma cacao TCM_011874 I 0.000
TCM_012252 Theobroma cacao TCM_012252 I 0.000
TCM_019518 Theobroma cacao TCM_019518 I 0.000
Thhalv10019499m.g Eutrema salsugineum Thhalv10019499m.g I 0.000
Traes_5BL_19F383CC71 Triticum aestivum Traes_5BL_19F383CC71 I 0.000
TRIUR3_20728 Triticum urartu TRIUR3_20728 I 0.000
BRC2 Vitis vinifera VIT_01s0011g02920 I 0.000
TCP1 Vitis vinifera VIT_14s0083g00150 I 0.000